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PI0015093 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015093
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein RADIALIS-like 1
Genome locationchr01:6178753..6180416
RNA-Seq ExpressionPI0015093
SyntenyPI0015093
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036170.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa]5.0e-3798.73Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYR+SRGN
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

XP_004151116.1 protein RADIALIS-like 1 [Cucumis sativus]2.5e-3697.47Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MAS+SAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSR N
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

XP_008447025.1 PREDICTED: protein RADIALIS-like 1 [Cucumis melo]1.4e-3697.47Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYR+SRGN
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

XP_022952073.1 protein RADIALIS-like 1 [Cucurbita moschata]6.1e-3593.67Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFEEALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+EDVKHIESGKVPFPYRSSRG+
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

XP_038888369.1 protein RADIALIS-like 1 [Benincasa hispida]3.4e-3084.62Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRG
        MASMS+HGSG WTAKQNKAFE+ALA+YD+DTPDRWLNVAKA+GGKT EEVK HY LL+EDVK IESG+VPFPYRSSRG
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRG

TrEMBL top hitse value%identityAlignment
A0A0A0K344 SANT domain-containing protein1.2e-3697.47Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MAS+SAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSR N
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

A0A1S3BGF6 protein RADIALIS-like 17.0e-3797.47Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYR+SRGN
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

A0A5A7SYM4 Protein RADIALIS-like 12.4e-3798.73Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYR+SRGN
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

A0A6J1GJG0 protein RADIALIS-like 12.9e-3593.67Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFEEALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+EDVKHIESGKVPFPYRSSRG+
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

A0A6J1IA78 protein RADIALIS-like 12.9e-3593.67Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MASMSAHGSGVWTAKQNKAFEEALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+EDVKHIESGKVPFPYRSSRG+
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 11.6e-2569.23Show/hide
Query:  ASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRG
        +SMS+  SG WTAKQNKAFE+ALA YD+DTP+RW NVAK +GGKT EEVKRHY+LL++D+  IE+G VPFP YR+S G
Subjt:  ASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRG

Q1A173 Protein RADIALIS-like 61.0e-2162.5Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN
        MAS S      WT  QNK FE ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED+ +IE+G+VP P Y++   N
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN

Q58FS3 Transcription factor RADIALIS5.9e-2568.83Show/hide
Query:  SAHGSG-VWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN
        S  GSG  W+AK+NKAFE ALA+YDKDTPDRW NVA+A+ G+T EEVK+HY++L+ED+K+IESGKVPFP YR++ GN
Subjt:  SAHGSG-VWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN

Q6NNN0 Protein RADIALIS-like 33.6e-2262.03Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN
        MAS S   S  WT K+NK FE ALA YD+DTPDRW NVA+A+GGK+ EEV+RHY+LL+ DV  IESG+ P P   S GN
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN

Q9SIJ5 Protein RADIALIS-like 27.7e-2566.67Show/hide
Query:  SMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN
        SMS++GSG WT KQNKAFE ALA+YD+DTPDRW NVA+A+GGKT EE KR Y LL+ D++ IE+G VPFP Y+++ GN
Subjt:  SMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 52.8e-2265.28Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP
        MAS S   S  WT+KQNK FE ALA+YDKDTPDRW NVAKA+G K+ EEVKRHY +L+ED+ +IE   VP P
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP

AT1G75250.1 RAD-like 67.4e-2362.5Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN
        MAS S      WT  QNK FE ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED+ +IE+G+VP P Y++   N
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN

AT1G75250.2 RAD-like 67.4e-2362.5Show/hide
Query:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN
        MAS S      WT  QNK FE ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED+ +IE+G+VP P Y++   N
Subjt:  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN

AT2G21650.1 Homeodomain-like superfamily protein5.5e-2666.67Show/hide
Query:  SMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN
        SMS++GSG WT KQNKAFE ALA+YD+DTPDRW NVA+A+GGKT EE KR Y LL+ D++ IE+G VPFP Y+++ GN
Subjt:  SMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRGN

AT4G39250.1 RAD-like 11.1e-2669.23Show/hide
Query:  ASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRG
        +SMS+  SG WTAKQNKAFE+ALA YD+DTP+RW NVAK +GGKT EEVKRHY+LL++D+  IE+G VPFP YR+S G
Subjt:  ASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFP-YRSSRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATGTCAGCTCATGGTTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAGGAAGCTTTGGCAATGTATGATAAAGACACACCTGATAGATGGTTGAA
TGTTGCAAAAGCCATTGGTGGAAAAACAGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTTTGGAAGATGTTAAGCATATTGAGTCTGGCAAAGTTCCTTTTCCTTATA
GAAGCTCAAGAGGCAATTAA
mRNA sequenceShow/hide mRNA sequence
TTCATATCCTTTTTCCTTTAAACACAAACATTGAATTCTTTTTATTCTAACCCTTTTTTTATAGTTTTTCTCTCCCCATTATTTGAAACCCAATTAAAGTTAGAAATATA
CATTTAAGAAAATTAAATTATGGCTTCAATGTCAGCTCATGGTTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAGGAAGCTTTGGCAATGTATGATAAAGACA
CACCTGATAGATGGTTGAATGTTGCAAAAGCCATTGGTGGAAAAACAGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTTTGGAAGATGTTAAGCATATTGAGTCTGGC
AAAGTTCCTTTTCCTTATAGAAGCTCAAGAGGCAATTAAGGGCCACTTAACATATGATCAAAATATGGAGGATGAGAAGCATGAAGTTGAATGAAAGCCAGGTGCAGTAC
TGGAAGAATAAAAAGGAAAGAGCCATTTTCTTGCTGTTGCACCTTTTTTTTCTAACAAAACAGGAACATATATATATATATATTTGAATTTCTCTATTGTATCTCTTCAA
ATCCAATTGTAATAGTCAAATGAATAAGCCTTCATGAATTTATTGTATTAAATCAAATCATCAATATTATGATTTATATTGAGATTTGAAGAGGCTTTTAAT
Protein sequenceShow/hide protein sequence
MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRGN