CuGenDBv2

Gene ID	PI0014893
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	E3 ubiquitin-protein ligase CHIP
Genome location	chr04:17242798..17244815
RNA-Seq Expression	PI0014893
Synteny	PI0014893
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process) GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process) GO:0045862 - positive regulation of proteolysis (biological process) GO:0071218 - cellular response to misfolded protein (biological process) GO:0005737 - cytoplasm (cellular component) GO:0051087 - chaperone binding (molecular function) GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144393.1 E3 ubiquitin-protein ligase CHIP isoform X1 [Cucumis sativus]

1.1e-22

66.67

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGVPLSG AKQAEILRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDW KVEEDCRRAIQLDSSSVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

XP_022159463.1 E3 ubiquitin-protein ligase CHIP [Momordica charantia]

5.5e-22

63.54

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAAKQAE+LRK G   F++  L   ++          A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

XP_022963575.1 E3 ubiquitin-protein ligase CHIP-like [Cucurbita moschata]

1.6e-21

64.58

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

XP_023553676.1 E3 ubiquitin-protein ligase CHIP-like isoform X1 [Cucurbita pepo subsp. pepo]

1.6e-21

64.58

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

XP_038886937.1 E3 ubiquitin-protein ligase CHIP isoform X1 [Benincasa hispida]

1.1e-22

66.67

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAAKQAE+LRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBQ5 Uncharacterized protein

5.3e-23

66.67

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGVPLSG AKQAEILRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDW KVEEDCRRAIQLDSSSVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

A0A6J1DYV8 E3 ubiquitin-protein ligase CHIP

2.7e-22

63.54

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAAKQAE+LRK G   F++  L   ++          A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

A0A6J1HID6 E3 ubiquitin-protein ligase CHIP-like

7.7e-22

64.58

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

A0A6J1HQG3 E3 ubiquitin-protein ligase CHIP-like isoform X1

7.7e-22

64.58

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Query:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPGV LSGAA+QAEILRK G   F++           R    I A+    T+ P VPVYLTNRALCHRKRNDWKKVEEDCRRAIQLD++SVKAHY
Subjt:  MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

A0A6J1K6X7 E3 ubiquitin-protein ligase CHIP-like

1.2e-19

61.86

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Query:  MGPG-VPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        MGPG V LSGAAKQAE+LRK G   F++           R    I A+    T+ P V VYLTNRALCHRKRNDWKKVEEDCRRAIQ+DS+SVK HY
Subjt:  MGPG-VPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

SwissProt top hits

e value

%identity

Alignment

Q5ZHY5 E3 ubiquitin-protein ligase CHIP

1.5e-06

57.14

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Query:  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        PLV VY TNRALC+ K     K   DC+RA++LD  SVKAH+
Subjt:  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

Q9SRS9 E3 ubiquitin-protein ligase CHIP

1.8e-12

48.28

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Query:  AAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        A+  AE L++ G   FK+           R    I A+     + P VP Y TNRALCH KR DW KVEEDCR+AIQL  +SVKAHY
Subjt:  AAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

Q9UNE7 E3 ubiquitin-protein ligase CHIP

1.2e-06

57.14

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Query:  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        PLV VY TNRALC+ K    ++   DCRRA++LD  SVKAH+
Subjt:  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

Q9WUD1 E3 ubiquitin-protein ligase CHIP

2.0e-06

57.14

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Query:  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        PLV VY TNRALC+ K    ++   DCRRA++LD  SVKAH+
Subjt:  PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07370.1 carboxyl terminus of HSC70-interacting protein

1.3e-13

48.28

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Query:  AAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY
        A+  AE L++ G   FK+           R    I A+     + P VP Y TNRALCH KR DW KVEEDCR+AIQL  +SVKAHY
Subjt:  AAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTM-PLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHY

Sequences

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CDS sequence

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ATGGGACCAGGAGTCCCCTTGTCTGGCGCAGCAAAACAGGCTGAGATTCTCAGGAAGAAGGGAACCACTATTTTCAAAAGGGTCGAATTGGAGCTGCCATTGAAGCTTAT
ACCGAGATCGAATCATTTCATTGTGGCGTTCTTGAGCTATTACACTATGCCCCTGGTTCCTGTGTACTTGACGAACCGTGCGTTGTGTCATCGCAAGCGGAATGATTGGA
AGAAGGTGGAGGAGGATTGTCGGAGAGCTATTCAGCTTGATAGCAGTTCTGTAAAGGCACATTACACGTAA

mRNA sequence

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Protein sequence

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MGPGVPLSGAAKQAEILRKKGTTIFKRVELELPLKLIPRSNHFIVAFLSYYTMPLVPVYLTNRALCHRKRNDWKKVEEDCRRAIQLDSSSVKAHYT

PI0014893 (gene) of Melon (PI 482460) v1 genome