; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015216 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015216
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:24855117..24855922
RNA-Seq ExpressionPI0015216
SyntenyPI0015216
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-6856.96Show/hide
Query:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI
        ++S+RAP+H WT+EEE  LVECL+ELVS GGW+S+NGTFRPGYLAQL  MMAEKLP   ++ ++ IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +CI
Subjt:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI

Query:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR
        +AE+ELFD+WV+     KG        YD+L YVFGRDRA    +ETF DVGSN      D   +GD  +ED P +YSQ VD+S DD+  +   R+SEGR
Subjt:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR

Query:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
          +SGSKRKRG Q    +E I  A+D  N+QL+ IA+
Subjt:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

KAA0033744.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-6856.96Show/hide
Query:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI
        ++S+RAP+H WT+EEE  LVECL+ELVS GGW+S+NGTFRPGYLAQL  MMAEKLP   ++ ++ IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +CI
Subjt:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI

Query:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR
        +AE+ELFD+WV+     KG        YD+L YVFGRDRA    +ETF DVGSN      D   +GD  +ED P +YSQ VD+S DD+  +   R+SEGR
Subjt:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR

Query:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
          +SGSKRKRG Q    +E I  A+D  N+QL+ IA+
Subjt:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

KAA0041588.1 retrotransposon protein [Cucumis melo var. makuwa]3.3e-6856.54Show/hide
Query:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI
        ++S+RAP+H WT+EEE  LVECL+ELVS GGW+S+NGTFRPGYLAQL  MMAEKLP   ++ ++ IDCR+K+LK+T+QAI EMRGP+CSGFGWN+E +CI
Subjt:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI

Query:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR
        +AE+ELFD+WV+     KG        YD+L YVFGRDRA +  +ETF DVGSN      D   +GD  +ED P +YSQ VD+S DD+  +   R+SEGR
Subjt:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR

Query:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
          +SGSKRKRG Q    +E I  A+D  N+QL+ IA+
Subjt:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-6971.43Show/hide
Query:  DRTTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEY
        D+ TSSSRA KHTWTKEEEAKLVECLVELVS+GGWRSNNGTFR GYLAQLQ MM +KL DTNIQGS  +DCRVKSLKK   +   MRGPSCSGFGWNE++
Subjt:  DRTTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEY

Query:  QCIIAERELFDSWVKPKG-----FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPD
        QCIIAER+LFD+WVK         +     YDDL YVF +DRA EAR ETF DVGSNVLN  ND VPLGD +D+DIP MYSQ V +SPD
Subjt:  QCIIAERELFDSWVKPKG-----FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPD

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]4.1e-9575.42Show/hide
Query:  SSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCII
        S SRAPKHTWTKEEE K VECLVELVSSGGWRS+NGTF+PGYLAQLQ MMAEKLP TNIQ SSTIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCII
Subjt:  SSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCII

Query:  AERELFDSWVK----PKG-FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRN
        AER+LFDSW+K     KG  +     YDDL YVFG+DRA  ARSETF +VGSNV N  ND +PLGD HDEDIPTMYSQ V MSPD+M G  AG++SE RN
Subjt:  AERELFDSWVK----PKG-FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRN

Query:  CASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
        C+S SKRKRG + YET+EVIR+ M+F N+QLKAIAD
Subjt:  CASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859532.0e-9575.42Show/hide
Query:  SSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCII
        S SRAPKHTWTKEEE K VECLVELVSSGGWRS+NGTF+PGYLAQLQ MMAEKLP TNIQ SSTIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCII
Subjt:  SSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCII

Query:  AERELFDSWVK----PKG-FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRN
        AER+LFDSW+K     KG  +     YDDL YVFG+DRA  ARSETF +VGSNV N  ND +PLGD HDEDIPTMYSQ V MSPD+M G  AG++SE RN
Subjt:  AERELFDSWVK----PKG-FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRN

Query:  CASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
        C+S SKRKRG + YET+EVIR+ M+F N+QLKAIAD
Subjt:  CASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

A0A5A7TJS2 Retrotransposon protein8.4e-7071.43Show/hide
Query:  DRTTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEY
        D+ TSSSRA KHTWTKEEEAKLVECLVELVS+GGWRSNNGTFR GYLAQLQ MM +KL DTNIQGS  +DCRVKSLKK   +   MRGPSCSGFGWNE++
Subjt:  DRTTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEY

Query:  QCIIAERELFDSWVKPKG-----FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPD
        QCIIAER+LFD+WVK         +     YDDL YVF +DRA EAR ETF DVGSNVLN  ND VPLGD +D+DIP MYSQ V +SPD
Subjt:  QCIIAERELFDSWVKPKG-----FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPD

A0A5A7TRV1 Retrotransposon protein1.6e-6856.96Show/hide
Query:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI
        ++S+RAP+H WT+EEE  LVECL+ELVS GGW+S+NGTFRPGYLAQL  MMAEKLP   ++ ++ IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +CI
Subjt:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI

Query:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR
        +AE+ELFD+WV+     KG        YD+L YVFGRDRA    +ETF DVGSN      D   +GD  +ED P +YSQ VD+S DD+  +   R+SEGR
Subjt:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR

Query:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
          +SGSKRKRG Q    +E I  A+D  N+QL+ IA+
Subjt:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

A0A5A7U0H7 Retrotransposon protein2.0e-9575.42Show/hide
Query:  SSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCII
        S SRAPKHTWTKEEE K VECLVELVSSGGWRS+NGTF+PGYLAQLQ MMAEKLP TNIQ SSTIDC VKSLKKTY AIAEMRGPSCSGFGWNEE+QCII
Subjt:  SSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCII

Query:  AERELFDSWVK----PKG-FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRN
        AER+LFDSW+K     KG  +     YDDL YVFG+DRA  ARSETF +VGSNV N  ND +PLGD HDEDIPTMYSQ V MSPD+M G  AG++SE RN
Subjt:  AERELFDSWVK----PKG-FYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRN

Query:  CASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
        C+S SKRKRG + YET+EVIR+ M+F N+QLKAIAD
Subjt:  CASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

A0A5D3DCZ1 Retrotransposon protein1.6e-6856.96Show/hide
Query:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI
        ++S+RAP+H WT+EEE  LVECL+ELVS GGW+S+NGTFRPGYLAQL  MMAEKLP   ++ ++ IDCR+K+LK+T+QAIAEMRGP+CSGFGWN+E +CI
Subjt:  TSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCI

Query:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR
        +AE+ELFD+WV+     KG        YD+L YVFGRDRA    +ETF DVGSN      D   +GD  +ED P +YSQ VD+S DD+  +   R+SEGR
Subjt:  IAERELFDSWVK----PKGFYT-IISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGR

Query:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD
          +SGSKRKRG Q    +E I  A+D  N+QL+ IA+
Subjt:  NCASGSKRKRGGQHYETMEVIRNAMDFANDQLKAIAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATAGAACGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTGGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGATG
GAGGTCAAATAATGGGACATTTCGACCTGGATACTTGGCACAATTACAATGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCGTCGACTATTGATTGTC
GTGTCAAATCCCTTAAGAAAACCTATCAAGCAATTGCAGAAATGAGGGGGCCATCTTGTAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATTGCAGAACGAGAG
TTGTTTGATAGTTGGGTCAAGCCAAAGGGCTTCTACACAATCATTTCCATATATGACGATCTGTTGTATGTCTTCGGCAGAGATCGGGCAATAGAAGCACGTTCAGAGAC
CTTTGTTGACGTGGGATCTAATGTGCTAAACAGTTTAAATGACGATGTTCCACTTGGTGATTTACATGATGAAGACATCCCGACGATGTATAGCCAAAGAGTGGATATGT
CACCAGATGACATGTTAGGAACATGTGCAGGTCGATCAAGTGAAGGACGAAATTGTGCAAGTGGAAGTAAGAGGAAACGAGGTGGCCAACATTATGAAACAATGGAGGTG
ATCAGGAATGCAATGGACTTTGCAAACGATCAATTAAAAGCAATTGCAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGATAGAACGACAAGTTCTTCAAGAGCACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAGTTGGTGGAGTGCTTGGTGGAATTGGTTTCATCTGGTGGATG
GAGGTCAAATAATGGGACATTTCGACCTGGATACTTGGCACAATTACAATGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCGTCGACTATTGATTGTC
GTGTCAAATCCCTTAAGAAAACCTATCAAGCAATTGCAGAAATGAGGGGGCCATCTTGTAGTGGGTTTGGATGGAATGAAGAATATCAATGCATCATTGCAGAACGAGAG
TTGTTTGATAGTTGGGTCAAGCCAAAGGGCTTCTACACAATCATTTCCATATATGACGATCTGTTGTATGTCTTCGGCAGAGATCGGGCAATAGAAGCACGTTCAGAGAC
CTTTGTTGACGTGGGATCTAATGTGCTAAACAGTTTAAATGACGATGTTCCACTTGGTGATTTACATGATGAAGACATCCCGACGATGTATAGCCAAAGAGTGGATATGT
CACCAGATGACATGTTAGGAACATGTGCAGGTCGATCAAGTGAAGGACGAAATTGTGCAAGTGGAAGTAAGAGGAAACGAGGTGGCCAACATTATGAAACAATGGAGGTG
ATCAGGAATGCAATGGACTTTGCAAACGATCAATTAAAAGCAATTGCAGATTGA
Protein sequenceShow/hide protein sequence
MDDRTTSSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSNNGTFRPGYLAQLQWMMAEKLPDTNIQGSSTIDCRVKSLKKTYQAIAEMRGPSCSGFGWNEEYQCIIAERE
LFDSWVKPKGFYTIISIYDDLLYVFGRDRAIEARSETFVDVGSNVLNSLNDDVPLGDLHDEDIPTMYSQRVDMSPDDMLGTCAGRSSEGRNCASGSKRKRGGQHYETMEV
IRNAMDFANDQLKAIAD