; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015334 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015334
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:9705664..9707124
RNA-Seq ExpressionPI0015334
SyntenyPI0015334
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]2.4e-5863.92Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MTTLLTSFVQ   +KV KCGVC LVGHPNDKC +++E+ N++RKYDP+ NTYN+GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN
         EMKQQ++QLT AI K++GKGKLPAQPD+ANVSAISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P N+
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.0e-5855.51Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MT LLTSFVQ   +KV KCGVCGLVGHPNDKC +++E+ N+++KYDPH NTYN+GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE
         EMKQQ++QLT  I K++GKGKL AQPDHANVS ISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P+N+      
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE

Query:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID
               + L   E  EE+E++E+    ++NL  +D
Subjt:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.4e-5864.25Show/hide
Query:  TTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQN
        TTLLTSFVQ   +KV KCGVCGLVGH N+KC +++E+ N++R+YDPHSNTYN+GWRDN NLRW NDNQ+  QA S+S+NQG NLED++KALATNT+SFQ 
Subjt:  TTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQN

Query:  EMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN
        EMKQQ++QLT AI K++GKGKLPAQ DHANVSAISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P+N+
Subjt:  EMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]3.4e-5761.86Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MTTLLTSFVQ  ++KV KCGVCGLVG+PNDKC  ++E+ N++R+YDPH NTYN GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN
         +MKQQ++QLT  I K++GKGKLPAQPDH NVSAISLRS KIL+TP+ + K+          KN+ KEEK ET++S S+SK      D+ P+N+
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]4.0e-5855.51Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MT LLTSFVQ   +KV KCGVCGLVGHPNDKC +++E+ N+++KYDPH NTYN+GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE
         EMKQQ++QLT  I K++GKGKL AQPDHANVS ISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P+N+      
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE

Query:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID
               + L   E  EE+E++E+    ++NL  +D
Subjt:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032911.7e-5761.86Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MTTLLTSFVQ  ++KV KCGVCGLVG+PNDKC  ++E+ N++R+YDPH NTYN GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN
         +MKQQ++QLT  I K++GKGKLPAQPDH NVSAISLRS KIL+TP+ + K+          KN+ KEEK ET++S S+SK      D+ P+N+
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN

A0A1S4E3R2 uncharacterized protein LOC1079919102.0e-5855.51Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MT LLTSFVQ   +KV KCGVCGLVGHPNDKC +++E+ N+++KYDPH NTYN+GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE
         EMKQQ++QLT  I K++GKGKL AQPDHANVS ISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P+N+      
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE

Query:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID
               + L   E  EE+E++E+    ++NL  +D
Subjt:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID

A0A5A7VQ60 Retrotransposon gag protein1.1e-5864.25Show/hide
Query:  TTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQN
        TTLLTSFVQ   +KV KCGVCGLVGH N+KC +++E+ N++R+YDPHSNTYN+GWRDN NLRW NDNQ+  QA S+S+NQG NLED++KALATNT+SFQ 
Subjt:  TTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQN

Query:  EMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN
        EMKQQ++QLT AI K++GKGKLPAQ DHANVSAISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P+N+
Subjt:  EMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN

A0A5D3DCG3 Retrotransposon gag protein2.0e-5855.51Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MT LLTSFVQ   +KV KCGVCGLVGHPNDKC +++E+ N+++KYDPH NTYN+GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE
         EMKQQ++QLT  I K++GKGKL AQPDHANVS ISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P+N+      
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQE

Query:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID
               + L   E  EE+E++E+    ++NL  +D
Subjt:  LDEIEENICL--HEFDEEKEIVEVEMNEELNLDGID

E5GBZ4 Retrotransposon gag protein1.1e-5863.92Show/hide
Query:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ
        MTTLLTSFVQ   +KV KCGVC LVGHPNDKC +++E+ N++RKYDP+ NTYN+GWRDN NLRW NDNQ+  QA  +S+NQG NLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN
         EMKQQ++QLT AI K++GKGKLPAQPD+ANVSAISLRS KIL+TP+ + K+          KNE KEEK ET+ SPS+SK      D+ P N+
Subjt:  NEMKQQISQLTNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKE---------DKNEKKEEKSETSTSPSSSKELHDEFDQLPMNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCTTACTAACCTCTTTTGTGCAAAGTGGATCTGTGAAAGTTGCAAAATGCGGGGTGTGCGGTCTAGTTGGACATCCCAATGACAAGTGTCATGACCTTGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACATACAATGCCGGTTGGAGAGACAACTCTAATCTTAGATGGGAAAACGACAACCAAAGACCCGCGCAAG
CAACCTCCTCTTCAAACAATCAAGGTAATAATTTGGAAGACTTAGTTAAAGCTCTTGCTACTAACACAATCTCTTTTCAGAATGAAATGAAACAGCAAATATCTCAACTA
ACAAATGCCATAGGCAAGCTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCTGATCATGCAAACGTAAGTGCCATCTCACTTAGAAGCAGTAAGATTCTGGAAACCCCTTC
AAAGCGAAGAAAAGAAGATAAAAATGAGAAAAAGGAAGAAAAATCAGAAACTAGTACTTCACCATCTTCTTCAAAAGAGTTGCATGATGAATTTGATCAATTGCCTATGA
ATAATGGATTTGCTAAACAAGAGTTAGATGAGATTGAAGAAAATATTTGTTTGCATGAATTTGATGAAGAAAAAGAGATTGTAGAAGTAGAAATGAATGAAGAATTAAAT
CTTGATGGAATAGACCCTAACACTGTTTCCTTTTCTCCCCAGGAACCAGGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACCTTACTAACCTCTTTTGTGCAAAGTGGATCTGTGAAAGTTGCAAAATGCGGGGTGTGCGGTCTAGTTGGACATCCCAATGACAAGTGTCATGACCTTGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACATACAATGCCGGTTGGAGAGACAACTCTAATCTTAGATGGGAAAACGACAACCAAAGACCCGCGCAAG
CAACCTCCTCTTCAAACAATCAAGGTAATAATTTGGAAGACTTAGTTAAAGCTCTTGCTACTAACACAATCTCTTTTCAGAATGAAATGAAACAGCAAATATCTCAACTA
ACAAATGCCATAGGCAAGCTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCTGATCATGCAAACGTAAGTGCCATCTCACTTAGAAGCAGTAAGATTCTGGAAACCCCTTC
AAAGCGAAGAAAAGAAGATAAAAATGAGAAAAAGGAAGAAAAATCAGAAACTAGTACTTCACCATCTTCTTCAAAAGAGTTGCATGATGAATTTGATCAATTGCCTATGA
ATAATGGATTTGCTAAACAAGAGTTAGATGAGATTGAAGAAAATATTTGTTTGCATGAATTTGATGAAGAAAAAGAGATTGTAGAAGTAGAAATGAATGAAGAATTAAAT
CTTGATGGAATAGACCCTAACACTGTTTCCTTTTCTCCCCAGGAACCAGGGATTTAG
Protein sequenceShow/hide protein sequence
MTTLLTSFVQSGSVKVAKCGVCGLVGHPNDKCHDLVEEANVIRKYDPHSNTYNAGWRDNSNLRWENDNQRPAQATSSSNNQGNNLEDLVKALATNTISFQNEMKQQISQL
TNAIGKLEGKGKLPAQPDHANVSAISLRSSKILETPSKRRKEDKNEKKEEKSETSTSPSSSKELHDEFDQLPMNNGFAKQELDEIEENICLHEFDEEKEIVEVEMNEELN
LDGIDPNTVSFSPQEPGI