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PI0014864 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014864
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:679075..683824
RNA-Seq ExpressionPI0014864
SyntenyPI0014864
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]3.1e-2180.28Show/hide
Query:  MPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH
        MPPP A  +VINHNDNQ EGDGSDGLDDDQVTLL E RR GH VVR KGRGRAYQNIQRRAQQEAPQ +++
Subjt:  MPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH

KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]8.6e-3284.27Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD
        MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR +GRGRAYQNIQRRAQQEA Q +
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD

KAA0047036.1 uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]4.3e-3179.12Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH
        MEALTDRL+RLEIENRARERMPPPLA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR +G G+AYQNIQRR QQE PQ++++
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH

TYK09709.1 uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]8.6e-3284.27Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD
        MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR +GRGRAYQNIQRRAQQEA Q +
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD

TYK15114.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]6.0e-1749.26Show/hide
Query:  PRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQHEVENEA---QQAHTNSSKEENEAHVEHSWKNFPNQTNQVTIIMPQGPMTRAKAKRLQDGLN----
        PRR G   V  K    AY+ +  R   ++      E EN+     +A+TNS+KEENE H E+SW N   QTNQ TIIM QG MT+A+AKR +D LN    
Subjt:  PRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQHEVENEA---QQAHTNSSKEENEAHVEHSWKNFPNQTNQVTIIMPQGPMTRAKAKRLQDGLN----

Query:  AKFLAFNDKLQQLEFQELFGHPKVIMNLEIQIHSHL
        A+F  FN   ++LE QE  GHP++IMNLEI+IHSHL
Subjt:  AKFLAFNDKLQQLEFQELFGHPKVIMNLEIQIHSHL

TrEMBL top hitse value%identityAlignment
A0A5A7T993 Retrotrans_gag domain-containing protein1.5e-2180.28Show/hide
Query:  MPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH
        MPPP A  +VINHNDNQ EGDGSDGLDDDQVTLL E RR GH VVR KGRGRAYQNIQRRAQQEAPQ +++
Subjt:  MPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH

A0A5A7TK52 Retrotrans_gag domain-containing protein4.2e-3284.27Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD
        MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR +GRGRAYQNIQRRAQQEA Q +
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD

A0A5A7TYI0 Uncharacterized protein2.1e-3179.12Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH
        MEALTDRL+RLEIENRARERMPPPLA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR +G G+AYQNIQRR QQE PQ++++
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQH

A0A5D3CHG3 Retrotrans_gag domain-containing protein4.2e-3284.27Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD
        MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLL EPRRVGHGVVR +GRGRAYQNIQRRAQQEA Q +
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVD

A0A5D3CW05 Zinc finger, CCHC-type2.9e-1749.26Show/hide
Query:  PRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQHEVENEA---QQAHTNSSKEENEAHVEHSWKNFPNQTNQVTIIMPQGPMTRAKAKRLQDGLN----
        PRR G   V  K    AY+ +  R   ++      E EN+     +A+TNS+KEENE H E+SW N   QTNQ TIIM QG MT+A+AKR +D LN    
Subjt:  PRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQHEVENEA---QQAHTNSSKEENEAHVEHSWKNFPNQTNQVTIIMPQGPMTRAKAKRLQDGLN----

Query:  AKFLAFNDKLQQLEFQELFGHPKVIMNLEIQIHSHL
        A+F  FN   ++LE QE  GHP++IMNLEI+IHSHL
Subjt:  AKFLAFNDKLQQLEFQELFGHPKVIMNLEIQIHSHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTCTAGCACAACATGTGGTAATTAACCATAATGACAACCA
ATATGAGGGTGATGGTTCTGATGGTTTAGACGATGACCAAGTTACATTACTTAGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAAAGGTCGTGGAAGAGCTT
ATCAAAACATCCAAAGGAGAGCTCAACAAGAAGCACCTCAAGTTGATCAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTAAAGAGGAAAATGAA
GCACATGTTGAACATTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGTGACAATCATTATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAGACTTCAAGATGG
ATTAAATGCTAAATTTTTAGCCTTTAATGACAAGTTGCAACAATTGGAATTTCAAGAGTTATTTGGACACCCAAAAGTCATAATGAATCTAGAAATTCAGATTCATTCAC
ATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTCTAGCACAACATGTGGTAATTAACCATAATGACAACCA
ATATGAGGGTGATGGTTCTGATGGTTTAGACGATGACCAAGTTACATTACTTAGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAAAGGTCGTGGAAGAGCTT
ATCAAAACATCCAAAGGAGAGCTCAACAAGAAGCACCTCAAGTTGATCAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTAAAGAGGAAAATGAA
GCACATGTTGAACATTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGTGACAATCATTATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAGACTTCAAGATGG
ATTAAATGCTAAATTTTTAGCCTTTAATGACAAGTTGCAACAATTGGAATTTCAAGAGTTATTTGGACACCCAAAAGTCATAATGAATCTAGAAATTCAGATTCATTCAC
ATCTTTAA
Protein sequenceShow/hide protein sequence
MEALTDRLDRLEIENRARERMPPPLAQHVVINHNDNQYEGDGSDGLDDDQVTLLREPRRVGHGVVRGKGRGRAYQNIQRRAQQEAPQVDQHEVENEAQQAHTNSSKEENE
AHVEHSWKNFPNQTNQVTIIMPQGPMTRAKAKRLQDGLNAKFLAFNDKLQQLEFQELFGHPKVIMNLEIQIHSHL