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PI0015232 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015232
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:19405630..19408102
RNA-Seq ExpressionPI0015232
SyntenyPI0015232
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043275.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-5767.69Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIY SPE LQ ND +T+ S EEEK ++DADEGWTLVT RKK KQNFS+KESR YREY+R GKSQRRKARKN RK  PI EE EELPRS
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        RQPITLKDFF ENF +EIV CH +                TT DDT PS S E T K E+L  + INDLL+L +E KDTI+EILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.3e-5062.56Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSSPE LQ ND R     EEEK V++ +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR  RKN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

KAA0065377.1 uncharacterized protein E6C27_scaffold17G00390 [Cucumis melo var. makuwa]7.7e-5163.08Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSS E LQ ND RT    EEEK V++ +EGWTLVTHRKK KQ+FS+KES  YR Y+ KGKSQRR  +KN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS S E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.3e-5062.56Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSSPE LQ ND R     EEEK V++ +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR  RKN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.3e-5062.56Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSSPE LQ ND R     EEEK V++ +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR  RKN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

TrEMBL top hitse value%identityAlignment
A0A5A7TPD2 Ty3-gypsy retrotransposon protein1.2e-5767.69Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIY SPE LQ ND +T+ S EEEK ++DADEGWTLVT RKK KQNFS+KESR YREY+R GKSQRRKARKN RK  PI EE EELPRS
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        RQPITLKDFF ENF +EIV CH +                TT DDT PS S E T K E+L  + INDLL+L +E KDTI+EILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

A0A5A7TZU9 Ribonuclease H6.4e-5162.56Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSSPE LQ ND R     EEEK V++ +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR  RKN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

A0A5A7VE63 Uncharacterized protein3.7e-5163.08Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSS E LQ ND RT    EEEK V++ +EGWTLVTHRKK KQ+FS+KES  YR Y+ KGKSQRR  +KN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS S E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

A0A5D3BIH8 Uncharacterized protein6.4e-5162.56Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSSPE LQ ND R     EEEK V++ +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR  RKN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

A0A5D3D1E5 Ribonuclease H6.4e-5162.56Show/hide
Query:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS
        GSLIQFGSLEPVVIYSSPE LQ ND R     EEEK V++ +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR  RKN RKF PI EE E L R 
Subjt:  GSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITEEGEELPRS

Query:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS
        R+PI LKDFFP+NFP+EIV CH  ST E               +D  PS + E T K E+L  + INDLL+L RE+KDTIIEILKNDDVSTI  S
Subjt:  RQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVSTIPAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGAAAGAATGTGGAGTCAAGCCGCAGAATGCAATTGCTTGCATTCATTGGCTCTTTTACAAGTTAGGGGAATATTATGAAGGTAGTCTAATCCAATTTGGATC
TTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAAAGAAATGACATCCGAACTGTTCACTCAAACGAAGAAGAAAAGCACGTGGAGGATGCTGACGAGGGAT
GGACGCTAGTAACGCATCGAAAGAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAGCAAGG
AAGAATGCAAGGAAGTTTCAACCAATCACCGAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAAT
TGTTTTGTGCCATGTTGTTAGTACAATTGAGGATGACACTTCTACCTCAAATTCCGCAGAATTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCCACAGAAGCAA
CAACCAAGCTAGAGGAATTGCCTTTTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGAGATATTAAAAAATGATGATGTCTCAACT
ATTCCTGCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGAAAGAATGTGGAGTCAAGCCGCAGAATGCAATTGCTTGCATTCATTGGCTCTTTTACAAGTTAGGGGAATATTATGAAGGTAGTCTAATCCAATTTGGATC
TTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAAAGAAATGACATCCGAACTGTTCACTCAAACGAAGAAGAAAAGCACGTGGAGGATGCTGACGAGGGAT
GGACGCTAGTAACGCATCGAAAGAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAGCAAGG
AAGAATGCAAGGAAGTTTCAACCAATCACCGAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAAT
TGTTTTGTGCCATGTTGTTAGTACAATTGAGGATGACACTTCTACCTCAAATTCCGCAGAATTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCCACAGAAGCAA
CAACCAAGCTAGAGGAATTGCCTTTTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGAGATATTAAAAAATGATGATGTCTCAACT
ATTCCTGCATCATAA
Protein sequenceShow/hide protein sequence
MNKKECGVKPQNAIACIHWLFYKLGEYYEGSLIQFGSLEPVVIYSSPEVLQRNDIRTVHSNEEEKHVEDADEGWTLVTHRKKHKQNFSKKESRLYREYKRKGKSQRRKAR
KNARKFQPITEEGEELPRSRQPITLKDFFPENFPLEIVLCHVVSTIEDDTSTSNSAEFSTTGDDTSPSKSTEATTKLEELPFMDINDLLSLPREIKDTIIEILKNDDVST
IPAS