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PI0015372 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015372
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr01:18847959..18848657
RNA-Seq ExpressionPI0015372
SyntenyPI0015372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]1.2e-0856.6Show/hide
Query:  DEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEAIRS
        DEDP DHIKS Y +CS FH+  ++QE    T F  TLKDD K+WVG+LE  R+
Subjt:  DEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEAIRS

KAA0045508.1 hypothetical protein E6C27_scaffold1202G00600 [Cucumis melo var. makuwa]9.2e-0655.1Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEA
        ED + +IKSFYSI S FH+S +TQ +   TLFP TLKDD + W+ ++EA
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEA

KAA0066251.1 uncharacterized protein E6C27_scaffold21G002810 [Cucumis melo var. makuwa]2.1e-0552.08Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE
        +DPH +I SFYSI   FHM G+ +++  F LFP T+ D+AKRW  SL+
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.2e-0652.08Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE
        EDPH H+KSF  ICS F M+G+ Q+    TLFP +L+D+A++W  S E
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE

XP_038896560.1 uncharacterized protein LOC120084813 [Benincasa hispida]5.4e-0650.98Show/hide
Query:  MSDEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE
        +  EDPH H+ SF  ICS F + G+T E+    LFP TL+D+A+RW  SLE
Subjt:  MSDEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE

TrEMBL top hitse value%identityAlignment
A0A392QF53 Retrotrans_gag domain-containing protein (Fragment)6.4e-0550Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE
        EDPH H++ F  + S F + G+TQE F   LFP +L+D AK W+ SLE
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE

A0A392QG70 Retrotrans_gag domain-containing protein (Fragment)6.4e-0550Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE
        EDPH H++ F  + S F + G+TQE F   LFP +L+D AK W+ SLE
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE

A0A5A7TNS8 Uncharacterized protein5.6e-0956.6Show/hide
Query:  DEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEAIRS
        DEDP DHIKS Y +CS FH+  ++QE    T F  TLKDD K+WVG+LE  R+
Subjt:  DEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEAIRS

A0A5A7TRN6 Retrotrans_gag domain-containing protein4.5e-0655.1Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEA
        ED + +IKSFYSI S FH+S +TQ +   TLFP TLKDD + W+ ++EA
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEA

A0A5D3BCV5 Uncharacterized protein9.9e-0652.08Show/hide
Query:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE
        +DPH +I SFYSI   FHM G+ +++  F LFP T+ D+AKRW  SL+
Subjt:  EDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGATGTCGGACGAAGATCCACATGATCACATCAAGAGTTTCTACTCTATATGTTCCTTGTTCCACATGTCTGGCATGACGCAAGAAAAGTTTCCCTTTACTCT
CTTCCCACTGACATTAAAGGATGACGCGAAGAGATGGGTTGGCTCGCTTGAGGCGATTCGTTCACGCAACAAAATAGTTGGAGGAAATAGGATGTGTGGGATGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGATGTCGGACGAAGATCCACATGATCACATCAAGAGTTTCTACTCTATATGTTCCTTGTTCCACATGTCTGGCATGACGCAAGAAAAGTTTCCCTTTACTCT
CTTCCCACTGACATTAAAGGATGACGCGAAGAGATGGGTTGGCTCGCTTGAGGCGATTCGTTCACGCAACAAAATAGTTGGAGGAAATAGGATGTGTGGGATGCGGTGA
Protein sequenceShow/hide protein sequence
MLQMSDEDPHDHIKSFYSICSLFHMSGMTQEKFPFTLFPLTLKDDAKRWVGSLEAIRSRNKIVGGNRMCGMR