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PI0015053 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015053
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr05:5121986..5122756
RNA-Seq ExpressionPI0015053
SyntenyPI0015053
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047105.1 uncharacterized protein E6C27_scaffold466G00790 [Cucumis melo var. makuwa]1.0e-0634.56Show/hide
Query:  TTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQ-------------PTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKRIST
        T++  S  QDH+PLA LL++     V    P +PS+S  +Q              T E +   + +P VP P  A +P   + S P + KT+     I+ 
Subjt:  TTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQ-------------PTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKRIST

Query:  KSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        K+ R+K+P ++  +PIDG+SFHH+  +  WK+VVQR
Subjt:  KSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

KAA0060865.1 uncharacterized protein E6C27_scaffold7015G00020 [Cucumis melo var. makuwa]1.1e-0552.63Show/hide
Query:  SPSPPTQPKTKAKNKR--ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        SP  P  PK K +  R  ++TK+GR+K+P +V  VPIDG+SFHHE  V  WK+V+QR
Subjt:  SPSPPTQPKTKAKNKR--ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

KAA0064034.1 uncharacterized protein E6C27_scaffold99G00320 [Cucumis melo var. makuwa]1.1e-0533.08Show/hide
Query:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKR
        +PVS A   H+   A+ +   S  QD++PL  LL++      +E  P++PS S  +Q   ES+ T              +P  + P P   P   +   R
Subjt:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKR

Query:  ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMW
        + +  GR+K+P++V  VPIDG+SFHHE  V  W
Subjt:  ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMW

TYK25797.1 uncharacterized protein E5676_scaffold2413G00010 [Cucumis melo var. makuwa]1.1e-0552.63Show/hide
Query:  SPSPPTQPKTKAKNKR--ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        SP  P  PK K +  R  ++TK+GR+K+P +V  VPIDG+SFHHE  V  WK+V+QR
Subjt:  SPSPPTQPKTKAKNKR--ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

XP_008454678.1 PREDICTED: uncharacterized protein LOC103495034 [Cucumis melo]1.1e-0533.33Show/hide
Query:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTS--PVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKN
        +PVSS    H    A+ +   S  QD++ L    RR+P+     S   +PS S  P +QP     H    +    +      P S+    P + KT+   
Subjt:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTS--PVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKN

Query:  KRISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        + ++ K+GR+K+P +V  VPID +SFHHE  V  WK+V+QR
Subjt:  KRISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

TrEMBL top hitse value%identityAlignment
A0A1S3BZY6 uncharacterized protein LOC1034950345.4e-0633.33Show/hide
Query:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTS--PVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKN
        +PVSS    H    A+ +   S  QD++ L    RR+P+     S   +PS S  P +QP     H    +    +      P S+    P + KT+   
Subjt:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTS--PVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKN

Query:  KRISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        + ++ K+GR+K+P +V  VPID +SFHHE  V  WK+V+QR
Subjt:  KRISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

A0A5A7V9Y4 Uncharacterized protein5.4e-0633.08Show/hide
Query:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKR
        +PVS A   H+   A+ +   S  QD++PL  LL++      +E  P++PS S  +Q   ES+ T              +P  + P P   P   +   R
Subjt:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKR

Query:  ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMW
        + +  GR+K+P++V  VPIDG+SFHHE  V  W
Subjt:  ISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMW

A0A5D3C1J5 Uncharacterized protein4.9e-0734.56Show/hide
Query:  TTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQ-------------PTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKRIST
        T++  S  QDH+PLA LL++     V    P +PS+S  +Q              T E +   + +P VP P  A +P   + S P + KT+     I+ 
Subjt:  TTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQ-------------PTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKRIST

Query:  KSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        K+ R+K+P ++  +PIDG+SFHH+  +  WK+VVQR
Subjt:  KSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

A0A5D3CB76 Envelope-like protein1.2e-0527.02Show/hide
Query:  VKKISTPKDVGPFVKRLRINKHGVRMRGTTKKASTSVHPSTPVSSNLVVPAPPPSLLDSPVYPVVPDSSLSSSASDTHPRSSHSPSQLSNHLNTLPTHDS
        VKKI+ P D  P +    +N + +  +     +S  V   TP    +    P PSL  SP+ P +PD +  + + D  P +S   +   N  N  P  D+
Subjt:  VKKISTPKDVGPFVKRLRINKHGVRMRGTTKKASTSVHPSTPVSSNLVVPAPPPSLLDSPVYPVVPDSSLSSSASDTHPRSSHSPSQLSNHLNTLPTHDS

Query:  VNQ-SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKA
        V+   PV+      E     +  PS+S +                                                           +PS PT+PKT  
Subjt:  VNQ-SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKA

Query:  K-----NKRISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR
        K      + I+TK+GR+K+PL+++ VPIDG+SFH E +V  WK+VVQR
Subjt:  K-----NKRISTKSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR

A0A5D3D7Z9 Putative mitochondrial protein7.1e-0635.77Show/hide
Query:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPN-----PASVPYSNSPSPPTQPKTK
        +PVS     H    A+ +   S  QD++PL HLL++       E  P NPS S  +Q +  +  T      +P P      P+S     SP  P  PK K
Subjt:  SPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPN-----PASVPYSNSPSPPTQPKTK

Query:  AKNKR--ISTKSGRRKVPLHVNPVPIDGLSFHHEAHV
         +  R  ++TK+ R+K+P +V PV IDG+SFHHE  V
Subjt:  AKNKR--ISTKSGRRKVPLHVNPVPIDGLSFHHEAHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACACTAGACGCAGAACCTATACTCCTAAAGTCCCTGTCAAAAAGATTTCCACACCTAAAGATGTTGGTCCCTTTGTCAAGCGCTTGCGAATTAACAAACATGG
TGTTCGTATGCGTGGTACTACCAAGAAAGCTTCCACCTCTGTGCATCCTTCTACACCCGTTTCATCTAATCTTGTGGTACCTGCTCCTCCTCCCTCTCTTCTTGATTCTC
CTGTTTATCCTGTGGTTCCTGATTCTTCATTGTCTTCCTCTGCCTCTGATACTCATCCTAGAAGTAGTCATTCTCCTTCACAGCTTTCTAATCACTTAAACACGCTTCCT
ACCCATGATTCTGTTAATCAGTCTCCCGTGTCTTCTGCTCATACTCTTCATGAAAATGTGTGTGCTTCCACTACTTCACCTTCATCTTCTTCTCAGGATCACATTCCTCT
GGCCCACTTACTTCGAAGAAATCCCAGTACTACTGTCCTTGAGTCAACACCAACTAACCCTAGTACTTCTCCTGTCACTCAACCTACCTTTGAATCAACTCATACTATTA
ATGGTTCTCCTCCTGTGCCTCAACCCAACCCTGCTTCCGTTCCTTATTCAAATTCTCCTTCTCCTCCTACTCAACCTAAAACTAAGGCAAAAAACAAACGTATTTCTACA
AAGTCTGGTAGAAGAAAGGTGCCCCTGCATGTTAATCCTGTCCCCATTGATGGTCTTTCTTTCCATCATGAGGCTCATGTCCACATGTGGAAATATGTGGTTCAACGATG
A
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACACTAGACGCAGAACCTATACTCCTAAAGTCCCTGTCAAAAAGATTTCCACACCTAAAGATGTTGGTCCCTTTGTCAAGCGCTTGCGAATTAACAAACATGG
TGTTCGTATGCGTGGTACTACCAAGAAAGCTTCCACCTCTGTGCATCCTTCTACACCCGTTTCATCTAATCTTGTGGTACCTGCTCCTCCTCCCTCTCTTCTTGATTCTC
CTGTTTATCCTGTGGTTCCTGATTCTTCATTGTCTTCCTCTGCCTCTGATACTCATCCTAGAAGTAGTCATTCTCCTTCACAGCTTTCTAATCACTTAAACACGCTTCCT
ACCCATGATTCTGTTAATCAGTCTCCCGTGTCTTCTGCTCATACTCTTCATGAAAATGTGTGTGCTTCCACTACTTCACCTTCATCTTCTTCTCAGGATCACATTCCTCT
GGCCCACTTACTTCGAAGAAATCCCAGTACTACTGTCCTTGAGTCAACACCAACTAACCCTAGTACTTCTCCTGTCACTCAACCTACCTTTGAATCAACTCATACTATTA
ATGGTTCTCCTCCTGTGCCTCAACCCAACCCTGCTTCCGTTCCTTATTCAAATTCTCCTTCTCCTCCTACTCAACCTAAAACTAAGGCAAAAAACAAACGTATTTCTACA
AAGTCTGGTAGAAGAAAGGTGCCCCTGCATGTTAATCCTGTCCCCATTGATGGTCTTTCTTTCCATCATGAGGCTCATGTCCACATGTGGAAATATGTGGTTCAACGATG
A
Protein sequenceShow/hide protein sequence
MVNTRRRTYTPKVPVKKISTPKDVGPFVKRLRINKHGVRMRGTTKKASTSVHPSTPVSSNLVVPAPPPSLLDSPVYPVVPDSSLSSSASDTHPRSSHSPSQLSNHLNTLP
THDSVNQSPVSSAHTLHENVCASTTSPSSSSQDHIPLAHLLRRNPSTTVLESTPTNPSTSPVTQPTFESTHTINGSPPVPQPNPASVPYSNSPSPPTQPKTKAKNKRIST
KSGRRKVPLHVNPVPIDGLSFHHEAHVHMWKYVVQR