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PI0014909 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014909
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr02:8812385..8812831
RNA-Seq ExpressionPI0014909
SyntenyPI0014909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041883.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.6e-5579.05Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSK LSDI KR NTHSR ++ Q FEDTPPFEVAKNIWEQ+SK  KG I+IKENP IDEH S SEHS EE  HPNIMSVMVTDVDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KKVNMLMK VEE DYEIASLKNHIESRDAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

KAA0045440.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.2e-5377.03Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR ++ Q FEDTPPFEVAKNIWE++SK  KG I+IKENP IDEH SSS+ S EE PHPNIMSVMVT+VDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KKVNMLMK VEE DYEIA LKNHIES DAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

KAA0056375.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-5377.7Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR +K Q FEDTPPFEVAKNIWEQ+SK  KG I+IKENP IDEH SSS+ S EE PH NIMSV+VTDVDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KK+NMLMK VEE DYEIA LKNHIESRDAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

KAA0060505.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.9e-5377.03Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR ++ Q FEDTPPFEVAKNIWEQ+SK  KG I+IKENP IDEH SSS+ S E+ PHPNIMSVMVT+VDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        +KVNMLMK VEE DYEIA LKNHIESRDAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-5377.7Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR ++ Q FE TPPFEVAKNIWEQ+SK  KG I+IKENP IDEH SSS+ S EE PHPNIMSVMVT+VDTSE+RMT+ E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KKVNMLMK VEE DYEIA LKNHIES DAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

TrEMBL top hitse value%identityAlignment
A0A5A7TQK6 Retrotransposon gag protein1.5e-5377.03Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR ++ Q FEDTPPFEVAKNIWE++SK  KG I+IKENP IDEH SSS+ S EE PHPNIMSVMVT+VDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KKVNMLMK VEE DYEIA LKNHIES DAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

A0A5A7US25 Ty3-gypsy retrotransposon protein6.9e-5477.7Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR +K Q FEDTPPFEVAKNIWEQ+SK  KG I+IKENP IDEH SSS+ S EE PH NIMSV+VTDVDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KK+NMLMK VEE DYEIA LKNHIESRDAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

A0A5A7V3R7 Ty3-gypsy retrotransposon protein9.0e-5477.03Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR ++ Q FEDTPPFEVAKNIWEQ+SK  KG I+IKENP IDEH SSS+ S E+ PHPNIMSVMVT+VDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        +KVNMLMK VEE DYEIA LKNHIESRDAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

A0A5D3C4W1 Ty3-gypsy retrotransposon protein3.7e-5579.05Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSK LSDI KR NTHSR ++ Q FEDTPPFEVAKNIWEQ+SK  KG I+IKENP IDEH S SEHS EE  HPNIMSVMVTDVDTSE+RM + E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KKVNMLMK VEE DYEIASLKNHIESRDAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

A0A5D3CD55 Ty3-gypsy retrotransposon protein1.2e-5377.7Show/hide
Query:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE
        MTS+ NTSKALSDI KR NTHSR ++ Q FE TPPFEVAKNIWEQ+SK  KG I+IKENP IDEH SSS+ S EE PHPNIMSVMVT+VDTSE+RMT+ E
Subjt:  MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFE

Query:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM
        KKVNMLMK VEE DYEIA LKNHIES DAAES+H HTVKNTDKGK +M
Subjt:  KKVNMLMKAVEESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTAAAGACAACACTTCCAAAGCTCTAAGCGACATTAGCAAGAGGCTAAATACTCACAGCCGCTTAAAGAAGTCTCAATTGTTTGAGGATACGCCACCCTTTGA
GGTCGCAAAGAATATTTGGGAACAACTGTCAAAGTCATCAAAAGGTGAAATTATAATCAAAGAAAACCCTGTAATCGACGAACACATTTCGTCCTCTGAACACTCATGTG
AGGAGACGCCTCACCCAAATATAATGTCAGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAAAGTTTGAAAAGAAGGTTAACATGCTCATGAAGGCAGTT
GAAGAAAGTGATTATGAGATTGCATCTCTTAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAATCATACACACACCGTCAAGAATACTGACAAAGGGAAGACAAT
TATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTAAAGACAACACTTCCAAAGCTCTAAGCGACATTAGCAAGAGGCTAAATACTCACAGCCGCTTAAAGAAGTCTCAATTGTTTGAGGATACGCCACCCTTTGA
GGTCGCAAAGAATATTTGGGAACAACTGTCAAAGTCATCAAAAGGTGAAATTATAATCAAAGAAAACCCTGTAATCGACGAACACATTTCGTCCTCTGAACACTCATGTG
AGGAGACGCCTCACCCAAATATAATGTCAGTTATGGTGACTGACGTGGATACAAGTGAAGATAGAATGACAAAGTTTGAAAAGAAGGTTAACATGCTCATGAAGGCAGTT
GAAGAAAGTGATTATGAGATTGCATCTCTTAAGAATCACATCGAGAGTCGTGATGCTGCTGAATCAAATCATACACACACCGTCAAGAATACTGACAAAGGGAAGACAAT
TATGTAA
Protein sequenceShow/hide protein sequence
MTSKDNTSKALSDISKRLNTHSRLKKSQLFEDTPPFEVAKNIWEQLSKSSKGEIIIKENPVIDEHISSSEHSCEETPHPNIMSVMVTDVDTSEDRMTKFEKKVNMLMKAV
EESDYEIASLKNHIESRDAAESNHTHTVKNTDKGKTIM