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PI0015148 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015148
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr05:9466969..9467997
RNA-Seq ExpressionPI0015148
SyntenyPI0015148
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041246.1 uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa]6.2e-2869.09Show/hide
Query:  NDAFLQSQTSSIHNLEVQLGQLASDFSGRPQGSLPSNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHSTAEIGSSSNISDPVHFSLTNN
        NDA LQSQ SSI NLE+QLGQL S+ S RP+GSLPSNTET NQ  GSGKEK  VVTLRS RNLTI +P  ER N TS ST +IGS+SN S+P++ SLTNN
Subjt:  NDAFLQSQTSSIHNLEVQLGQLASDFSGRPQGSLPSNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHSTAEIGSSSNISDPVHFSLTNN

Query:  ISSSQNKDVP
         SS QNK++P
Subjt:  ISSSQNKDVP

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]2.1e-1547.12Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRR---GGRGRSEEGMDKNTVKNDAFLQSQTSS
        +V+AC H+GI +C+LME FYF L++  QQT D VFVGG+L+ SYNQ KT LDTM +N++E  +D   +++     RGR++EGMD+N +     LQ Q + 
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRR---GGRGRSEEGMDKNTVKNDAFLQSQTSS

Query:  IHNL
        ++ L
Subjt:  IHNL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]7.0e-2434.41Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNR------RGGRGRSEEGMD-------------
        M++ CPH+ IPEC+LME FYFGL+K T Q+A+ VF GGML+ SYNQIK  LDTMA+N++EW ++ FG+R      +G RGR E+G+D             
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNR------RGGRGRSEEGMD-------------

Query:  KNTVKNDAFLQ------------------------------------------------------------SQTSSIHNLEVQLGQLASDFSGRPQGSLP
         N +++ A LQ                                                            SQ SSI N+E+QLGQL SDFS RP+ S P
Subjt:  KNTVKNDAFLQ------------------------------------------------------------SQTSSIHNLEVQLGQLASDFSGRPQGSLP

Query:  SNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHST--AEIGSSSN--ISDPVHFSLTNNISSSQNKDVP
        SNTET NQ R                     DP+    N    ST   E G  SN   SD     +   +  S++  VP
Subjt:  SNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHST--AEIGSSSN--ISDPVHFSLTNNISSSQNKDVP

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]3.0e-2256.44Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRGRSEEGMDKNTVKNDAFLQSQTSSIHN
        +V+ACP +GIPEC+ MEVFYFGL+K T Q  + +FVGGML+ SYNQIK TLD+M+NN++EWD+  FG+R   RGR++EG+DK+ V     LQ Q  +++N
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRGRSEEGMDKNTVKNDAFLQSQTSSIHN

Query:  L
        L
Subjt:  L

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]1.3e-1732.89Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRR------------------------------
        +++ CPH+GIP CI ME FY GLN A++   D    G +L KSYN+    L+T+A+NN +W        R                              
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRR------------------------------

Query:  GGRGRS----------------------------------EEGMDKNTVKNDAFLQSQTSSIHNLEVQLGQLASDFSGRPQGSLPSNTETLNQARGSGKE
        GG+G S                                  E  M     KNDA +QSQ +S+ NLE+QLG LA++   RPQGSLPS+TE     R  GKE
Subjt:  GGRGRS----------------------------------EEGMDKNTVKNDAFLQSQTSSIHNLEVQLGQLASDFSGRPQGSLPSNTETLNQARGSGKE

Query:  KYHVVTLRSGRNLTICDPDTERS-NPTS
        +   + LRSG++L   + + + S  PTS
Subjt:  KYHVVTLRSGRNLTICDPDTERS-NPTS

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.4e-2256.44Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRGRSEEGMDKNTVKNDAFLQSQTSSIHN
        +V+ACP +GIPEC+ MEVFYFGL+K T Q  + +FVGGML+ SYNQIK TLD+M+NN++EWD+  FG+R   RGR++EG+DK+ V     LQ Q  +++N
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRGRSEEGMDKNTVKNDAFLQSQTSSIHN

Query:  L
        L
Subjt:  L

A0A0A0L0Y4 Uncharacterized protein5.5e-1443.27Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRG-RSEEGMDKNTVKNDAF--LQSQTSS
        M++ C H+ I  C+++E FYFGL++ TQQ  D VF+GGML+ S N IKTTLD M +N++EW +++FG+    +G R E+G        +A   LQSQ + 
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRG-RSEEGMDKNTVKNDAF--LQSQTSS

Query:  IHNL
        ++ L
Subjt:  IHNL

A0A5A7TGS2 Uncharacterized protein3.0e-2869.09Show/hide
Query:  NDAFLQSQTSSIHNLEVQLGQLASDFSGRPQGSLPSNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHSTAEIGSSSNISDPVHFSLTNN
        NDA LQSQ SSI NLE+QLGQL S+ S RP+GSLPSNTET NQ  GSGKEK  VVTLRS RNLTI +P  ER N TS ST +IGS+SN S+P++ SLTNN
Subjt:  NDAFLQSQTSSIHNLEVQLGQLASDFSGRPQGSLPSNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHSTAEIGSSSNISDPVHFSLTNN

Query:  ISSSQNKDVP
         SS QNK++P
Subjt:  ISSSQNKDVP

A0A5A7TUE1 Uncharacterized protein1.0e-1547.12Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRR---GGRGRSEEGMDKNTVKNDAFLQSQTSS
        +V+AC H+GI +C+LME FYF L++  QQT D VFVGG+L+ SYNQ KT LDTM +N++E  +D   +++     RGR++EGMD+N +     LQ Q + 
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRR---GGRGRSEEGMDKNTVKNDAFLQSQTSS

Query:  IHNL
        ++ L
Subjt:  IHNL

A0A5D3CC26 Uncharacterized protein3.4e-2434.41Show/hide
Query:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNR------RGGRGRSEEGMD-------------
        M++ CPH+ IPEC+LME FYFGL+K T Q+A+ VF GGML+ SYNQIK  LDTMA+N++EW ++ FG+R      +G RGR E+G+D             
Subjt:  MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNR------RGGRGRSEEGMD-------------

Query:  KNTVKNDAFLQ------------------------------------------------------------SQTSSIHNLEVQLGQLASDFSGRPQGSLP
         N +++ A LQ                                                            SQ SSI N+E+QLGQL SDFS RP+ S P
Subjt:  KNTVKNDAFLQ------------------------------------------------------------SQTSSIHNLEVQLGQLASDFSGRPQGSLP

Query:  SNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHST--AEIGSSSN--ISDPVHFSLTNNISSSQNKDVP
        SNTET NQ R                     DP+    N    ST   E G  SN   SD     +   +  S++  VP
Subjt:  SNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHST--AEIGSSSN--ISDPVHFSLTNNISSSQNKDVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAAGCATGCCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTGTTCTATTTTGGCTTGAACAAGGCAACACAGCAGACTGCTGATGATGTGTTTGTAGG
TGGTATGTTGAAAAAATCCTACAACCAGATTAAGACAACGCTGGACACGATGGCCAACAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGTCGAGGAGGACGTG
GACGAAGCGAAGAAGGAATGGATAAGAACACTGTGAAGAATGATGCCTTTCTACAAAGCCAAACTTCATCAATTCACAATCTGGAAGTACAATTAGGGCAGCTAGCCAGC
GACTTCTCCGGAAGACCACAAGGATCCCTCCCAAGTAATACAGAAACGCTAAATCAGGCGAGGGGATCTGGAAAAGAGAAGTATCACGTGGTGACACTACGAAGCGGAAG
GAATTTGACCATCTGTGATCCTGATACTGAACGTAGCAATCCCACTTCTCATTCTACTGCCGAGATTGGCAGCTCAAGTAACATTTCTGATCCTGTACATTTCTCTTTAA
CTAACAATATTTCTTCCTCGCAAAATAAAGACGTGCCAACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAAGCATGCCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTGTTCTATTTTGGCTTGAACAAGGCAACACAGCAGACTGCTGATGATGTGTTTGTAGG
TGGTATGTTGAAAAAATCCTACAACCAGATTAAGACAACGCTGGACACGATGGCCAACAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGTCGAGGAGGACGTG
GACGAAGCGAAGAAGGAATGGATAAGAACACTGTGAAGAATGATGCCTTTCTACAAAGCCAAACTTCATCAATTCACAATCTGGAAGTACAATTAGGGCAGCTAGCCAGC
GACTTCTCCGGAAGACCACAAGGATCCCTCCCAAGTAATACAGAAACGCTAAATCAGGCGAGGGGATCTGGAAAAGAGAAGTATCACGTGGTGACACTACGAAGCGGAAG
GAATTTGACCATCTGTGATCCTGATACTGAACGTAGCAATCCCACTTCTCATTCTACTGCCGAGATTGGCAGCTCAAGTAACATTTCTGATCCTGTACATTTCTCTTTAA
CTAACAATATTTCTTCCTCGCAAAATAAAGACGTGCCAACGTGA
Protein sequenceShow/hide protein sequence
MVQACPHNGIPECILMEVFYFGLNKATQQTADDVFVGGMLKKSYNQIKTTLDTMANNNEEWDEDDFGNRRGGRGRSEEGMDKNTVKNDAFLQSQTSSIHNLEVQLGQLAS
DFSGRPQGSLPSNTETLNQARGSGKEKYHVVTLRSGRNLTICDPDTERSNPTSHSTAEIGSSSNISDPVHFSLTNNISSSQNKDVPT