CuGenDBv2

Gene ID	PI0015051
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Mediator of RNA polymerase II transcription subunit 4
Genome location	chr08:16523432..16525854
RNA-Seq Expression	PI0015051
Synteny	PI0015051
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019258 - Mediator complex, subunit Med4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142109.1 mediator of RNA polymerase II transcription subunit 4 [Cucumis sativus]

1.5e-209

97.05

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KTEG A
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPV  DANPL 
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
          AAIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

XP_008449288.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis melo]

6.8e-215

98.28

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPV  DANPLS
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
        NMAAIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

XP_022143910.1 mediator of RNA polymerase II transcription subunit 4 [Momordica charantia]

5.2e-207

94.12

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQI QSPARLGL NPNSPSIQNPTPPKLPPSQQSHHQNQ NLSSPTPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
         SQTQSSPST LD+TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY+RP+RVKT+   
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        EN+SLCSTTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPKAVESTEKTIEPMIEPPAPVPTDANPL+
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD
        N+AAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEP QLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSD
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD

Query:  EGSSEDDD
        EGSSEDDD
Subjt:  EGSSEDDD

XP_023518528.1 mediator of RNA polymerase II transcription subunit 4 [Cucurbita pepo subsp. pepo]

1.6e-200

92.16

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEV PNR+LWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
         SQTQS+PST LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANKLKDAEQVLDVLFDDYADYQ  +RVKT    
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLC-STTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPL
        ENESLC STTVASQL+LSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY+FA+LDVGLPK+VESTEKTIEPMIEPPAPVPTDANPL
Subjt:  ENESLC-STTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPL

Query:  SNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD
        + +A IQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEPQLR NALPGLH+P EPIQVRHVQLDILDQDDDSSDY S+
Subjt:  SNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD

Query:  EGSSEDDD
        EGSSEDDD
Subjt:  EGSSEDDD

XP_038882754.1 mediator of RNA polymerase II transcription subunit 4 [Benincasa hispida]

4.4e-214

97.05

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGL NPNSPSIQNPTPPKLPPSQQSHHQNQ N+SSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
        TSQTQSSPSTSLDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVK +  A
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        ENESLCSTTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD+GLPKAVESTEKTIEPMIEPPAPVPTDANPLS
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
        NMA+IQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNA PGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXB7 Mediator of RNA polymerase II transcription subunit 4

7.1e-210

97.05

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KTEG A
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPV  DANPL 
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
          AAIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

A0A1S3BLP6 Mediator of RNA polymerase II transcription subunit 4

3.3e-215

98.28

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPV  DANPLS
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
        NMAAIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

A0A5A7TZC1 Mediator of RNA polymerase II transcription subunit 4

3.3e-215

98.28

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPV  DANPLS
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
        NMAAIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

A0A6J1CQ51 Mediator of RNA polymerase II transcription subunit 4

2.5e-207

94.12

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQI QSPARLGL NPNSPSIQNPTPPKLPPSQQSHHQNQ NLSSPTPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
         SQTQSSPST LD+TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY+RP+RVKT+   
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS
        EN+SLCSTTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPKAVESTEKTIEPMIEPPAPVPTDANPL+
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLS

Query:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD
        N+AAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEP QLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSD
Subjt:  NMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEP-QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD

Query:  EGSSEDDD
        EGSSEDDD
Subjt:  EGSSEDDD

A0A6J1HH73 Mediator of RNA polymerase II transcription subunit 4

3.3e-199

91.67

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQN SNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEV PNR+LWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA
         SQTQS+PST LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANKLKDAEQVLDVLFDDYADYQ  +RVKT    
Subjt:  TSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGA

Query:  ENESLCS-TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPL
        ENESLCS TTVASQL+LSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY FA+LDVGLPK+VESTEKTIEPMIE PAPVPTDANPL
Subjt:  ENESLCS-TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPL

Query:  SNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD
        + +A IQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPP+DSLPV RVDEPQLR NALPGLH+P EPIQVRHVQLDILDQDDDSSDY S+
Subjt:  SNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD

Query:  EGSSEDDD
        EGSSEDDD
Subjt:  EGSSEDDD

SwissProt top hits

e value

%identity

Alignment

Q54D00 Putative mediator of RNA polymerase II transcription subunit 4

3.5e-04

29.03

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Query:  SLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENESL-----
        S ++TP+   ++++    +       + +L++   +Q    +I  EI  KD  +   A  LKD E  L+       D           G  NE L     
Subjt:  SLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENESL-----

Query:  ------CSTTVASQLRLSDILSYAHRISYTTFAPPEFG-AGQAPLRGAL-PPAPQDEQMRASQL-----------YNFANLDVGLP
                  V  ++   D++SYAH+IS TT AP  FG    APL     PPAPQDE MR+S L           Y  A +DV  P
Subjt:  ------CSTTVASQLRLSDILSYAHRISYTTFAPPEFG-AGQAPLRGAL-PPAPQDEQMRASQL-----------YNFANLDVGLP

Q9LZ00 Mediator of RNA polymerase II transcription subunit 4

1.6e-137

64.98

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSPTPSSTLLPLLPPLPRAQALLLQMASLASKL
        MLQHQIVQSPARLGLT P SPS+QNPTP     P    S QS H   Q Q NL              S+   SS LL LLPPLPRAQALL QMA L SKL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSPTPSSTLLPLLPPLPRAQALLLQMASLASKL

Query:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVL
        F+VSPNR++WL+AFRGSLP+FL+S +   P    + +PSS+KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANKLKDAE+VL
Subjt:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVL

Query:  DVLFDDYADYQRPRRVKTEGGAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA
        D+L DDY+DY++P+R K E   E+     S  STTV+SQL+L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA+LD+GLPK 
Subjt:  DVLFDDYADYQRPRRVKTEGGAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA

Query:  VESTEKTIEPMIEPPAPVPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALPGLHKP
        VE+ EK +E +IEPP P         +++AI  LLPPNI VPSGWKPGMPVELPRDLP+PPPGWKPGDPV LPP++S+   R ++ Q +RP+   GLH+P
Subjt:  VESTEKTIEPMIEPPAPVPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALPGLHKP

Query:  PEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        P+ IQVR VQLDIL +DDDSSDY+SD+ SS+D+D
Subjt:  PEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

Arabidopsis top hits

e value

%identity

Alignment

AT5G02850.1 hydroxyproline-rich glycoprotein family protein

1.1e-138

64.98

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSPTPSSTLLPLLPPLPRAQALLLQMASLASKL
        MLQHQIVQSPARLGLT P SPS+QNPTP     P    S QS H   Q Q NL              S+   SS LL LLPPLPRAQALL QMA L SKL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSPTPSSTLLPLLPPLPRAQALLLQMASLASKL

Query:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVL
        F+VSPNR++WL+AFRGSLP+FL+S +   P    + +PSS+KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANKLKDAE+VL
Subjt:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTSLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVL

Query:  DVLFDDYADYQRPRRVKTEGGAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA
        D+L DDY+DY++P+R K E   E+     S  STTV+SQL+L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA+LD+GLPK 
Subjt:  DVLFDDYADYQRPRRVKTEGGAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA

Query:  VESTEKTIEPMIEPPAPVPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALPGLHKP
        VE+ EK +E +IEPP P         +++AI  LLPPNI VPSGWKPGMPVELPRDLP+PPPGWKPGDPV LPP++S+   R ++ Q +RP+   GLH+P
Subjt:  VESTEKTIEPMIEPPAPVPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQ-LRPNALPGLHKP

Query:  PEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        P+ IQVR VQLDIL +DDDSSDY+SD+ SS+D+D
Subjt:  PEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTACAGCATCAAATTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCCCTCTATTCAAAACCCTACTCCTCCTAAATTGCCCCCTTCTCAACAATC
CCATCACCAAAATCAATCTAATCTCTCTTCTCCCACCCCTTCCTCCACCCTCCTTCCTCTACTTCCTCCTCTTCCTAGAGCTCAAGCTCTTCTCCTTCAAATGGCTTCAT
TAGCTTCCAAGCTCTTTGAAGTCTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGGTCTCTTCCTACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACC
TCTCTTGATTCTACTCCATCTTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTTCTGCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCA
AGACTCTAAGCAGAAGATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTTAAGGATGCTGAGCAGGTACTTGATGTTTTGTTTGATG
ATTATGCGGATTATCAGCGTCCTCGACGGGTTAAAACGGAGGGTGGTGCTGAAAATGAGTCTTTGTGTTCGACTACAGTTGCATCCCAGTTGAGATTATCTGATATATTG
TCCTATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCG
TGCGTCTCAATTGTATAATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCACGGAGAAAACTATTGAGCCAATGATTGAGCCCCCAGCTCCGGTGCCAA
CAGATGCTAATCCTCTTTCTAATATGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTCCCTTCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTAGAGAT
TTACCAATGCCCCCACCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCACCGATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCT
TCCAGGATTGCATAAACCTCCTGAGCCAATTCAAGTTAGGCACGTTCAATTGGATATTCTTGATCAAGATGATGATAGTAGTGATTACACTAGTGATGAAGGAAGCTCTG
AAGATGATGATTGA

mRNA sequence

Show/hide mRNA sequence

CTCTGAGATGAGAGAGGAAGAATAACGCGCGGCTGTGAGAGGTAGACGCCGAATCTGCGAGAGAATTTGTGGGTCTCCATTTAGCGGCAGTGCGCCGGTAACTGTTTTTC
TTTGAGATTTTTCAGTGTGTATTTGATTGAAGCTTGAATATGTCAAGGATTGAGGTTTAATCGATTTCTTCGTGAGAAGGTTTTCATAGCTTTGAAGGTTTATAATTGAT
TGGGGTTTTTGATTCCATTATAACTCTGTCTGATTACACTAGATCTCTTGGTGTTCTTATTCTCTAGATTGAATTCTGTTTTGGGCATTTTAGAGTTTAGTTGTTTACTC
TCTATTTGTGTATGAACCCTAGTACAATTCATTGAAGCACACAAAAATATGCTACAGCATCAAATTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCC
CTCTATTCAAAACCCTACTCCTCCTAAATTGCCCCCTTCTCAACAATCCCATCACCAAAATCAATCTAATCTCTCTTCTCCCACCCCTTCCTCCACCCTCCTTCCTCTAC
TTCCTCCTCTTCCTAGAGCTCAAGCTCTTCTCCTTCAAATGGCTTCATTAGCTTCCAAGCTCTTTGAAGTCTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGG
TCTCTTCCTACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACCTCTCTTGATTCTACTCCATCTTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTTCTGCAGAC
CCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAGAAGATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTG
CTAATAAGCTTAAGGATGCTGAGCAGGTACTTGATGTTTTGTTTGATGATTATGCGGATTATCAGCGTCCTCGACGGGTTAAAACGGAGGGTGGTGCTGAAAATGAGTCT
TTGTGTTCGACTACAGTTGCATCCCAGTTGAGATTATCTGATATATTGTCCTATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGC
TCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCGTGCGTCTCAATTGTATAATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCA
CGGAGAAAACTATTGAGCCAATGATTGAGCCCCCAGCTCCGGTGCCAACAGATGCTAATCCTCTTTCTAATATGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACT
GTCCCTTCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTAGAGATTTACCAATGCCCCCACCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCACCGATGGACTC
TCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCTTCCAGGATTGCATAAACCTCCTGAGCCAATTCAAGTTAGGCACGTTCAATTGGATATTCTTG
ATCAAGATGATGATAGTAGTGATTACACTAGTGATGAAGGAAGCTCTGAAGATGATGATTGAGTGGAACTTGGCCTGAATCGTCAATTAATGTCATAAATGTCCCCTTGT
TTACAAAAGAGATATGGGTGTAGAGACAATCAAAAGGTTTGCCTAGAAGCAGCAACCCATAAAGAAAGTATAATATAGTTTACCGAGGACTATATATGCATGAGGCTAAG
CAGCACTCTGCAGGGGGAAGGTTACATTTCATACTTTCAAACTTGCATGTTATTGATAATGTGTTCTGCATTCCCAAGGTCGACTTGAAACACACAAATCTTTTCAACTT
TTTAATTTGAAAAGCTATAACTCTCCTGACTTGAGTAAAAACTCTCCTGACTTGGGTTCTTTTACTCATGTTTTCTTGGTTTTTGAATTTTGAATATGAGATTTAATCAA
ACTCTCTTAGGGTACCGGATGCGTTCTAAACCATAGTAAACATTACTATCTTTTATACCATGTCGTAGAGTGCAGTATATAAGCTTCTAGGAGTTGAATCAATTATTGAT
TAAGTATGATCATTTGAAGGAAACAGATTAGCTTATTTTATGTTGGTGGCATTCAGAGTTGAATATCAGATTCTGTATGTTACGGCTTGTACTTGTGAAAGAAAAAAATT
CTGAAATGAAGATTGTTGTTGTTGAAGCCTTTTCTCCTGTGTTGAAGAATATGAAGATTTAGGATGTTTTTTTCTTTAAAAAAAGATATTGTTATTTTCTATTACATCCT
TGGGTATTTTAGAAGAAGCTTCAGATTCTGAAGTTTTGAAGCAGCTGTAAGGTGGGCATTTGTGAATCCTAAACTATTATGAGCTTCATTTATCAAATGTGAGAAATTAT
TAT

Protein sequence

Show/hide protein sequence

MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSPTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPST
SLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDIL
SYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVPTDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPRD
LPMPPPGWKPGDPVPLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

PI0015051 (gene) of Melon (PI 482460) v1 genome