; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014841 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014841
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionexosome complex exonuclease RRP46 homolog
Genome locationchr03:3474392..3479541
RNA-Seq ExpressionPI0014841
SyntenyPI0014841
Gene Ontology termsGO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0006259 - DNA metabolic process (biological process)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0004540 - ribonuclease activity (molecular function)
GO:0004536 - deoxyribonuclease activity (molecular function)
GO:0004527 - exonuclease activity (molecular function)
GO:0042802 - identical protein binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150286.1 exosome complex exonuclease RRP46 homolog [Cucumis sativus]4.0e-13097.53Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEE+KMKASVHLVFPNAPVSVVPEGSTQ VGEP+EHGIITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLR+SLQPQLPM+SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

XP_008445020.1 PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis melo]5.8e-12996.71Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEE+KMKASVHLVFPN PVSVVPEGSTQ VGEP+EHG+ITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLR+SLQPQL MDSSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

XP_022951618.1 exosome complex exonuclease RRP46 homolog [Cucurbita moschata]1.8e-12593Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT+NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EEQKMKASVHLVFPN+PVSV+PEGSTQ  GEP+E+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLR+SLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

XP_023002484.1 exosome complex exonuclease RRP46 homolog [Cucurbita maxima]3.9e-12593Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT+NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EEQKMKASVHLVFPN+PVSV+PEGSTQ  GEP+E+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLR+SLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

XP_023538111.1 exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo]1.9e-12492.18Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        ME+DRDDGRT+NQLRPLACSCNVLNRA+GSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EEQKMKASVHLVFPN+PVSV+PEGSTQ  GEP+E+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLR+SLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ9 Uncharacterized protein2.0e-13097.53Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEE+KMKASVHLVFPNAPVSVVPEGSTQ VGEP+EHGIITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLR+SLQPQLPM+SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

A0A1S3BB90 exosome complex exonuclease RRP46 homolog2.8e-12996.71Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEE+KMKASVHLVFPN PVSVVPEGSTQ VGEP+EHG+ITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLR+SLQPQL MDSSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

A0A5A7VGL5 Exosome complex exonuclease RRP46-like protein2.8e-12996.71Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEE+KMKASVHLVFPN PVSVVPEGSTQ VGEP+EHG+ITSVT
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAATTKMSAFLR+SLQPQL MDSSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

A0A6J1GI69 exosome complex exonuclease RRP46 homolog8.5e-12693Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT+NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EEQKMKASVHLVFPN+PVSV+PEGSTQ  GEP+E+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLR+SLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

A0A6J1KQK5 exosome complex exonuclease RRP46 homolog1.9e-12593Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDRDDGRT+NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTSI+VQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EEQKMKASVHLVFPN+PVSV+PEGSTQ  GEP+E+GIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
        QGAMSVDDYIHCLERGRAAT KMSAFLR+SLQPQLP DSSK G
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

SwissProt top hitse value%identityAlignment
Q84T68 Exosome complex exonuclease RRP46 homolog4.0e-8064.29Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        ME  R DGR  NQLRP +C+ N L+RAHGSA W+QGDT VLAAVYGPK GT+K ENPEKASIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT +PNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+ +DG+LLPCAINA CAALV AGIPLKHLAVAI C + E+G VILD  K EEQ++K+  HLVFPN+  S   +   Q   E  E G+ITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMD
         G MS +DY  C+ERG AA++++S F+R +LQ Q P D
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMD

Q9CRA8 Exosome complex component RRP468.2e-3336.07Show/hide
Query:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG
        LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  G  E+  E +++ T +++ +   +P T+ ++++QV+ D G
Subjt:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG

Query:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVTQGAMSVDDYIHCL
        +LL C +NA+C ALVDAG+P++ L   ++C L  +G ++LDPT  +E++ +A +     +A                 E  ++ S T+G  S  +   CL
Subjt:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVTQGAMSVDDYIHCL

Query:  ERGRAATTKMSAFLRKSLQ
           +AA+  +  F R+SLQ
Subjt:  ERGRAATTKMSAFLRKSLQ

Q9LX74 Exosome complex exonuclease RRP46 homolog5.7e-10374.9Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+ + GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF RK+ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

Q9NQT4 Exosome complex component RRP462.1e-3336.07Show/hide
Query:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG
        LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  G  E+  E +++ T +++ + T +P T+ ++++QV+ D G
Subjt:  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDG

Query:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVTQGAMSVDDYIHCL
        +LL C +NA+C ALVDAG+P++ L   ++C L  +G ++LDPT  +E++ +A +                     + +E  ++ S T+G  S  +   CL
Subjt:  ALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVTQGAMSVDDYIHCL

Query:  ERGRAATTKMSAFLRKSLQ
           +AA+  +  F R+SLQ
Subjt:  ERGRAATTKMSAFLRKSLQ

Q9SP08 Exosome complex component RRP41 homolog7.7e-1530.64Show/hide
Query:  RDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLER----------ECEMILKRTLQSICIL
        R DGR  N++R +     V+++A GSA +  G+TKV+AAVYGP+    K++  +     V+ +    Q    +R          E  +++++T+++  + 
Subjt:  RDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLER----------ECEMILKRTLQSICIL

Query:  TTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASV
           P++   I +QV+  DG      INA+  AL DAGIP++ LAV+ S     N   +LD   +E+    A V
Subjt:  TTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASV

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.9Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+ + GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF RK+ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.9Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+ + GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF RK+ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

AT3G46210.3 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.9Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+ + GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF RK+ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

AT3G46210.4 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.9Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+ + GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF RK+ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG

AT3G46210.5 Ribosomal protein S5 domain 2-like superfamily protein4.1e-10474.9Show/hide
Query:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT
        MEIDR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA  EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNT
Subjt:  MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT

Query:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT
        TTS+I+QV+HDDG+LLPCAINA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+PEGS+ + GEP+EHGIITS+T
Subjt:  TTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVT

Query:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG
         G MSVDDY  C+E GRAAT  +SAF RK+ Q      SSKAG
Subjt:  QGAMSVDDYIHCLERGRAATTKMSAFLRKSLQPQLPMDSSKAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAGACAGAGATGATGGTCGTACTTCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTGA
TACGAAGGTTCTTGCTGCAGTCTATGGACCTAAAGCGGGCACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCCAAGACAGGGCAAATTG
GAAAACTGGAAAGGGAGTGTGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTTATTCAT
GATGATGGAGCTCTTCTTCCTTGTGCTATTAATGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGTTGCGATTTCCTGTTGTTTGTCTGA
GAATGGATATGTTATTTTGGATCCAACCAAGATAGAGGAGCAGAAAATGAAGGCATCTGTGCATTTGGTATTCCCAAACGCACCTGTCTCAGTAGTTCCTGAAGGATCTA
CACAAAGTGTAGGTGAACCAATGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGTGGATGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACT
ACAAAAATGTCTGCTTTTCTGAGGAAAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTATTTTTCAACTATACCTAATTAAGGAAGGAAAAAGACAGTCTTACCCTAGTCTCTTATTCTCCTTCTCCGATTATCCACGGACTCGGCGGCGGCACCCCAAAATCT
CTCCGTCTCTCTTGTTTCTCTCCTCCGCCGTCTCTCTTTCTCTCCCTAGTATTTCCTTTCTCCTCTCTCTTCACCCGGCTCTTTACAGAACTTCAGCGCCTTCCTCGCTC
CATCGCAAGAAACTTAAACCCGACTGAGTTTGAATTCATCTCAACTTCTTCTTTTCCTTTATAATCTTTCGAAACCACCGGAGAAAAGGGCATGGAGATAGACAGAGATG
ATGGTCGTACTTCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTGATACGAAGGTTCTTGCTGCA
GTCTATGGACCTAAAGCGGGCACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCCAAGACAGGGCAAATTGGAAAACTGGAAAGGGAGTG
TGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTC
CTTGTGCTATTAATGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGTTGCGATTTCCTGTTGTTTGTCTGAGAATGGATATGTTATTTTG
GATCCAACCAAGATAGAGGAGCAGAAAATGAAGGCATCTGTGCATTTGGTATTCCCAAACGCACCTGTCTCAGTAGTTCCTGAAGGATCTACACAAAGTGTAGGTGAACC
AATGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGTGGATGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACTACAAAAATGTCTGCTTTTC
TGAGGAAAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGATTGGATTCAAGTTCTTCTACAACAAAATCAGGCTGGTAAGGTACCGTTTATTGTATG
ATTTATGTTTTTGCAACACCAAATCCATGCTAGTTGAGTCTTTCATGGCTTTTTGTATGCCGGAGCTGTAACAGAGCATCGTTCAAAGTGGATTTGGTTGGTGCATTGTA
CGTTTATAAACATGCTCTTAAGCATTTAGAAATTGTGGAATGACTTGTGTAAACATGCTCCTTTTTTAGCATGTTCAAAATGGTTGGCATTTTCATAGGCAGAAGAAAAC
ACTAGGAAGTCGTTGTAAACATGCTTTTAAGCATTTAGAAAGTAGTTCCAGAGGAACAAACTCTCTAAGACTTTTAAAACTTTCCCCTCGCACATAAACTACTTAACACA
GTTTTTTATTAGTTAAGAACAAAATTACACTTAACAACCCACCCCCACCCTTCCACTACATCCAACCAAAAGTTCTAATTCATAAACACAAACTGCATCAACTGAAGCTT
AAACTTAACAGACTCCAAAATGAAATCTAATAGCCATCTTCCTCCCTAGATAGAGGGACATGGGATCTTTGAATGAGAAAGTTTTCATAGATGAATCCAGCAAGCCCACC
ACCAATAAGAGGCCCAACCCAGTAAACCCAATGGTCAGTCCAGTCTCCAGCCACAAAAGCAGGCCCAAATGATCTTGCTGGGTTCATTGAAGCTCCTGAAAAAGCTCCAC
CAGCCAAGATGTTGGCCCCCACCACAAACCCAGTCAGCAATGGACCCAGTCCATCGAGAGCCCCCTTTTTTGGGTCAACAATTGTACCATACACAGTGAAAAGCAAGGAG
AAGGTCAGAATAATCTCCCATATCACTCCCTGAAGATACCCAACCCCACTTGCTAATGTATGAATTGGAGTGACCTGCAAAAGCAAACAGAAAAAATTACATTGAAAGGA
AACATTTTACTCCAAACTATATTGTTCATTCAACCATAAGATGTGGTTGCTACACACTAACCACCTTTAGATGTAGATTTAAAAATCTGTATGCTCTCTAGTAACTCTAA
TGTAAATTTAAGGATGTCTCTCATACGTCCAACTCTGAAAAACTGTTAGCTACATTGTGGGTGCTTCATTGAACAATCGCTTTTATAGTTGGATAGAGAAAAGAATATAC
TCACCAAGCCTCCGGTGAGGTACGTTAACAAGAAGCTGGCAGCTGAAGCTGCTAGCAACTGAACGATCCAATATAGAGCGGATCGAATGACTGTGATGTGGCCACCGAAA
AGTAGACCAAGAGTGACAGCAGGGTTGAGGTGGCCACCGGAAATGTGGCCAGTAGAGATCATCACAGCCACAACAAACGCATGTGCAACTGCAACGGCGAATAAACCGAC
GAGTGCGTTTGCCAATAACGCATCTAAATCACATAGAAAGAAAAACAATAAATATGTCATTCCCAATATACAATCAAGCTGTCTCAAGAATATTTTTTTTTTAAAAAAAG
GACTAGATCAGCAGAGAAACTTACTGGCAGCCATGGCTGATCCTACACCAGCAAAGACGAAAAGAAAAGTGACAATGAACTCGACGATGAGGGCTCGGATGCAATCAGGC
TGGGAGGCCTCGTGGATGCTTCCAATTGCAATTCTGGCCATCGATATTCCGGCGAGTTCAAGGACTGAACTACAAGAAGCTTGGAATGGAGTTTGGTTGGCAATTTTTTG
AAGAAAACTAAGTGCGATTTTATAAGCAATTCATCATGTAGGCAAATGGTAAGTATGATGACATATTATTATGCCACGTAAGTAAATTACATTTGTGTTCGTTGACCTGA
ACTGTATTTACGGGTTGTGCCATCCAATTATTGAAGTAAATAAAGGGGAAAGCAATGGCCTTGAATTTT
Protein sequenceShow/hide protein sequence
MEIDRDDGRTSNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIH
DDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEQKMKASVHLVFPNAPVSVVPEGSTQSVGEPMEHGIITSVTQGAMSVDDYIHCLERGRAAT
TKMSAFLRKSLQPQLPMDSSKAG