; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014835 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014835
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:8054765..8056381
RNA-Seq ExpressionPI0014835
SyntenyPI0014835
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]1.5e-8974.15Show/hide
Query:  VDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVIRKY
        VD AAGGALADKTPTEA ELI RM ENSQNF NRA ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +K+ KCGVC LVG+PNDKCP+++E+ N++RKY
Subjt:  VDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVIRKY

Query:  DPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET
        DP+ NTYN+ WRDNPNLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPD+ANVS ISLRSGKIL+T
Subjt:  DPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET

Query:  PSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK
        P++ E+KVTS  + L +K+E KEEK+ET+  PS SK
Subjt:  PSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK

KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-9073.06Show/hide
Query:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV
        DRNTVD AAGGALA+K PTEARELISRMA+NSQ F NRASEL+NSLTKEVSELKSQMLNMTTLLTSFVQG  +K+ KC VCGLVG+PNDKCP+++EE N+
Subjt:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK
        ++KYDP+SNTYN  WRDNP LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQP+HANVSVISLRSGK
Subjt:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDE
        IL+TPS+ E+KVTS P+ L +K+E KEEK+ET+  PS S   +D+
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDE

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.1e-9265.16Show/hide
Query:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV
        DRNTVD  AGGALADK PTEARELIS+MAENSQ+FENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +K+ KCGVCGLVG+PNDKCP+++E+ N+
Subjt:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK
        +RKYDPH NTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++ANVS +SLRSGK
Subjt:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDELEELPIGEEFSKQEFDDELRMHEFDDDKKMVEVEMDERLNLD
        IL+TP++ E+K TS P+ L  K+E KEEK+ET+  P  SK  +D+           K  F   L   + +  KK   +EM  ++ ++
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDELEELPIGEEFSKQEFDDELRMHEFDDDKKMVEVEMDERLNLD

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-9074.48Show/hide
Query:  NTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI
        NTVD A G ALADKTPTEARELISRMA+N Q+F NRASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +K+ KCGVCGLVG+ N+KCP+++E+ N++
Subjt:  NTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI
        R+YDPHSNTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQ DHANVS ISLRSGKI
Subjt:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK
        L+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS SK
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-9276.62Show/hide
Query:  RNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI
        RNT+DVAAGGALADKTPTEARELISRMAENS++F NRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLVG+PNDKCP ++E+ N++
Subjt:  RNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI
        R+YDPHSNTYN+ WRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKLPAQPDHANVS ISLRSGKI
Subjt:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLET
        L+TP++ E+K+TS P+ L +K+E KEEK+++
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLET

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein6.4e-9173.06Show/hide
Query:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV
        DRNTVD AAGGALA+K PTEARELISRMA+NSQ F NRASEL+NSLTKEVSELKSQMLNMTTLLTSFVQG  +K+ KC VCGLVG+PNDKCP+++EE N+
Subjt:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK
        ++KYDP+SNTYN  WRDNP LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQP+HANVSVISLRSGK
Subjt:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDE
        IL+TPS+ E+KVTS P+ L +K+E KEEK+ET+  PS S   +D+
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDE

A0A5A7VQ60 Retrotransposon gag protein6.4e-9174.48Show/hide
Query:  NTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI
        NTVD A G ALADKTPTEARELISRMA+N Q+F NRASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +K+ KCGVCGLVG+ N+KCP+++E+ N++
Subjt:  NTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI
        R+YDPHSNTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQ DHANVS ISLRSGKI
Subjt:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK
        L+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS SK
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK

A0A5D3CB46 Retrotransposon gag protein8.9e-9376.62Show/hide
Query:  RNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI
        RNT+DVAAGGALADKTPTEARELISRMAENS++F NRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLVG+PNDKCP ++E+ N++
Subjt:  RNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI
        R+YDPHSNTYN+ WRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKLPAQPDHANVS ISLRSGKI
Subjt:  RKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLET
        L+TP++ E+K+TS P+ L +K+E KEEK+++
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLET

A0A5D3CRR8 Retrotransposon gag protein4.4e-9265.16Show/hide
Query:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV
        DRNTVD  AGGALADK PTEARELIS+MAENSQ+FENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +K+ KCGVCGLVG+PNDKCP+++E+ N+
Subjt:  DRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK
        +RKYDPH NTYN+ WRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++ANVS +SLRSGK
Subjt:  IRKYDPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDELEELPIGEEFSKQEFDDELRMHEFDDDKKMVEVEMDERLNLD
        IL+TP++ E+K TS P+ L  K+E KEEK+ET+  P  SK  +D+           K  F   L   + +  KK   +EM  ++ ++
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSKELHDELEELPIGEEFSKQEFDDELRMHEFDDDKKMVEVEMDERLNLD

E5GBZ4 Retrotransposon gag protein7.1e-9074.15Show/hide
Query:  VDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVIRKY
        VD AAGGALADKTPTEA ELI RM ENSQNF NRA ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +K+ KCGVC LVG+PNDKCP+++E+ N++RKY
Subjt:  VDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVIRKY

Query:  DPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET
        DP+ NTYN+ WRDNPNLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPD+ANVS ISLRSGKIL+T
Subjt:  DPHSNTYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET

Query:  PSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK
        P++ E+KVTS  + L +K+E KEEK+ET+  PS SK
Subjt:  PSS-EEKVTSTPILLENKDEKKEEKLETSALPSTSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAAATACAGTAGACGTTGCAGCAGGAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCAAGGATGGCAGAAAACTCACAAAATTTTGA
AAATAGGGCATCCGAGCTCGACAATTCATTAACCAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAATTGCTAAGTGCGGGGTGTGCGGCCTAGTCGGATATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACTTACAATGCCGATTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCTTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACTAACGCGATTAGCAAGCTAGAAGGCAAAGGCAAACTTC
CGGCTCAGCCTGATCATGCTAATGTAAGTGTCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAA
AATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTGCTCTACCATCTACTTCTAAAGAATTGCATGATGAATTAGAAGAATTGCCTATTGGTGAAGAATTTTCTAA
ACAAGAATTTGATGATGAGCTTCGTATGCATGAGTTTGATGACGATAAAAAGATGGTAGAAGTAGAAATGGATGAAAGATTAAATCTTGATGGAAATAATACTGACAATC
TTTTCTTTTCTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAAATACAGTAGACGTTGCAGCAGGAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCAAGGATGGCAGAAAACTCACAAAATTTTGA
AAATAGGGCATCCGAGCTCGACAATTCATTAACCAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAATTGCTAAGTGCGGGGTGTGCGGCCTAGTCGGATATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACTTACAATGCCGATTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCTTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACTAACGCGATTAGCAAGCTAGAAGGCAAAGGCAAACTTC
CGGCTCAGCCTGATCATGCTAATGTAAGTGTCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAA
AATAAAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTGCTCTACCATCTACTTCTAAAGAATTGCATGATGAATTAGAAGAATTGCCTATTGGTGAAGAATTTTCTAA
ACAAGAATTTGATGATGAGCTTCGTATGCATGAGTTTGATGACGATAAAAAGATGGTAGAAGTAGAAATGGATGAAAGATTAAATCTTGATGGAAATAATACTGACAATC
TTTTCTTTTCTCCCTAG
Protein sequenceShow/hide protein sequence
MDRNTVDVAAGGALADKTPTEARELISRMAENSQNFENRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGYPNDKCPDLVEEANVIRKYDPHSN
TYNADWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILETPSSEEKVTSTPILLE
NKDEKKEEKLETSALPSTSKELHDELEELPIGEEFSKQEFDDELRMHEFDDDKKMVEVEMDERLNLDGNNTDNLFFSP