; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014866 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014866
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionupstream activation factor subunit UAF30-like
Genome locationchr11:29716161..29725229
RNA-Seq ExpressionPI0014866
SyntenyPI0014866
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148436.1 upstream activation factor subunit UAF30 [Cucumis sativus]2.0e-16494.58Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSED DND+ED
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND
        DEKGKT S K KKR GGGF+KLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF VNSINMFQMNKALSKHIWPLESND
Subjt:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND

Query:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
        VIPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPLPLS+ALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
Subjt:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI

Query:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        ICDERLKELFDVDSFNGFTVSKLLATHFIK K
Subjt:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK

XP_008457882.1 PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]3.5e-16996.99Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEV+QEDGDENLKMETEDGDSED DNDDED
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND
        DEKGKT S+KAKKR GGGFSKLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF VNSINMFQMNKALSKHIWPLESND
Subjt:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND

Query:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
        VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPLPLSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
Subjt:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI

Query:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        ICDERLKELFDVDSFNGFTVSKLLATHFIK K
Subjt:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]3.8e-15589.64Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE DQEDGDENLK E EDGDSED DNDD D
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN
        DEKGKTGSNK AKKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEKQQ     KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPL LSDALVTFLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKQQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+KTK
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]3.8e-15589.64Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE DQEDGDENLK E EDGDSED DNDD D
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN
        DEKGKTGSNK AKKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEKQQ     KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPL LSDALVTFLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKQQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+KTK
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK

XP_038901460.1 upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]5.5e-16292.86Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELIGRLR+FLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVD+FLQTEHE+AVEEG G CEEVDQE GDENLK E +DGDSED DNDDED
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNK----AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPL
        DEKGK GSNK     KKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIR  NLQDPSNRRNILCD+ LKALF VNSINMFQMNKALSKHIWPL
Subjt:  DEKGKTGSNK----AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
        ESNDVIPA SSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPL LSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD
Subjt:  ESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSD

Query:  KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        KRRIICDERLKELFDVDSF+GFTVSKLLATHFIKTK
Subjt:  KRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein9.7e-16594.58Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELI RLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKK FIREQVDLFLQTEHEKAV+EGY HCEEV QEDGDENLKMETEDGDSED DND+ED
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND
        DEKGKT S K KKR GGGF+KLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF VNSINMFQMNKALSKHIWPLESND
Subjt:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND

Query:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
        VIPAKSSQKEK QKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPLPLS+ALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
Subjt:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI

Query:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        ICDERLKELFDVDSFNGFTVSKLLATHFIK K
Subjt:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK

A0A1S3C766 upstream activation factor subunit UAF30-like1.7e-16996.99Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEV+QEDGDENLKMETEDGDSED DNDDED
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND
        DEKGKT S+KAKKR GGGFSKLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF VNSINMFQMNKALSKHIWPLESND
Subjt:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND

Query:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
        VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPLPLSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI
Subjt:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRI

Query:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        ICDERLKELFDVDSFNGFTVSKLLATHFIK K
Subjt:  ICDERLKELFDVDSFNGFTVSKLLATHFIKTK

A0A5D3CU37 Upstream activation factor subunit UAF30-like2.7e-14696.59Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEV+QEDGDENLKMETEDGDSED DNDDED
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND
        DEKGKT S+KAKKR GGGFSKLCSLSPQLQEFIGA EMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALF VNSINMFQMNKALSKHIWPLESND
Subjt:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND

Query:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQD
        VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSARE+KRQKKGKSGFLAPLPLSDALV FLGTGEDALPRSDVVKRMWDYIKQNNLQ+
Subjt:  VIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQD

A0A6J1EMX5 upstream activation factor subunit UAF30-like1.8e-15589.64Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE DQEDGDENLK E EDGDSED DNDD D
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN
        DEKGKTGSNK AKKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQKEKQQ     KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPL LSDALVTFLGTGE AL RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQKEKQQ-----KEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        SDKRR+ICDE+LKELFDV+SF+GFTVSKLLATHF+KTK
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK

A0A6J1I6I7 upstream activation factor subunit spp27-like7.2e-15288.17Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE DQEDGDENLK E EDGDSED DND  D
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN
         EKGK GSNK AKKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNK-AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQK-----EKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP
        DVIPAKSSQK     EKQ+KEKQPKEK QKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPL LSDALVTFLGTGE++L RSDVVKRMWDYIKQNNLQDP
Subjt:  DVIPAKSSQK-----EKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDP

Query:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        SDKRR+ICDE+LKELFDVDSF+GFTVSKLLATHF+KTK
Subjt:  SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.7e-0928.11Show/hide
Query:  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQV-DLFLQT--EHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGKTG
        ++  L   D  T +   VR+ LEE   +DLS  K+ +   +   F +T    EK   E      +   +   EN   E +      R   ++ +E GK  
Subjt:  LRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQV-DLFLQT--EHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGKTG

Query:  SNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSS
         N  +       +K   LSP+L EF+G  +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  + +   +  
Subjt:  SNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSS

Query:  QKEKQQKEKQPKEKPQK
         +E       PK++ ++
Subjt:  QKEKQQKEKQPKEKPQK

Q05024 Protein TRI12.0e-1031.12Show/hide
Query:  VRRKLEEDFGIDLSDKKRFIREQV-DLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGK--TGSNKAKKRGGGGFSKLCS
        VR+ L+  + ++L  +++ I E + + F   +    V          DQE    +L+++ E    E+R        KGK  + S + KK+     S   S
Subjt:  VRRKLEEDFGIDLSDKKRFIREQV-DLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGK--TGSNKAKKRGGGGFSKLCS

Query:  -----LSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKE
             LS  LQ+F+G+ E+ RT+VVK +W +I+E++LQ+P +RR ILCDE ++ +F    + MF MNK L+KH++    ++++  +  QK+  +KE
Subjt:  -----LSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKE

Q08747 Upstream activation factor subunit UAF301.3e-0931.6Show/hide
Query:  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGKTGSNKAKKR
        L + DL T TT  VR  L+E + ID+  + + I + +   L    E+   E     E++ +E+    +++  E   S+    ++++D + K G++  KK+
Subjt:  LRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGKTGSNKAKKR

Query:  GGGGFSKL----CSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKE
        G    S +     +LS  L   +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ +    S NMF+M+K L+ H+         P K S   
Subjt:  GGGGFSKL----CSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKE

Query:  KQQKEKQPKEKP
           +E + KEKP
Subjt:  KQQKEKQPKEKP

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein9.3e-6747.52Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED
        MVSDS+L+ +LR+ LR+SDL TTT A VRR+LE  FG++L+DKK F+REQ+D FL+++   A+ E      + +QE+ D N       GD  D +  + D
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDED

Query:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND
        D+K +    KAKKR GGGF+K+C LSPQL++F+G  ++ARTEVVK++W +IRE++LQDP+NRRNILCDE L +LF V +INMFQMNKAL+KHIW L   D
Subjt:  DEKGKTGSNKAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESND

Query:  VI-------PAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKS---------GFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWD
                     +  E+ +K+ + +E  +   ++  +EED     R+ K++K  KS         GF     LS  L  F GT +  L R++VVK +W 
Subjt:  VI-------PAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKS---------GFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWD

Query:  YIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATH
        YIK+NNLQDPSDKR IICDE L+ LF V+S N F ++K LA H
Subjt:  YIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATH

AT2G35605.1 SWIB/MDM2 domain superfamily protein3.5e-1342.86Show/hide
Query:  KTGSNKAKKRG--GGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFS-VNSINMFQMNKALSKH
        K  S+   K G  G G  K+  +S  L  FIG  E++RT  VK++W +I+ NNLQ+P N+R ILCDE LK +FS  +++   +++K LS+H
Subjt:  KTGSNKAKKRG--GGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFS-VNSINMFQMNKALSKH

AT3G03590.1 SWIB/MDM2 domain superfamily protein1.6e-1342.74Show/hide
Query:  KQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSF
        K+P  KP+ K + + K + SD  A++  R     +G     P+S  L  FLGTGE +  R+D +K +W YIK ++LQ+P+DKR I CDE LK +F+    
Subjt:  KQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSF

Query:  NGF-TVSKLLATHFIKT
         GF  +SKLL+ HF+KT
Subjt:  NGF-TVSKLLATHFIKT

AT3G19080.1 SWIB complex BAF60b domain-containing protein8.4e-6837.71Show/hide
Query:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDND---
        MVSD +L+ RLR+ L +SDLNT T A VRR+LE DFG+DL+DKK +IR+Q+D FL  E   AVE+      +V++    + +K E E GD ED D D   
Subjt:  MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDND---

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------DEDDEKGKTGSN--------------------------------------KAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIR
               +ED+++   G++                                      K K++GGGGF+K+CSLSP+LQ F G  E+ARTEVVK LW +I+
Subjt:  -------DEDDEKGKTGSN--------------------------------------KAKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIR

Query:  ENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGF
        ENNLQDP+++R+I+CDE  ++LF V SINMFQMNK L+KHIWPLE N               E    + P+  +QK   + DS++   ++K+QKK     
Subjt:  ENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGF

Query:  LAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK
        LAPLPLSDALV FLG GE++L R+DVVKR+W+YI  N+LQDPSDKRR+ICDE+LKELF+VDSF   +VSKLL  HFIK +
Subjt:  LAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKTK

AT4G22360.1 SWIB complex BAF60b domain-containing protein1.5e-3736.07Show/hide
Query:  KKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK
        +K G GG +K+C +SP+L+  +G P + RTE+V+QLW +IR+NNLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+KHI PL+     P+K S + K
Subjt:  KKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK

Query:  QQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFD
        + K                    ++   + E  +    +   + + LS+ L  F GTGE  +   ++++R+W+YIK NNL+DP +   I CDE+L++L  
Subjt:  QQKEKQPKEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFD

Query:  VDSFNGFTVSKLLATHFIK
         +S +   ++++L  H  K
Subjt:  VDSFNGFTVSKLLATHFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCGACTCGGAGCTCATCGGCCGGCTCCGAGACTTTCTTCGCAATTCCGACCTCAATACCACCACTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTTGG
CATTGATTTGTCTGATAAGAAGCGGTTTATTAGGGAACAGGTCGACTTGTTCCTCCAGACTGAACATGAGAAAGCCGTGGAAGAAGGTTATGGCCATTGTGAGGAAGTCG
ACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGAGGATGGAGATAGTGAAGACAGAGATAACGACGATGAAGATGATGAAAAGGGTAAAACGGGTTCTAACAAG
GCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCCCCACAACTGCAGGAATTTATTGGAGCACCTGAAATGGCAAGGACTGAGGTTGTTAAACAACT
ATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTAGTGTCAATTCCATCAACATGTTTC
AAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGATGTTATTCCAGCCAAATCAAGTCAGAAAGAAAAGCAACAAAAGGAGAAGCAGCCAAAGGAG
AAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCC
ACTTTCGGATGCTCTGGTGACATTTCTTGGTACTGGAGAGGATGCATTGCCTCGCTCCGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGACC
CTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAAAGAACTCTTTGACGTCGATTCCTTTAATGGGTTCACTGTTTCGAAACTCCTGGCCACGCATTTTATAAAG
ACGAAATAG
mRNA sequenceShow/hide mRNA sequence
TTCTTCTCCTTCTTCTTCCCCAATCTCCCATCTGTTCTTCACGCAAAGCTTTTTCTTATTCAAAGCCAAAGCCAAAGGCACACACCACACGCCACGGACACTGTGCCCTC
AGCTCCAATTCCTACCCAATCTTCCAGTTTTTTTTCCCTTCTTCCATTAAAAATTGTGGATTACCCAACAATGGTTTCCGACTCGGAGCTCATCGGCCGGCTCCGAGACT
TTCTTCGCAATTCCGACCTCAATACCACCACTACTGCTATCGTCCGCCGTAAGCTCGAGGAAGACTTTGGCATTGATTTGTCTGATAAGAAGCGGTTTATTAGGGAACAG
GTCGACTTGTTCCTCCAGACTGAACATGAGAAAGCCGTGGAAGAAGGTTATGGCCATTGTGAGGAAGTCGACCAGGAAGATGGAGATGAAAATTTGAAGATGGAAACGGA
GGATGGAGATAGTGAAGACAGAGATAACGACGATGAAGATGATGAAAAGGGTAAAACGGGTTCTAACAAGGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTA
GCCTTTCCCCACAACTGCAGGAATTTATTGGAGCACCTGAAATGGCAAGGACTGAGGTTGTTAAACAACTATGGAACCACATTAGAGAGAACAATTTGCAAGACCCCAGT
AATAGAAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTAGTGTCAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGA
ATCAAATGATGTTATTCCAGCCAAATCAAGTCAGAAAGAAAAGCAACAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGACAGAAGCAAGGGAAAGAAGAAG
ATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCCACTTTCGGATGCTCTGGTGACATTTCTTGGTACTGGAGAG
GATGCATTGCCTCGCTCCGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAATAATTTGTGACGAGAGGCTAAA
AGAACTCTTTGACGTCGATTCCTTTAATGGGTTCACTGTTTCGAAACTCCTGGCCACGCATTTTATAAAGACGAAATAGTAAGTGTCTCCTACACATTGTCTTTGTTGAT
GCAAGAGAATCTAGAATTTTGCTTGAGATAGTTTTAGTGGTCTCTTCTTTGTGTGTTATTCTCTGGAATTCACCAACAAGGCAATGGAAAATCTGTTTTTGTTGACCTTG
TGTTATCTCTTCTCTTTGGTGGGTGGTCTGTTGCAAAATCTTTCAGAATTAATTGGACTAACCTTATCAATTCTTCTATACTTCCCTTAGCTTTCAAGTAGCTGCTTAAG
TTCTTAAAAAAGAAACAAAAAAAAAAGTCCCTCATATTTGGCTAACTACATTGGTGTTGTAATTATCACTATTTTGTTTTATTTTTGTTTTGTTCATTGCTTACCTAACT
AAGCAGTTCTTTCCCTCATTCTTCTCTCCCCAAAACTTCTATGAAAGATTCTTCATTGAAGAATGTTGTTAACGCCTGAGAGATTAAAAAGGGTGGGAAGAAACTGGTTA
GGGGTAACTTTCATTTCATGTGGAAAGATAACCATTTCCTTCTCTTATTGAGCTTTTTTGTTTTTCCCCCTCCTCTTCTTCATCGGACATGTTTAAATACTTAGAAGGAC
ATTAGAAGGTCAATCCATGCATGCTGTTCTTCTAATCTTTACTAATTATAGCATGAAGGAAACAATGAATGGGAGGTTGAAGCAATTTAGTGGGTAGTTTGACATAGGGG
GATCGAACTATACTTTTGGATTTGTTAGGTGATCTTTATATTTTATTTCAGGTTTATTTTTTTATCATCTTTTTTTTAGTATAATAATTGTGGGAATATGTGA
Protein sequenceShow/hide protein sequence
MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHEKAVEEGYGHCEEVDQEDGDENLKMETEDGDSEDRDNDDEDDEKGKTGSNK
AKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFSVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKE
KPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLPLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIK
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