CuGenDBv2

Gene ID	PI0015065
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Exportin-T
Genome location	chr09:9262608..9264157
RNA-Seq Expression	PI0015065
Synteny	PI0015065
Gene Ontology terms	GO:0071528 - tRNA re-export from nucleus (biological process) GO:0005643 - nuclear pore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0016363 - nuclear matrix (cellular component) GO:0000049 - tRNA binding (molecular function) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	IPR011989 - Armadillo-like helical

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141704.1 exportin-T [Cucumis sativus]

1.3e-21

86.36

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKELV F VLLNQLICKFSTSVHGILEDVFPT  S+IFNIIPRDSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

XP_008462297.1 PREDICTED: exportin-T [Cucumis melo]

6.1e-22

86.36

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKELV F VLLNQLICKFSTSVHGILEDVFPT AS+IFN+IPRDSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

XP_022149034.1 exportin-T [Momordica charantia]

3.9e-21

84.85

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKE+V F VLLNQLICKFSTSVHGILEDVFPT AS+IFNIIP DSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

XP_022953461.1 exportin-T-like [Cucurbita moschata]

1.9e-20

81.82

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ L ESEPKE+V F VLLNQLICKFSTSVHGILEDVFPT AS+IF+IIPRDS+PSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

XP_038898562.1 exportin-T [Benincasa hispida]

4.6e-22

87.88

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKELV F VLLNQLICKFSTSVHGILEDVFPT AS+IFNIIPRDSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6Z9 Exportin-T

6.5e-22

86.36

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKELV F VLLNQLICKFSTSVHGILEDVFPT  S+IFNIIPRDSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

A0A1S3CI57 Exportin-T

2.9e-22

86.36

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKELV F VLLNQLICKFSTSVHGILEDVFPT AS+IFN+IPRDSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

A0A5A7UYX4 Exportin-T

2.9e-22

86.36

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKELV F VLLNQLICKFSTSVHGILEDVFPT AS+IFN+IPRDSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

A0A6J1D5T7 Exportin-T

1.9e-21

84.85

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ LAESEPKE+V F VLLNQLICKFSTSVHGILEDVFPT AS+IFNIIP DSLPSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

A0A6J1GNA6 Exportin-T

9.4e-21

81.82

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP
        FP   KALEQ L ESEPKE+V F VLLNQLICKFSTSVHGILEDVFPT AS+IF+IIPRDS+PSGP
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGP

SwissProt top hits

e value

%identity

Alignment

Q7PC79 Exportin-T

2.9e-19

65.22

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI
        FP   KALEQ LA+SEPKE+V F VLLNQLICKF++++H ILE+V+P  A +IFN+IPRD LPS P A+
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI

Q8H3A7 Exportin-T

8.8e-08

42.19

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Query:  PIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSG
        P    AL Q L ++E K++  F  L+NQ+ICKF +S + +LEDVFP  AS +  I+  D+  +G
Subjt:  PIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSG

Arabidopsis top hits

e value

%identity

Alignment

AT1G72560.1 ARM repeat superfamily protein

2.1e-20

65.22

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI
        FP   KALEQ LA+SEPKE+V F VLLNQLICKF++++H ILE+V+P  A +IFN+IPRD LPS P A+
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI

AT1G72560.2 ARM repeat superfamily protein

2.1e-20

65.22

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI
        FP   KALEQ LA+SEPKE+V F VLLNQLICKF++++H ILE+V+P  A +IFN+IPRD LPS P A+
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI

AT1G72560.3 ARM repeat superfamily protein

2.1e-20

65.22

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Query:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI
        FP   KALEQ LA+SEPKE+V F VLLNQLICKF++++H ILE+V+P  A +IFN+IPRD LPS P A+
Subjt:  FPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAI

Sequences

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CDS sequence

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ATGTTGGTGTGCCTCTACGGACTAAGGTCCTCTCTTTTATACATCGAATGGTGGAAACTTTCCGCACATCTATTTTTCCCTATCTTCCAAAAGGCTTTGGAGCAGTCGCT
TGCAGAAAGTGAGCCGAAGGAGTTGGTTAGTTTCCCTGTGTTACTTAATCAACTAATCTGCAAGTTCAGCACTTCGGTCCATGGGATTTTGGAGGATGTATTTCCAACAA
GTGCTAGTCAGATTTTCAACATTATACCAAGAGATTCTCTTCCTTCAGGACCGAAAGCAATATTGAGGAAATTTGTGAACTACAAGAGCTTCAACGAATAG

mRNA sequence

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Protein sequence

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MLVCLYGLRSSLLYIEWWKLSAHLFFPIFQKALEQSLAESEPKELVSFPVLLNQLICKFSTSVHGILEDVFPTSASQIFNIIPRDSLPSGPKAILRKFVNYKSFNE

PI0015065 (gene) of Melon (PI 482460) v1 genome