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PI0014935 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014935
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description60S ribosomal protein L18
Genome locationchr05:22198513..22199817
RNA-Seq ExpressionPI0014935
SyntenyPI0014935
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000039 - Ribosomal protein L18e
IPR021131 - Ribosomal protein L18e/L15P
IPR036227 - Ribosomal L18e/L15P superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041394.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa]1.6e-4787.72Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF
        KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQNTV LRGPKN QEA+KHFGPAP VSHSHS+PYVRSKGR F
Subjt:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF

Query:  ERARGKRNSRGYGV
        ERARGKRNSRGYGV
Subjt:  ERARGKRNSRGYGV

TYJ96153.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa]1.2e-4585.96Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF
        KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQNTV LRGPKN QEA+K FGPAP VSHSHS+PYVRS GR F
Subjt:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF

Query:  ERARGKRNSRGYGV
        ERARGKRNSRGYGV
Subjt:  ERARGKRNSRGYGV

XP_008450608.1 PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo]1.0e-4182.76Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFERARGKRNSRGY V
Subjt:  KFERARGKRNSRGYGV

XP_011659839.1 60S ribosomal protein L18-2 [Cucumis sativus]1.0e-4182.76Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFERARGKRNSRGY V
Subjt:  KFERARGKRNSRGYGV

XP_038887726.1 60S ribosomal protein L18-2-like [Benincasa hispida]3.9e-4181.9Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        KGKESKI+  VG I D+ R+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFERARGKRNSRGY V
Subjt:  KFERARGKRNSRGYGV

TrEMBL top hitse value%identityAlignment
A0A0A0LWD1 Ribosomal_L18e/L15P domain-containing protein5.0e-4282.76Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFERARGKRNSRGY V
Subjt:  KFERARGKRNSRGYGV

A0A1S3BPL9 60S ribosomal protein L18-25.0e-4282.76Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFERARGKRNSRGY V
Subjt:  KFERARGKRNSRGYGV

A0A5A7TD77 60S ribosomal protein L18-28.0e-4887.72Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF
        KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQNTV LRGPKN QEA+KHFGPAP VSHSHS+PYVRSKGR F
Subjt:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF

Query:  ERARGKRNSRGYGV
        ERARGKRNSRGYGV
Subjt:  ERARGKRNSRGYGV

A0A5A7U942 60S ribosomal protein L18-25.0e-4282.76Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        KGKESKI+  VG I D+IR+ EVPALK  ALRFT+TAR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFERARGKRNSRGY V
Subjt:  KFERARGKRNSRGYGV

A0A5D3BA35 60S ribosomal protein L18-25.7e-4685.96Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF
        KGKES+IS  VG +ADEIRICEVPALKALR TQTARSRIEKAGWECL FDQLA RAHLGQNTV LRGPKN QEA+K FGPAP VSHSHS+PYVRS GR F
Subjt:  KGKESKIS-FVGKIADEIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKF

Query:  ERARGKRNSRGYGV
        ERARGKRNSRGYGV
Subjt:  ERARGKRNSRGYGV

SwissProt top hitse value%identityAlignment
O22254 Putative 60S ribosomal protein L18-11.0e-3163.79Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL-GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        GK+ KI+  VG + D++RI +VPAL   ALRFT++AR+RI KAG ECL FDQLAL      +NTV LRGPKN +EAVKHFGPAPGV HSH+KPYVR  G+
Subjt:  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL-GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        K E ARG+R SRG+ V
Subjt:  KFERARGKRNSRGYGV

O65729 60S ribosomal protein L18 (Fragment)1.5e-3568.1Show/hide
Query:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        +GKE KI   VG + D+IR+ +VP +K  AL+FT+TAR+RI+KAG ECL FDQLALR  L  +TV LRGPKN +EAVKHFGPAPGV HSH+KPYVRSKGR
Subjt:  KGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        KFE+ARG+R SRG+ V
Subjt:  KFERARGKRNSRGYGV

P42791 60S ribosomal protein L18-21.6e-4074.78Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK
        GKE KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVR+KGRK
Subjt:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK

Query:  FERARGKRNSRGYGV
        FE+ARGKR SRG+ V
Subjt:  FERARGKRNSRGYGV

Q4PM04 60S ribosomal protein L183.2e-3058.62Show/hide
Query:  ERKGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSK
        ++ G+E+ I+  VG + D++R+ +VP L+  ALR T+ AR+RI KAG E L FDQLA++A  G+ TV ++GP+N +EA +HFGPAPGV HSH+KPYVRSK
Subjt:  ERKGKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSK

Query:  GRKFERARGKRNSRGY
        GRKFERARG+R SR Y
Subjt:  GRKFERARGKRNSRGY

Q940B0 60S ribosomal protein L18-38.5e-3972.17Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK
        GK+ KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HS++KPYVR KGRK
Subjt:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK

Query:  FERARGKRNSRGYGV
        FE+ARGKR SRG+ V
Subjt:  FERARGKRNSRGYGV

Arabidopsis top hitse value%identityAlignment
AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein7.2e-3363.79Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL-GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        GK+ KI+  VG + D++RI +VPAL   ALRFT++AR+RI KAG ECL FDQLAL      +NTV LRGPKN +EAVKHFGPAPGV HSH+KPYVR  G+
Subjt:  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL-GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        K E ARG+R SRG+ V
Subjt:  KFERARGKRNSRGYGV

AT2G47570.2 Ribosomal protein L18e/L15 superfamily protein7.2e-3363.79Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL-GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR
        GK+ KI+  VG + D++RI +VPAL   ALRFT++AR+RI KAG ECL FDQLAL      +NTV LRGPKN +EAVKHFGPAPGV HSH+KPYVR  G+
Subjt:  GKESKIS-FVGKIADEIRICEVPAL--KALRFTQTARSRIEKAGWECLKFDQLALRAHL-GQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGR

Query:  KFERARGKRNSRGYGV
        K E ARG+R SRG+ V
Subjt:  KFERARGKRNSRGYGV

AT3G05590.1 ribosomal protein L181.1e-4174.78Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK
        GKE KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HSHSKPYVR+KGRK
Subjt:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK

Query:  FERARGKRNSRGYGV
        FE+ARGKR SRG+ V
Subjt:  FERARGKRNSRGYGV

AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein6.0e-4072.17Show/hide
Query:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK
        GK+ KI+  VG I D++R+ E+PA+K  ALRFT+ AR+RIEKAG ECL FDQLALRA LGQNTV LRGPKN +EAVKHFGPAPGV HS++KPYVR KGRK
Subjt:  GKESKIS-FVGKIADEIRICEVPALK--ALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRK

Query:  FERARGKRNSRGYGV
        FE+ARGKR SRG+ V
Subjt:  FERARGKRNSRGYGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTGAATATGAGTTTCAAAAAAACCCATTTGTTAGTGTTGGGCTTGAAGAACCCGGAAACCCAATGGGTATTTTCTCTTGAAAGTGCACCTGATCGGCTGACCCT
TATTCCCTCCCTTCTTCCTTTTTATCTCTTTTGTCCCTCCTGCTTTCTCGCGTTTCTCTTCCGGCCACCGCACGCTGCCGCTTCGATCCACCTTCCTTCGACGCCGCCCT
CGTCAAAATCACTTTACTGGAGAAGCCTCGCGGTGATTTTGCGCGGCTATCCAGTCCATGAAAGGAAAGGAAAGGAAAGTAAGATTTCTTTTGTTGGGAAAATTGCCGAT
GAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGTTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGAAATTTGACCAGCTTGC
TTTGAGGGCTCATCTGGGTCAGAACACGGTTCCTCTTAGAGGTCCTAAGAACTACCAAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTATCACACAGCCATTCCA
AGCCATATGTGAGGTCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATGGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTGAATATGAGTTTCAAAAAAACCCATTTGTTAGTGTTGGGCTTGAAGAACCCGGAAACCCAATGGGTATTTTCTCTTGAAAGTGCACCTGATCGGCTGACCCT
TATTCCCTCCCTTCTTCCTTTTTATCTCTTTTGTCCCTCCTGCTTTCTCGCGTTTCTCTTCCGGCCACCGCACGCTGCCGCTTCGATCCACCTTCCTTCGACGCCGCCCT
CGTCAAAATCACTTTACTGGAGAAGCCTCGCGGTGATTTTGCGCGGCTATCCAGTCCATGAAAGGAAAGGAAAGGAAAGTAAGATTTCTTTTGTTGGGAAAATTGCCGAT
GAAATTCGCATCTGTGAAGTTCCAGCATTGAAAGCTCTGAGGTTTACTCAGACAGCAAGGTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGAAATTTGACCAGCTTGC
TTTGAGGGCTCATCTGGGTCAGAACACGGTTCCTCTTAGAGGTCCTAAGAACTACCAAGAGGCAGTGAAGCATTTCGGTCCAGCACCTGGTGTATCACACAGCCATTCCA
AGCCATATGTGAGGTCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGATATGGGGTTTGA
Protein sequenceShow/hide protein sequence
MWLNMSFKKTHLLVLGLKNPETQWVFSLESAPDRLTLIPSLLPFYLFCPSCFLAFLFRPPHAAASIHLPSTPPSSKSLYWRSLAVILRGYPVHERKGKESKISFVGKIAD
EIRICEVPALKALRFTQTARSRIEKAGWECLKFDQLALRAHLGQNTVPLRGPKNYQEAVKHFGPAPGVSHSHSKPYVRSKGRKFERARGKRNSRGYGV