; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0014987 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014987
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:10749579..10750315
RNA-Seq ExpressionPI0014987
SyntenyPI0014987
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025967.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-4254.4Show/hide
Query:  MGASIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN
        +G SIQQFD DV++                    +  LRSNN R RDV DD Q V DICNNNERY++EI+ MYD+PIVPPPVHR                
Subjt:  MGASIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN

Query:  TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
         +SQ GYGSPM MMP   A YCDSEVDTGYYD+          VGPS+SYMH HGRG GEHN+YLY+E PA VSD QEY+QE ENQE+  Q R
Subjt:  TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.0e-4455.84Show/hide
Query:  MGASIQQFDRDVSR--IH-------------PLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHNT----
        +G  IQQFD DV++  IH               RSNN R RDVADD Q V DICNNN+R++EEIH MY +PIVPP +HR  V+ E+ EL+EVYHN     
Subjt:  MGASIQQFDRDVSR--IH-------------PLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHNT----

Query:  -----QSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
             Q+Q GYGSPM MMP F   YCD EV+T YYDS VGPSS         SYMH H    GEHNEYLY+E P  VSD QEYQQE ENQEE  Q R
Subjt:  -----QSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.5e-5060.41Show/hide
Query:  SIQQFDRDVSR--IHPL----------------RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN-----
        SIQQFD+DV++  IH                  RSNN R RDVADDLQ   DICNNNERY+EEIH MYD+PIVPPPVHR  VR E+ EL++VYHN     
Subjt:  SIQQFDRDVSR--IHPL----------------RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN-----

Query:  ----TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
            TQSQ GYGSPM MMP F A YCD EV  GYYD+ VGPSS         SYMH H RG GEHNEYLY+E PA+VSD QEYQQE ENQE+  Q R
Subjt:  ----TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.3e-4866.46Show/hide
Query:  RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---------TQSQIGYGSPM-MMPAFRARYCDSEVDTG
        RSNN R RDVADDLQ   DICNNNERY+EEIH MYD+PIVPPPVHR  VR E+ EL++VYHN         TQSQ GYGSPM MMP F A YCD EV  G
Subjt:  RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---------TQSQIGYGSPM-MMPAFRARYCDSEVDTG

Query:  YYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
        YYD+ VGPSS         SYMH H RG GEHNEYLY+E PA+VSD QEYQQE ENQE+  Q R
Subjt:  YYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-4856.78Show/hide
Query:  SIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---
        SIQQFD DV++                    +  LRSNN R RDV +D Q V DICNNNERY+E+IH +YD+PIVPPPVHRE  R E+ EL+EVYHN   
Subjt:  SIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---

Query:  ------TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
              TQSQ GYGSPM MMP F A YCDSEV  GYYD+          VGPS+SYM+ HGRG GEHNEYLY+E P +VSD QEYQQE +NQE+  Q R
Subjt:  ------TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.8e-4555.84Show/hide
Query:  MGASIQQFDRDVSR--IH-------------PLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHNT----
        +G  IQQFD DV++  IH               RSNN R RDVADD Q V DICNNN+R++EEIH MY +PIVPP +HR  V+ E+ EL+EVYHN     
Subjt:  MGASIQQFDRDVSR--IH-------------PLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHNT----

Query:  -----QSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
             Q+Q GYGSPM MMP F   YCD EV+T YYDS VGPSS         SYMH H    GEHNEYLY+E P  VSD QEYQQE ENQEE  Q R
Subjt:  -----QSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

A0A5A7SMM2 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.2e-4354.4Show/hide
Query:  MGASIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN
        +G SIQQFD DV++                    +  LRSNN R RDV DD Q V DICNNNERY++EI+ MYD+PIVPPPVHR                
Subjt:  MGASIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN

Query:  TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
         +SQ GYGSPM MMP   A YCDSEVDTGYYD+          VGPS+SYMH HGRG GEHN+YLY+E PA VSD QEY+QE ENQE+  Q R
Subjt:  TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-5060.41Show/hide
Query:  SIQQFDRDVSR--IHPL----------------RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN-----
        SIQQFD+DV++  IH                  RSNN R RDVADDLQ   DICNNNERY+EEIH MYD+PIVPPPVHR  VR E+ EL++VYHN     
Subjt:  SIQQFDRDVSR--IHPL----------------RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN-----

Query:  ----TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
            TQSQ GYGSPM MMP F A YCD EV  GYYD+ VGPSS         SYMH H RG GEHNEYLY+E PA+VSD QEYQQE ENQE+  Q R
Subjt:  ----TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.1e-4866.46Show/hide
Query:  RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---------TQSQIGYGSPM-MMPAFRARYCDSEVDTG
        RSNN R RDVADDLQ   DICNNNERY+EEIH MYD+PIVPPPVHR  VR E+ EL++VYHN         TQSQ GYGSPM MMP F A YCD EV  G
Subjt:  RSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---------TQSQIGYGSPM-MMPAFRARYCDSEVDTG

Query:  YYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
        YYD+ VGPSS         SYMH H RG GEHNEYLY+E PA+VSD QEYQQE ENQE+  Q R
Subjt:  YYDSRVGPSS---------SYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-4856.78Show/hide
Query:  SIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---
        SIQQFD DV++                    +  LRSNN R RDV +D Q V DICNNNERY+E+IH +YD+PIVPPPVHRE  R E+ EL+EVYHN   
Subjt:  SIQQFDRDVSR--------------------IHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHN---

Query:  ------TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR
              TQSQ GYGSPM MMP F A YCDSEV  GYYD+          VGPS+SYM+ HGRG GEHNEYLY+E P +VSD QEYQQE +NQE+  Q R
Subjt:  ------TQSQIGYGSPM-MMPAFRARYCDSEVDTGYYDS---------RVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTCGATTCAGCAATTTGATCGAGACGTGTCAAGAATACATCCATTGAGATCGAACAATATAAGATTTCGTGATGTTGCAGATGATCTACAACATGTCTTTGA
TATATGTAATAATAACGAGAGGTACATAGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCATAGGGAACATGTTCGAACGGAAAAAACTGAAC
TCGAAGAAGTTTACCATAATACACAAAGTCAAATTGGTTATGGTAGTCCGATGATGATGCCAGCATTTAGAGCAAGATATTGTGATTCTGAGGTCGATACAGGATATTAT
GACTCAAGGGTCGGTCCATCGTCTTCTTACATGCATGTACACGGGCGCGGCTGCGGAGAACATAACGAATATTTGTACTATGAAACACCTGCAAATGTATCAGATCCACA
AGAGTACCAACAAGAACTAGAGAATCAAGAGGAGCCAGGACAGCTTAGATTCAGAGTCGACGACGACAACCAGCTCGAAATCGACGACATCCGGGGTGTGGAACTCGTTG
ATTTTCTTTTATCTTTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTTCGATTCAGCAATTTGATCGAGACGTGTCAAGAATACATCCATTGAGATCGAACAATATAAGATTTCGTGATGTTGCAGATGATCTACAACATGTCTTTGA
TATATGTAATAATAACGAGAGGTACATAGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTCATAGGGAACATGTTCGAACGGAAAAAACTGAAC
TCGAAGAAGTTTACCATAATACACAAAGTCAAATTGGTTATGGTAGTCCGATGATGATGCCAGCATTTAGAGCAAGATATTGTGATTCTGAGGTCGATACAGGATATTAT
GACTCAAGGGTCGGTCCATCGTCTTCTTACATGCATGTACACGGGCGCGGCTGCGGAGAACATAACGAATATTTGTACTATGAAACACCTGCAAATGTATCAGATCCACA
AGAGTACCAACAAGAACTAGAGAATCAAGAGGAGCCAGGACAGCTTAGATTCAGAGTCGACGACGACAACCAGCTCGAAATCGACGACATCCGGGGTGTGGAACTCGTTG
ATTTTCTTTTATCTTTTAAATAA
Protein sequenceShow/hide protein sequence
MGASIQQFDRDVSRIHPLRSNNIRFRDVADDLQHVFDICNNNERYIEEIHYMYDVPIVPPPVHREHVRTEKTELEEVYHNTQSQIGYGSPMMMPAFRARYCDSEVDTGYY
DSRVGPSSSYMHVHGRGCGEHNEYLYYETPANVSDPQEYQQELENQEEPGQLRFRVDDDNQLEIDDIRGVELVDFLLSFK