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PI0015112 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015112
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr01:6874494..6875539
RNA-Seq ExpressionPI0015112
SyntenyPI0015112
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]3.7e-0926.43Show/hide
Query:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLE------------------------------------------
        MANAQ + +  S ++   FS P L+Q+LN + T+KL R NYLLW+T+ LPIL+ +KLE                                          
Subjt:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLE------------------------------------------

Query:  ----------------------------------------------------------------------------------------GMDGSLVPERAL
                                                                                                G  GS VP RAL
Subjt:  ----------------------------------------------------------------------------------------GMDGSLVPERAL

Query:  VFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYE-----QTDFSKYSEDNNSSNGPSVNMA-----SGRGNNSGQR
        + QVLLGLDE YN V+  IQ +P ISWLDMQSKLL +E     Q    K  +  N +  P++NMA     +G+ N+S ++
Subjt:  VFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYE-----QTDFSKYSEDNNSSNGPSVNMA-----SGRGNNSGQR

KAA0043233.1 hypothetical protein E6C27_scaffold110G001150 [Cucumis melo var. makuwa]1.2e-1032.67Show/hide
Query:  SSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKL---------------------------EGMDGSLV-----------------
        ++ +++ P FS   L+Q+LNH+TT+KL + NYL  +T+ LP L+ +KL                           EG + ++                  
Subjt:  SSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKL---------------------------EGMDGSLV-----------------

Query:  -------------PERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQS
                      ERAL+ QVLLG+DE YNP++A IQ +P ISWLDMQS
Subjt:  -------------PERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQS

KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]5.7e-1052.5Show/hide
Query:  GMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDN--NSSNGPSVNMASGRGNN
        G   S +P RAL+ QVLLGLDE YNPV+  IQ +P ISWLDMQSKLL +E+    + S+ N  N     ++NMA  R NN
Subjt:  GMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDN--NSSNGPSVNMASGRGNN

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]1.3e-0946.46Show/hide
Query:  LPILRSHKLE-GMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDNNSSNGPSVNMASGR-GNNSGQRVRAQV
        L ++++H    G+ GS VP RALV QVLLGLDE++NP VATIQ R  ISW +MQ++LL++E+    + + +NN   G   N    R  NNS  R   QV
Subjt:  LPILRSHKLE-GMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDNNSSNGPSVNMASGR-GNNSGQRVRAQV

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]1.7e-0961.54Show/hide
Query:  GSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDNNSSNGPS
        GS VP RALV QVLLGLDE+YN +VATIQ R  +SWLDMQSKLL YE+    + ++ NN+   PS
Subjt:  GSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDNNSSNGPS

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein2.8e-1052.5Show/hide
Query:  GMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDN--NSSNGPSVNMASGRGNN
        G   S +P RAL+ QVLLGLDE YNPV+  IQ +P ISWLDMQSKLL +E+    + S+ N  N     ++NMA  R NN
Subjt:  GMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQTDFSKYSEDN--NSSNGPSVNMASGRGNN

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X13.1e-0928.1Show/hide
Query:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLEG-----------------------------------------
        MANAQ + +  S ++   FS P L+Q+LN +TT+KL R NYLLW+T+ LPIL+ +KLEG                                         
Subjt:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLEG-----------------------------------------

Query:  -------------------MDGSLVPE---------------------------------RALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSY
                           +  S+ P+                                 R ++     GLDE YN V+  IQ +P ISWLDMQSKLL +
Subjt:  -------------------MDGSLVPE---------------------------------RALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSY

Query:  EQTDFSKYSEDNNSSN---GPSVNMASGRGNNSGQRVRAQVK
        E+    + ++  N+ N    P++NMA  R   +GQR ++  K
Subjt:  EQTDFSKYSEDNNSSN---GPSVNMASGRGNNSGQRVRAQVK

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X43.1e-0928.1Show/hide
Query:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLEG-----------------------------------------
        MANAQ + +  S ++   FS P L+Q+LN +TT+KL R NYLLW+T+ LPIL+ +KLEG                                         
Subjt:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLEG-----------------------------------------

Query:  -------------------MDGSLVPE---------------------------------RALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSY
                           +  S+ P+                                 R ++     GLDE YN V+  IQ +P ISWLDMQSKLL +
Subjt:  -------------------MDGSLVPE---------------------------------RALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSY

Query:  EQTDFSKYSEDNNSSN---GPSVNMASGRGNNSGQRVRAQVK
        E+    + ++  N+ N    P++NMA  R   +GQR ++  K
Subjt:  EQTDFSKYSEDNNSSN---GPSVNMASGRGNNSGQRVRAQVK

A0A5A7SIT7 Uncharacterized protein1.8e-0926.43Show/hide
Query:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLE------------------------------------------
        MANAQ + +  S ++   FS P L+Q+LN + T+KL R NYLLW+T+ LPIL+ +KLE                                          
Subjt:  MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLE------------------------------------------

Query:  ----------------------------------------------------------------------------------------GMDGSLVPERAL
                                                                                                G  GS VP RAL
Subjt:  ----------------------------------------------------------------------------------------GMDGSLVPERAL

Query:  VFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYE-----QTDFSKYSEDNNSSNGPSVNMA-----SGRGNNSGQR
        + QVLLGLDE YN V+  IQ +P ISWLDMQSKLL +E     Q    K  +  N +  P++NMA     +G+ N+S ++
Subjt:  VFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYE-----QTDFSKYSEDNNSSNGPSVNMA-----SGRGNNSGQR

A0A5A7TIN2 Uncharacterized protein5.6e-1132.67Show/hide
Query:  SSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKL---------------------------EGMDGSLV-----------------
        ++ +++ P FS   L+Q+LNH+TT+KL + NYL  +T+ LP L+ +KL                           EG + ++                  
Subjt:  SSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKL---------------------------EGMDGSLV-----------------

Query:  -------------PERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQS
                      ERAL+ QVLLG+DE YNP++A IQ +P ISWLDMQS
Subjt:  -------------PERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCCCAATCATCTGGTTCATCATCCTCCACCATGAACATTCCAAGCTTCAGCACACCTTCCCTAGATCAACTTCTGAACCATGTAACAACAATCAAGCTTGG
TAGAGGAAATTATTTGTTGTGGAGGACCATTGGCCTTCCCATCCTGAGGAGCCATAAACTTGAAGGGATGGATGGAAGTCTCGTTCCAGAGAGAGCCCTAGTTTTTCAAG
TTTTATTGGGACTTGATGAAGATTATAACCCAGTGGTGGCTACCATTCAAGCAAGACCAACCATCTCTTGGCTAGATATGCAGTCTAAACTACTTTCATACGAACAGACT
GATTTTTCAAAATACTCAGAGGACAACAACTCAAGCAATGGACCTTCAGTCAACATGGCCAGTGGAAGAGGAAACAATAGTGGACAAAGGGTCAGGGCTCAAGTCAAAAT
AATAGTGGAAGATCATCATTTAATGGACAACGAGGAGGCAGAGGCCGTGGAAGAGGACGTTATCGTCCGACTTGCCAAAAATGTGGAAAAATTGGGCATACTGCAGACAT
ATGTTATAATAGATTCAACAAAGAGTTTGGTGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCCCAATCATCTGGTTCATCATCCTCCACCATGAACATTCCAAGCTTCAGCACACCTTCCCTAGATCAACTTCTGAACCATGTAACAACAATCAAGCTTGG
TAGAGGAAATTATTTGTTGTGGAGGACCATTGGCCTTCCCATCCTGAGGAGCCATAAACTTGAAGGGATGGATGGAAGTCTCGTTCCAGAGAGAGCCCTAGTTTTTCAAG
TTTTATTGGGACTTGATGAAGATTATAACCCAGTGGTGGCTACCATTCAAGCAAGACCAACCATCTCTTGGCTAGATATGCAGTCTAAACTACTTTCATACGAACAGACT
GATTTTTCAAAATACTCAGAGGACAACAACTCAAGCAATGGACCTTCAGTCAACATGGCCAGTGGAAGAGGAAACAATAGTGGACAAAGGGTCAGGGCTCAAGTCAAAAT
AATAGTGGAAGATCATCATTTAATGGACAACGAGGAGGCAGAGGCCGTGGAAGAGGACGTTATCGTCCGACTTGCCAAAAATGTGGAAAAATTGGGCATACTGCAGACAT
ATGTTATAATAGATTCAACAAAGAGTTTGGTGCTCTAA
Protein sequenceShow/hide protein sequence
MANAQSSGSSSSTMNIPSFSTPSLDQLLNHVTTIKLGRGNYLLWRTIGLPILRSHKLEGMDGSLVPERALVFQVLLGLDEDYNPVVATIQARPTISWLDMQSKLLSYEQT
DFSKYSEDNNSSNGPSVNMASGRGNNSGQRVRAQVKIIVEDHHLMDNEEAEAVEEDVIVRLAKNVEKLGILQTYVIIDSTKSLVL