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PI0014991 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0014991
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr10:7678353..7679075
RNA-Seq ExpressionPI0014991
SyntenyPI0014991
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]6.5e-7966.53Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQKGRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-7866.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-7866.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]6.5e-7966.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++  +GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-7866.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDGA-----------------------KTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDGA-----------------------KTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

TrEMBL top hitse value%identityAlignment
A0A5A7SUK4 Reverse transcriptase3.2e-7966.53Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQKGRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

A0A5D3BRZ6 Reverse transcriptase9.2e-7966.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

A0A5D3BYE6 Reverse transcriptase3.2e-7966.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++  +GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

A0A5D3C4R1 Reverse transcriptase9.2e-7966.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

A0A5D3DQ20 Retrotrans_gag domain-containing protein9.2e-7966.12Show/hide
Query:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV
        MS++   GK+  DRLVE+EEQMLYLVEVPD+ R+L+ R++EISEK + ID                            RT NYERGDSSTGSV+HIEE V
Subjt:  MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDG-----------------------AKTARTGNYERGDSSTGSVSHIEEHV

Query:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK
         EL SSQK ++EMINGM EDFRA  DVVRNEIADV+ R++LTM+AMANQAP GG I V+RVKI E KPFC ARDAKALENYIFDL+QYFRA NTVTEE K
Subjt:  GELGSSQKMIVEMINGMLEDFRAAFDVVRNEIADVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVK

Query:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS
        VTLATMHL EDAKLWWR R+V+IQ+GRC IDTWD+LK++LRS
Subjt:  VTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCGACGAAACAGATAGGCAAGTCCCACGTAGATCGATTGGTAGAGATTGAAGAGCAGATGCTCTACCTAGTGGAAGTTCCTGACGCCGACCGCTTTTTGAAAAT
ACGTATTCAAGAGATTTCTGAGAAAGCCGATGCTATTGATGGGGCAAAAACTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAACAGGCTCTGTTTCCCATATAG
AAGAGCATGTTGGCGAGTTAGGTAGCTCCCAAAAAATGATCGTAGAGATGATAAATGGCATGTTAGAGGATTTTCGTGCTGCTTTCGATGTCGTCAGAAATGAGATCGCA
GATGTGAGCACGAGGGTGAACCTCACGATGCAAGCCATGGCAAACCAAGCTCCAGTTGGAGGAGTGATCCAAGTTAACAGAGTGAAAATTCTCGAACTTAAGCCCTTCTG
CAGGGCAAGGGATGCAAAAGCCTTAGAGAACTACATCTTTGATCTCAAACAATACTTTCGGGCCATGAACACAGTCACAGAAGAAGTGAAAGTGACGCTAGCAACTATGC
ATCTAGTTGAGGATGCAAAGTTATGGTGGAGGTTCCGATATGTTGAGATCCAAAAAGGGCGTTGCATGATAGATACTTGGGACAGTTTGAAGCAAAAACTTCGCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCGACGAAACAGATAGGCAAGTCCCACGTAGATCGATTGGTAGAGATTGAAGAGCAGATGCTCTACCTAGTGGAAGTTCCTGACGCCGACCGCTTTTTGAAAAT
ACGTATTCAAGAGATTTCTGAGAAAGCCGATGCTATTGATGGGGCAAAAACTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAACAGGCTCTGTTTCCCATATAG
AAGAGCATGTTGGCGAGTTAGGTAGCTCCCAAAAAATGATCGTAGAGATGATAAATGGCATGTTAGAGGATTTTCGTGCTGCTTTCGATGTCGTCAGAAATGAGATCGCA
GATGTGAGCACGAGGGTGAACCTCACGATGCAAGCCATGGCAAACCAAGCTCCAGTTGGAGGAGTGATCCAAGTTAACAGAGTGAAAATTCTCGAACTTAAGCCCTTCTG
CAGGGCAAGGGATGCAAAAGCCTTAGAGAACTACATCTTTGATCTCAAACAATACTTTCGGGCCATGAACACAGTCACAGAAGAAGTGAAAGTGACGCTAGCAACTATGC
ATCTAGTTGAGGATGCAAAGTTATGGTGGAGGTTCCGATATGTTGAGATCCAAAAAGGGCGTTGCATGATAGATACTTGGGACAGTTTGAAGCAAAAACTTCGCTCGTAG
Protein sequenceShow/hide protein sequence
MSATKQIGKSHVDRLVEIEEQMLYLVEVPDADRFLKIRIQEISEKADAIDGAKTARTGNYERGDSSTGSVSHIEEHVGELGSSQKMIVEMINGMLEDFRAAFDVVRNEIA
DVSTRVNLTMQAMANQAPVGGVIQVNRVKILELKPFCRARDAKALENYIFDLKQYFRAMNTVTEEVKVTLATMHLVEDAKLWWRFRYVEIQKGRCMIDTWDSLKQKLRS