CuGenDBv2

Gene ID	PI0014979
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	chr01:23590393..23590881
RNA-Seq Expression	PI0014979
Synteny	PI0014979
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0048038 - quinone binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

TYK19320.1 NADH dehydrogenase subunit 7 [Cucumis melo var. makuwa]

9.9e-71

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

YP_004841841.1 NADH-plastoquinone oxidoreductase subunit 7 [Cucumis melo subsp. melo]

9.9e-71

84.91

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

YP_009317442.1 NADH dehydrogenase subunit 7 [Coccinia grandis]

1.4e-69

83.02

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRK+D YECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDR RSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

YP_009326046.1 NADH dehydrogenase subunit 7 [Citrullus lanatus]

1.1e-69

83.65

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVD YECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDR RSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

YP_009420851.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis]

1.1e-69

83.65

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVD YECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDR RSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU61 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.8e-71

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

A0A1X9Q1R4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.8e-71

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

A0A218KGA7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.8e-71

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

A0A249RZD9 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.8e-71

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

G3ETV5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.8e-71

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

SwissProt top hits

e value

%identity

Alignment

A0ZZ91 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.1e-67

76.73

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGI  DLRKVD YECYDEFDWE+QWQKEGDSLARYLVR++EMTES+KIIQQALEGIPGGPYENLEIR FDR R PEWNDF+YRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LY R+EAPKGELGIFLIGDQ GFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

A4QLG5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

3.7e-68

77.36

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYE YDEF+WE+QWQK+GDSLARYLVRL+EMTES+KIIQQALEG+PGGPYENLE RSFDR R+PEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQ GFPWRWKIR PGFINLQILP+LVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

9.6e-69

78.62

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGI  DLRKVD YECYDEFDWEVQWQKEGDSLARYLVR++EMTES+KIIQQALEGIPGGPYENLEIR FDR + PEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQ GFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.7e-69

79.25

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGI  DLRKVD YECYDEFDWEVQWQKEGDSLARYLVR+ EMTES+KIIQQALEGIPGGPYENLEIR FDR R+PEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQ GFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.3e-73

84.91

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQGGFPWRWKIR PGFINLQILPQLVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

2.9e-68

75.47

Show/hide

Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------
        MLRASGIP DLRK+DRYE YDEF+WE+QWQK+GDSLARYLVRL+EMTES+KIIQQALEG+PGGPYENLE R FDR R+PEWNDF+YRFI           
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFI-----------

Query:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL
          +LYVRVEAPKGELGIFLIGDQ GFPWRWKIR PGFINLQILP+LVKRM ++ ++  L
Subjt:  --KLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNEL

ATMG00510.1 NADH dehydrogenase subunit 7

1.7e-15

32.48

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Query:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPE-------------------W
        MLR  G+  D R+   Y+ +D+ D +V     GD   RY +R+ EM +S++II Q L  +P G      I++ DR   P                     
Subjt:  MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPE-------------------W

Query:  NDFDYRFIKLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMM
          F       Y  VEAPKGE G+FL+ +    P+R KIR PG  + Q L  + K  M
Subjt:  NDFDYRFIKLYVRVEAPKGELGIFLIGDQGGFPWRWKIRLPGFINLQILPQLVKRMM

Sequences

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CDS sequence

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ATGCTGCGAGCTTCCGGAATACCTTTGGATCTTCGTAAAGTTGATCGTTATGAGTGTTATGACGAATTTGATTGGGAAGTTCAGTGGCAAAAAGAAGGCGATTCATTAGC
TCGTTATTTAGTCAGACTTGCTGAGATGACGGAATCTGTAAAAATTATTCAACAAGCTTTGGAAGGAATTCCTGGGGGACCTTATGAAAATTTAGAAATACGATCTTTTG
ATCGAGCAAGGTCTCCGGAATGGAATGACTTTGACTATCGATTCATTAAACTTTATGTGAGAGTCGAAGCCCCCAAAGGAGAATTAGGCATTTTTTTGATCGGGGATCAG
GGTGGTTTTCCTTGGAGATGGAAAATTCGCCTGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAGTTAAAAGAATGATGATAAGTAAATTGTTGAATGAATTAGA
AAACAATTAA

mRNA sequence

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Protein sequence

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MLRASGIPLDLRKVDRYECYDEFDWEVQWQKEGDSLARYLVRLAEMTESVKIIQQALEGIPGGPYENLEIRSFDRARSPEWNDFDYRFIKLYVRVEAPKGELGIFLIGDQ
GGFPWRWKIRLPGFINLQILPQLVKRMMISKLLNELENN

PI0014979 (gene) of Melon (PI 482460) v1 genome