; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014982 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014982
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr03:12161118..12161429
RNA-Seq ExpressionPI0014982
SyntenyPI0014982
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031947.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.2e-3884.31Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNN T  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.1e-3985.29Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNNAT  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.1e-3985.29Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNNAT  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]4.1e-3985.29Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNNAT  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.2e-3884.31Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNN T  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
TrEMBL top hitse value%identityAlignment
A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.7e-3984.31Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNN T  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.0e-3985.29Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNNAT  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.0e-3985.29Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNNAT  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.0e-3985.29Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNNAT  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like5.7e-3984.31Show/hide
Query:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK
        ME+SSGQHSETSPS SP P  + STNN T  VSSSKPPLP+KK+ RATKKTTST+WDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLK+QCKK
Subjt:  MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKK

Query:  VP
         P
Subjt:  VP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAGTAGTGGACAACATAGTGAAACTAGCCCTAGCCCTAGTCCTGGTCCTAGTTCTTCTTCTTCCACTAATAACGCAACTAGAATTGTGAGTTCGAGTAAACC
ACCACTGCCCAATAAGAAGAGAGCTAGAGCCACTAAGAAGACAACTTCCACTATATGGGATCACTTCACAAAGTTGGAAGAGAATAGTTCTAGGTGCACATGCAATTATT
GTGATAAAGAGTATTGTTGTGATACTACCTCATGTGGAACTAGCACATTATGGAAGCACTTAAAAAGTCAGTGTAAGAAAGTACCCATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAGTAGTGGACAACATAGTGAAACTAGCCCTAGCCCTAGTCCTGGTCCTAGTTCTTCTTCTTCCACTAATAACGCAACTAGAATTGTGAGTTCGAGTAAACC
ACCACTGCCCAATAAGAAGAGAGCTAGAGCCACTAAGAAGACAACTTCCACTATATGGGATCACTTCACAAAGTTGGAAGAGAATAGTTCTAGGTGCACATGCAATTATT
GTGATAAAGAGTATTGTTGTGATACTACCTCATGTGGAACTAGCACATTATGGAAGCACTTAAAAAGTCAGTGTAAGAAAGTACCCATATAA
Protein sequenceShow/hide protein sequence
MESSSGQHSETSPSPSPGPSSSSSTNNATRIVSSSKPPLPNKKRARATKKTTSTIWDHFTKLEENSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKSQCKKVPI