; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015288 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015288
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr06:19591787..19594137
RNA-Seq ExpressionPI0015288
SyntenyPI0015288
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]2.5e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDP+ NTYNSGWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT AISK++GKGKLPAQPD+ANVS ISLRSGKIL+T +  E+ VTS  + LN+ +E+KEEKVETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

KAA0050529.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDPH NTYN GWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL T T+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILETSPS-EENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT AISK++ KGKLPAQPDHANVS ISLRSGKIL+TS + E+ VTS P+  N+ +E+KEEKVETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILETSPS-EENVTSNPILLNNNDETKEEKVETNALPSSS

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.5e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT  ISK++GKGKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.9e-6471.51Show/hide
Query:  TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQN
        TTLLTSFVQG  +KV KCGVCGLVGH N+KCP++IE+ N++ +YDPHSNTYNSGWRDNPNLR GNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ 
Subjt:  TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQN

Query:  EIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
        E+KQQM+ LT AISK++GKGKLPAQ DHANVS ISLRSGKIL+T +  E+ VTS P+ LN+ +E+KEEKVETN  PS+S
Subjt:  EIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]2.5e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT  ISK++GKGKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919101.2e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT  ISK++GKGKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

A0A5A7UAL2 Retrotransposon gag protein1.6e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDPH NTYN GWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL T T+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILETSPS-EENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT AISK++ KGKLPAQPDHANVS ISLRSGKIL+TS + E+ VTS P+  N+ +E+KEEKVETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILETSPS-EENVTSNPILLNNNDETKEEKVETNALPSSS

A0A5A7VQ60 Retrotransposon gag protein1.9e-6471.51Show/hide
Query:  TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQN
        TTLLTSFVQG  +KV KCGVCGLVGH N+KCP++IE+ N++ +YDPHSNTYNSGWRDNPNLR GNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ 
Subjt:  TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQN

Query:  EIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
        E+KQQM+ LT AISK++GKGKLPAQ DHANVS ISLRSGKIL+T +  E+ VTS P+ LN+ +E+KEEKVETN  PS+S
Subjt:  EIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

A0A5D3DCG3 Retrotransposon gag protein1.2e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MT LLTSFVQG  +KV KCGVCGLVGHPNDKCP++IE+ N++ KYDPH NTYNSGWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT  ISK++GKGKL AQPDHANVSVISLRS KIL+T +  E+ VTS P+ LN+ +E+KEEK ETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

E5GBZ4 Retrotransposon gag protein1.2e-6370.56Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ
        MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP++IE+ N++ KYDP+ NTYNSGWRDNPNLR GNDNQ+ +QA  +S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQ

Query:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS
         E+KQQM+ LT AISK++GKGKLPAQPD+ANVS ISLRSGKIL+T +  E+ VTS  + LN+ +E+KEEKVETN  PS+S
Subjt:  NEIKQQMSHLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILET-SPSEENVTSNPILLNNNDETKEEKVETNALPSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTTTACTAACTTCTTTTGTGCAAGGTGGTTCTGTGAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTCGGACATCCGAATGACAAATGCCCAGACTTAATTGA
GGAAGCAAATGTCATATGTAAGTACGATCCCCATAGTAATACTTACAATTCCGGTTGGAGAGACAACCCAAATCTAAGGATGGGAAATGACAACCAAAGACCTTCACAAG
CAACTTCCTCTTCAAACAATCAAGGTACAAATTTAGAAGATTTAGTTAAAGCTCTTACTACTAATACCATCTCTTTTCAAAATGAAATAAAGCAACAAATGTCTCATTTG
ACAAACGCAATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGCACAACCGGATCATGCAAACGTAAGTGTCATCTCACTGAGAAGCGGTAAAATTCTAGAAACCTCTCC
AAGTGAAGAAAATGTAACTTCTAACCCTATCCTTCTTAATAATAATGATGAGACTAAGGAAGAAAAAGTAGAAACAAATGCTCTACCATCCAGTTCCAACAAAGTTCTTC
ACTTCTCATTCTTGCACTCAGCCGCCGAGCAGCACTCTTTCTCCCCAGTTCCCTTGCGTCGTGCGTTGTCTTCGCCGTTCGAAAGCTCTCCGGTCATCGTTTCGCTGGAA
AGGAAGCTTTGGTCTTTGGTTTGGGCGTTCTGGGCTATTTTTGCAAAGTGTGGAGGCGCTTCGTGGCTTTCTCGTCTTGTTGGTTTTCTTTCGGAAATGACACAAAGCCC
CTTCACAAGCCCTTGTGCACAAAAGCAAGCTAAAACAAGCTTCTTGCGGCCAGAAACTGTGAAATACAAATTCGAGGGCAAAATGGTAATTTTCCCGAAAGTATTCAAAA
ACCCTCTTCGCGGCAAAACTACTTCAGAACGCGTAGCTCATCGCAGACTGCCTACTTCGCGAGGCAATGCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTTTACTAACTTCTTTTGTGCAAGGTGGTTCTGTGAAAGTTGCTAAGTGTGGGGTATGCGGTCTAGTCGGACATCCGAATGACAAATGCCCAGACTTAATTGA
GGAAGCAAATGTCATATGTAAGTACGATCCCCATAGTAATACTTACAATTCCGGTTGGAGAGACAACCCAAATCTAAGGATGGGAAATGACAACCAAAGACCTTCACAAG
CAACTTCCTCTTCAAACAATCAAGGTACAAATTTAGAAGATTTAGTTAAAGCTCTTACTACTAATACCATCTCTTTTCAAAATGAAATAAAGCAACAAATGTCTCATTTG
ACAAACGCAATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGCACAACCGGATCATGCAAACGTAAGTGTCATCTCACTGAGAAGCGGTAAAATTCTAGAAACCTCTCC
AAGTGAAGAAAATGTAACTTCTAACCCTATCCTTCTTAATAATAATGATGAGACTAAGGAAGAAAAAGTAGAAACAAATGCTCTACCATCCAGTTCCAACAAAGTTCTTC
ACTTCTCATTCTTGCACTCAGCCGCCGAGCAGCACTCTTTCTCCCCAGTTCCCTTGCGTCGTGCGTTGTCTTCGCCGTTCGAAAGCTCTCCGGTCATCGTTTCGCTGGAA
AGGAAGCTTTGGTCTTTGGTTTGGGCGTTCTGGGCTATTTTTGCAAAGTGTGGAGGCGCTTCGTGGCTTTCTCGTCTTGTTGGTTTTCTTTCGGAAATGACACAAAGCCC
CTTCACAAGCCCTTGTGCACAAAAGCAAGCTAAAACAAGCTTCTTGCGGCCAGAAACTGTGAAATACAAATTCGAGGGCAAAATGGTAATTTTCCCGAAAGTATTCAAAA
ACCCTCTTCGCGGCAAAACTACTTCAGAACGCGTAGCTCATCGCAGACTGCCTACTTCGCGAGGCAATGCTTCATGA
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLIEEANVICKYDPHSNTYNSGWRDNPNLRMGNDNQRPSQATSSSNNQGTNLEDLVKALTTNTISFQNEIKQQMSHL
TNAISKLEGKGKLPAQPDHANVSVISLRSGKILETSPSEENVTSNPILLNNNDETKEEKVETNALPSSSNKVLHFSFLHSAAEQHSFSPVPLRRALSSPFESSPVIVSLE
RKLWSLVWAFWAIFAKCGGASWLSRLVGFLSEMTQSPFTSPCAQKQAKTSFLRPETVKYKFEGKMVIFPKVFKNPLRGKTTSERVAHRRLPTSRGNAS