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PI0014929 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014929
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:20386088..20386252
RNA-Seq ExpressionPI0014929
SyntenyPI0014929
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050781.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ ++ DE DSTHATTA ++IHYIETSNEWS WRDDL E+MF+EWELH+Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ +D DE DSTHATTA ++IHYIETSNEWS WRDDL E+MFS+WEL +Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

TYK08565.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ ++ DE DSTHATTA ++IHYIETSNEWS WRDDL E+MF+EWELH+Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ +D DE DSTHATTA ++IHYIETSNEWS WRDDL E+MFS+WEL +Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

TYK27175.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1370.37Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ ++ DE DSTHATT  ++IHYIETSNEWS WRDDL E+MFSEWEL +Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

TrEMBL top hitse value%identityAlignment
A0A5A7UB39 Retrotransposon protein1.5e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ ++ DE DSTHATTA ++IHYIETSNEWS WRDDL E+MF+EWELH+Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

A0A5A7VLF4 Putative nuclease HARBI14.4e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ +D DE DSTHATTA ++IHYIETSNEWS WRDDL E+MFS+WEL +Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

A0A5D3CAK2 Retrotransposon protein1.5e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ ++ DE DSTHATTA ++IHYIETSNEWS WRDDL E+MF+EWELH+Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

A0A5D3CKZ1 Putative nuclease HARBI14.4e-1472.22Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ +D DE DSTHATTA ++IHYIETSNEWS WRDDL E+MFS+WEL +Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

A0A5D3DV38 Retrotransposon protein9.7e-1470.37Show/hide
Query:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ
        MTN D+ ++ DE DSTHATT  ++IHYIETSNEWS WRDDL E+MFSEWEL +Q
Subjt:  MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACACTGATGTGATGGAGGACTACGACGAGGGTGATTCGACACACGCAACAACTGCAGGTGAAAACATTCACTACATCGAAACGTCCAATGAATGGAGTCATTG
GAGGGATGATCTGGTCGAGAAGATGTTCAGTGAATGGGAGTTACATGATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAACACTGATGTGATGGAGGACTACGACGAGGGTGATTCGACACACGCAACAACTGCAGGTGAAAACATTCACTACATCGAAACGTCCAATGAATGGAGTCATTG
GAGGGATGATCTGGTCGAGAAGATGTTCAGTGAATGGGAGTTACATGATCAGTAG
Protein sequenceShow/hide protein sequence
MTNTDVMEDYDEGDSTHATTAGENIHYIETSNEWSHWRDDLVEKMFSEWELHDQ