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PI0014912 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014912
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:12356530..12357072
RNA-Seq ExpressionPI0014912
SyntenyPI0014912
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047371.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-1844.44Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVP-GNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGE
        +SHP TKGLL+KPFP+YDEL+Y+F +DRATG+ AETF +VGSN P G ++ F   DG N + P +Y+QG  +S  D+   RP     VG  + D RG GE
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVP-GNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGE

Query:  AMMWKLWKSFATPWNMRMTNSRQLQN
             + K +      + +NS +L++
Subjt:  AMMWKLWKSFATPWNMRMTNSRQLQN

KAA0054520.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]8.7e-2960.55Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGEA
        +SH  TKG L+K F YY++LSY+F+KDR  G   ETF DVGSNV G +E F  EDG+NM IP MY+QG  M PKDIMGT+P       +VQAD++GS EA
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGEA

Query:  MMWKLWKSF
         MWKLWKSF
Subjt:  MMWKLWKSF

KAA0062548.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-1860.71Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGN-FEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDR
        QSHP  KGLL+KPFPYYDEL+Y+F +DRATG+ AETF DVGSN PGN ++ F   DG N D P MY+QG  +S  D+  +RP R
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGN-FEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDR

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-1960.24Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNF-EPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPD
        +SHP TKGLL K FPYYD+LSY+F KDRATG R+ETF DVGSNVP  F +  P  D H+ DIP MY+QG  +SP ++ G R +
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNF-EPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPD

XP_008444620.1 PREDICTED: uncharacterized protein LOC103487886 [Cucumis melo]1.4e-1858.23Show/hide
Query:  HPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRP
        HP  K LL+K FPYYDEL+Y+FKKDRATG+  ETFTD+GSN P  +E F   DG++M+IP +Y+QG  MS +D+   RP
Subjt:  HPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRP

TrEMBL top hitse value%identityAlignment
A0A1S3BAQ2 uncharacterized protein LOC1034878866.7e-1958.23Show/hide
Query:  HPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRP
        HP  K LL+K FPYYDEL+Y+FKKDRATG+  ETFTD+GSN P  +E F   DG++M+IP +Y+QG  MS +D+   RP
Subjt:  HPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRP

A0A5A7UGY0 RING-H2 finger protein ATL664.2e-2960.55Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGEA
        +SH  TKG L+K F YY++LSY+F+KDR  G   ETF DVGSNV G +E F  EDG+NM IP MY+QG  M PKDIMGT+P       +VQAD++GS EA
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGEA

Query:  MMWKLWKSF
         MWKLWKSF
Subjt:  MMWKLWKSF

A0A5A7V4P8 Retrotransposon protein8.8e-1960.71Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGN-FEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDR
        QSHP  KGLL+KPFPYYDEL+Y+F +DRATG+ AETF DVGSN PGN ++ F   DG N D P MY+QG  +S  D+  +RP R
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGN-FEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDR

A0A5D3CQ47 Retrotransposon protein1.1e-1844.44Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVP-GNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGE
        +SHP TKGLL+KPFP+YDEL+Y+F +DRATG+ AETF +VGSN P G ++ F   DG N + P +Y+QG  +S  D+   RP     VG  + D RG GE
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVP-GNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGE

Query:  AMMWKLWKSFATPWNMRMTNSRQLQN
             + K +      + +NS +L++
Subjt:  AMMWKLWKSFATPWNMRMTNSRQLQN

A0A5D3DG22 Retrotransposon protein3.9e-1960.24Show/hide
Query:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNF-EPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPD
        +SHP TKGLL K FPYYD+LSY+F KDRATG R+ETF DVGSNVP  F +  P  D H+ DIP MY+QG  +SP ++ G R +
Subjt:  QSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNF-EPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTACAAAATATTTGTATTTTTTTCCACAGAGTCATCCGACAACAAAGGGTCTTTTGAGCAAGCCGTTTCCATACTACGACGAACTGTCCTATATCTTCAAGAA
AGATCGGGCTACAGGACAACGCGCTGAGACATTCACGGATGTCGGTTCGAATGTGCCAGGAAATTTTGAGCCATTTCCAGGTGAAGATGGACACAATATGGACATCCCAA
ACATGTACAACCAGGGACGTCCAATGTCACCCAAGGACATAATGGGAACACGACCTGATCGACGAGTGAGTGTAGGACAAGTTCAAGCGGATAGAAGAGGAAGCGGGGAA
GCCATGATGTGGAAACTATGGAAGTCATTCGCAACGCCATGGAATATGCGAATGACCAACTCAAGGCAATTGCAGAATGACCGAAGGAACAACGAAAAGACGAAAGTAAA
ACCCGTGTGGCAGTCGTTAGTCAATTACAGGAAATCCCTGAACTATCAAGACTTGACAGGGTGCGCTGTATGCGGATACTTATGCAAAACGTGGTCGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTACAAAATATTTGTATTTTTTTCCACAGAGTCATCCGACAACAAAGGGTCTTTTGAGCAAGCCGTTTCCATACTACGACGAACTGTCCTATATCTTCAAGAA
AGATCGGGCTACAGGACAACGCGCTGAGACATTCACGGATGTCGGTTCGAATGTGCCAGGAAATTTTGAGCCATTTCCAGGTGAAGATGGACACAATATGGACATCCCAA
ACATGTACAACCAGGGACGTCCAATGTCACCCAAGGACATAATGGGAACACGACCTGATCGACGAGTGAGTGTAGGACAAGTTCAAGCGGATAGAAGAGGAAGCGGGGAA
GCCATGATGTGGAAACTATGGAAGTCATTCGCAACGCCATGGAATATGCGAATGACCAACTCAAGGCAATTGCAGAATGACCGAAGGAACAACGAAAAGACGAAAGTAAA
ACCCGTGTGGCAGTCGTTAGTCAATTACAGGAAATCCCTGAACTATCAAGACTTGACAGGGTGCGCTGTATGCGGATACTTATGCAAAACGTGGTCGATATGA
Protein sequenceShow/hide protein sequence
MKLTKYLYFFPQSHPTTKGLLSKPFPYYDELSYIFKKDRATGQRAETFTDVGSNVPGNFEPFPGEDGHNMDIPNMYNQGRPMSPKDIMGTRPDRRVSVGQVQADRRGSGE
AMMWKLWKSFATPWNMRMTNSRQLQNDRRNNEKTKVKPVWQSLVNYRKSLNYQDLTGCAVCGYLCKTWSI