; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015224 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015224
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:24508556..24509743
RNA-Seq ExpressionPI0015224
SyntenyPI0015224
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.0e-14472.47Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY
        MRSF IGRKLWRIVTGDITKPVKP         + ET+ E+ +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AKELWDFL TRFQSIGLAHYY
Subjt:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY

Query:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH
        QLHS LVSLNQE+GQSVNEYLATLQPIWTQLDQAKIS DHIRLIKVLMGLR EYE  RAALLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD ALATTH
Subjt:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH

Query:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA
         R  NE                                                       GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA
Subjt:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA

Query:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV
        LA T GTSWLLDSACCNH+TSDISLLSS  PVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQV
Subjt:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.4e-14472.73Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY
        MRSF IGRKLWRIVTGDITKPVKP         + ET+ E+ +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AKELWDFL TRFQSIGLAHYY
Subjt:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY

Query:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH
        QLHS LVSLNQE+GQSVNEYLATLQPIWTQLDQAKIS DHIRLIKVLMGLR EYES RAALLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD ALATTH
Subjt:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH

Query:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA
         R  NE                                                       GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA
Subjt:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA

Query:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV
        LA T GTSWLLDSACCNH+TSDISLLSS  PVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQV
Subjt:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV

KAA0047794.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.8e-12664.84Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKP-----------TKNDDVDTT---IQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDF
        MRSF IGRKLWRIVTGDITKPVKP           T+++D +T+   + E T E+ +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AKELW+F
Subjt:  MRSFFIGRKLWRIVTGDITKPVKP-----------TKNDDVDTT---IQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDF

Query:  LSTRFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGI
        L TRFQSIGLAHYYQLHS LV+LNQEVGQSVNEYL T QPIWTQLDQAKIS DHIRLIKVLMGLR+EYES RAALLHRNPLPSLDAAVQEILFEEKRLGI
Subjt:  LSTRFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGI

Query:  SSSMHSDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDL
         SS+ SD ALATTH R  NE                                                       GSSSVVAAATS D T   S QL DL
Subjt:  SSSMHSDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDL

Query:  HDLLKQVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLN
        HDLLKQV+SS STALA T GTSWLLDSACCNH+TSD+SLLSS +PVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHV +     +  GQ+   G  
Subjt:  HDLLKQVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLN

Query:  I
        +
Subjt:  I

KAA0053979.1 Integrase, catalytic core [Cucumis melo var. makuwa]7.4e-13065.68Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKP------TKNDDV---DTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRF
        MRSF IGRKLW IVTGDITKPVKP      T  + +   D    +TT E+ KYIE L+DWD KNHQIITWLGNTSIP IHTQFD FDTAKELWDFL TRF
Subjt:  MRSFFIGRKLWRIVTGDITKPVKP------TKNDDV---DTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRF

Query:  QSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMH
        QSIGLAHYYQLHS LVSLNQEVGQSVNEYLATLQPIWTQL+QAKISLDHI LIKVLMGLR EYES  AALLHRNPLPSLD A+Q+ILFEEKRL I SS+ 
Subjt:  QSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMH

Query:  SDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLK
        SD AL T+  +PT+E                                                       G+SSVVAAAT  D T   +FQL DLHDLLK
Subjt:  SDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLK

Query:  QVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSS
        QVISSNSTALA T GTSWLLD AC NH+TS+   LSS  PVQSLPPIHS  GN+M+ISHIGTV+TPTI L +TYHVPNLTFNLA VGQLCD+GL I+FS 
Subjt:  QVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSS

Query:  NGCQV
        +GCQV
Subjt:  NGCQV

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.3e-14472.73Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY
        MRSF IGRKLWRIVTGDITKPVKP         + ET+ EN +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AK+LWDFL TRFQSIGLAHYY
Subjt:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY

Query:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH
        QLHS LVSLNQEVGQSVNEYLATLQPIWTQLDQAKIS DHIRLIKVLMGLR EYE  RAALLHRN LPSLDAAVQEILFEEKRLGI SS+HSD ALATTH
Subjt:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH

Query:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA
         R  NE                                                       GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA
Subjt:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA

Query:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV
        LA T GTSWLLDSACCNH+TSDISLLSS TPVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQV
Subjt:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-944.4e-14472.47Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY
        MRSF IGRKLWRIVTGDITKPVKP         + ET+ E+ +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AKELWDFL TRFQSIGLAHYY
Subjt:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY

Query:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH
        QLHS LVSLNQE+GQSVNEYLATLQPIWTQLDQAKIS DHIRLIKVLMGLR EYE  RAALLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD ALATTH
Subjt:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH

Query:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA
         R  NE                                                       GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA
Subjt:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA

Query:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV
        LA T GTSWLLDSACCNH+TSDISLLSS  PVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQV
Subjt:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV

A0A5A7TXR0 Putative mitochondrial protein1.8e-12664.84Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKP-----------TKNDDVDTT---IQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDF
        MRSF IGRKLWRIVTGDITKPVKP           T+++D +T+   + E T E+ +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AKELW+F
Subjt:  MRSFFIGRKLWRIVTGDITKPVKP-----------TKNDDVDTT---IQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDF

Query:  LSTRFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGI
        L TRFQSIGLAHYYQLHS LV+LNQEVGQSVNEYL T QPIWTQLDQAKIS DHIRLIKVLMGLR+EYES RAALLHRNPLPSLDAAVQEILFEEKRLGI
Subjt:  LSTRFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGI

Query:  SSSMHSDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDL
         SS+ SD ALATTH R  NE                                                       GSSSVVAAATS D T   S QL DL
Subjt:  SSSMHSDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDL

Query:  HDLLKQVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLN
        HDLLKQV+SS STALA T GTSWLLDSACCNH+TSD+SLLSS +PVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHV +     +  GQ+   G  
Subjt:  HDLLKQVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLN

Query:  I
        +
Subjt:  I

A0A5A7UKE6 Integrase, catalytic core3.6e-13065.68Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKP------TKNDDV---DTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRF
        MRSF IGRKLW IVTGDITKPVKP      T  + +   D    +TT E+ KYIE L+DWD KNHQIITWLGNTSIP IHTQFD FDTAKELWDFL TRF
Subjt:  MRSFFIGRKLWRIVTGDITKPVKP------TKNDDV---DTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRF

Query:  QSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMH
        QSIGLAHYYQLHS LVSLNQEVGQSVNEYLATLQPIWTQL+QAKISLDHI LIKVLMGLR EYES  AALLHRNPLPSLD A+Q+ILFEEKRL I SS+ 
Subjt:  QSIGLAHYYQLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMH

Query:  SDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLK
        SD AL T+  +PT+E                                                       G+SSVVAAAT  D T   +FQL DLHDLLK
Subjt:  SDTALATTHSRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLK

Query:  QVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSS
        QVISSNSTALA T GTSWLLD AC NH+TS+   LSS  PVQSLPPIHS  GN+M+ISHIGTV+TPTI L +TYHVPNLTFNLA VGQLCD+GL I+FS 
Subjt:  QVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSS

Query:  NGCQV
        +GCQV
Subjt:  NGCQV

A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-942.6e-14472.73Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY
        MRSF IGRKLWRIVTGDITKPVKP         + ET+ EN +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AK+LWDFL TRFQSIGLAHYY
Subjt:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY

Query:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH
        QLHS LVSLNQEVGQSVNEYLATLQPIWTQLDQAKIS DHIRLIKVLMGLR EYE  RAALLHRN LPSLDAAVQEILFEEKRLGI SS+HSD ALATTH
Subjt:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH

Query:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA
         R  NE                                                       GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA
Subjt:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA

Query:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV
        LA T GTSWLLDSACCNH+TSDISLLSS TPVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQV
Subjt:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-14472.73Show/hide
Query:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY
        MRSF IGRKLWRIVTGDITKPVKP         + ET+ E+ +YIE L+DWDSKNHQIITWLGNTSIPAIHTQFD FD+AKELWDFL TRFQSIGLAHYY
Subjt:  MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPEN-KYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYY

Query:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH
        QLHS LVSLNQE+GQSVNEYLATLQPIWTQLDQAKIS DHIRLIKVLMGLR EYES RAALLHRNPLPSLDAAVQEILFEEKRLGI SS+HSD ALATTH
Subjt:  QLHSRLVSLNQEVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTH

Query:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA
         R  NE                                                       GSSSVVAAATS  T PS S QL DLHDLLKQVISS STA
Subjt:  SRPTNE-------------------------------------------------------GSSSVVAAATSPDTTPSPSFQLHDLHDLLKQVISSNSTA

Query:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV
        LA T GTSWLLDSACCNH+TSDISLLSS  PVQSLPPIHSADGN M+ISHIGTV+TPTI L +TYHVPNLTFNLASVGQLCDLGL IIFSS+GCQV
Subjt:  LAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLNIIFSSNGCQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTTTTTTTATTGGTCGAAAATTATGGCGCATAGTTACTGGCGACATCACCAAGCCTGTCAAACCCACTAAGAATGATGATGTAGATACTACCATTCAAGAGAC
TACTCCCGAAAACAAGTACATTGAAAGTCTCAAGGACTGGGATAGCAAAAATCATCAAATCATCACATGGTTGGGTAACACCTCTATTCCAGCTATTCATACACAATTTG
ATGTTTTTGACACTGCAAAAGAACTTTGGGATTTTCTATCCACACGCTTTCAATCTATTGGTCTGGCACATTATTATCAATTACATTCTCGCCTTGTTAGTCTAAACCAG
GAAGTTGGACAATCTGTGAATGAATACCTTGCCACTCTTCAGCCCATATGGACTCAGTTAGATCAGGCAAAAATCAGTCTTGATCATATCCGTCTCATCAAAGTACTTAT
GGGACTCCGTACAGAGTATGAATCTTTTCGGGCTGCCCTCTTACACCGCAACCCTCTACCATCTCTTGACGCCGCCGTTCAGGAAATCCTATTTGAGGAGAAAAGACTTG
GCATTAGCTCCTCTATGCACTCTGATACTGCCCTTGCAACCACTCATTCACGGCCTACTAATGAGGGCTCCTCATCTGTGGTTGCTGCTGCCACCTCACCTGACACTACA
CCATCTCCAAGCTTTCAGTTACATGACCTCCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCCCTTGCTGCCACATCAGGTACTTCCTGGCTCCTTGATTC
CGCCTGTTGCAACCATATAACCTCTGACATTTCATTATTGTCCTCCCCTACCCCTGTCCAATCCCTTCCACCAATCCACTCTGCTGATGGTAATCAAATGGCTATTTCTC
ACATTGGAACTGTTCACACACCCACCATCAACCTTTTCCACACTTATCATGTTCCAAATCTAACATTCAACCTAGCCTCTGTTGGCCAATTATGTGACCTTGGACTTAAC
ATTATCTTTTCCTCTAATGGTTGTCAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGTTTTTTTATTGGTCGAAAATTATGGCGCATAGTTACTGGCGACATCACCAAGCCTGTCAAACCCACTAAGAATGATGATGTAGATACTACCATTCAAGAGAC
TACTCCCGAAAACAAGTACATTGAAAGTCTCAAGGACTGGGATAGCAAAAATCATCAAATCATCACATGGTTGGGTAACACCTCTATTCCAGCTATTCATACACAATTTG
ATGTTTTTGACACTGCAAAAGAACTTTGGGATTTTCTATCCACACGCTTTCAATCTATTGGTCTGGCACATTATTATCAATTACATTCTCGCCTTGTTAGTCTAAACCAG
GAAGTTGGACAATCTGTGAATGAATACCTTGCCACTCTTCAGCCCATATGGACTCAGTTAGATCAGGCAAAAATCAGTCTTGATCATATCCGTCTCATCAAAGTACTTAT
GGGACTCCGTACAGAGTATGAATCTTTTCGGGCTGCCCTCTTACACCGCAACCCTCTACCATCTCTTGACGCCGCCGTTCAGGAAATCCTATTTGAGGAGAAAAGACTTG
GCATTAGCTCCTCTATGCACTCTGATACTGCCCTTGCAACCACTCATTCACGGCCTACTAATGAGGGCTCCTCATCTGTGGTTGCTGCTGCCACCTCACCTGACACTACA
CCATCTCCAAGCTTTCAGTTACATGACCTCCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCCCTTGCTGCCACATCAGGTACTTCCTGGCTCCTTGATTC
CGCCTGTTGCAACCATATAACCTCTGACATTTCATTATTGTCCTCCCCTACCCCTGTCCAATCCCTTCCACCAATCCACTCTGCTGATGGTAATCAAATGGCTATTTCTC
ACATTGGAACTGTTCACACACCCACCATCAACCTTTTCCACACTTATCATGTTCCAAATCTAACATTCAACCTAGCCTCTGTTGGCCAATTATGTGACCTTGGACTTAAC
ATTATCTTTTCCTCTAATGGTTGTCAGGTTTAG
Protein sequenceShow/hide protein sequence
MRSFFIGRKLWRIVTGDITKPVKPTKNDDVDTTIQETTPENKYIESLKDWDSKNHQIITWLGNTSIPAIHTQFDVFDTAKELWDFLSTRFQSIGLAHYYQLHSRLVSLNQ
EVGQSVNEYLATLQPIWTQLDQAKISLDHIRLIKVLMGLRTEYESFRAALLHRNPLPSLDAAVQEILFEEKRLGISSSMHSDTALATTHSRPTNEGSSSVVAAATSPDTT
PSPSFQLHDLHDLLKQVISSNSTALAATSGTSWLLDSACCNHITSDISLLSSPTPVQSLPPIHSADGNQMAISHIGTVHTPTINLFHTYHVPNLTFNLASVGQLCDLGLN
IIFSSNGCQV