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PI0015374 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015374
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:6614475..6614892
RNA-Seq ExpressionPI0015374
SyntenyPI0015374
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-2458.42Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASSS
        KE+F+NWVKSHP AKG LNKS P+YDELSYVF KDRA G R E+F D+  N P G++PFA D   + D   MYSQG  +SPD+++G    + SEGR  SS
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASSS

Query:  G
        G
Subjt:  G

KAA0035563.1 retrotransposon protein [Cucumis melo var. makuwa]5.9e-2563.73Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS
        KELF+NWV+SHPAAKG LNKS PYYDEL+YVF  DRA G+  ETF DV SN P GG+  F   DG N D S +YSQG  IS DD+  S P R+SEGR  S
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS

Query:  SG
        SG
Subjt:  SG

KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-2462.75Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS
        KELF+NWV+SHPAAKG LNK  PYYDEL+YVF +DRA G+  ETF DV SN P GG+  F   DG N D S +YSQG  IS DD+  S P R+SEGR  S
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS

Query:  SG
        SG
Subjt:  SG

KAA0054520.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]5.3e-2662.11Show/hide
Query:  ELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGR
        ELF+NWVKSH A KGFLNK   YY++LSY+F KDR MG  +ETFVDV SNV GG++ F+ +DG NM I  MYSQG  + P DI+G+ P  SSEGR
Subjt:  ELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGR

KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-2462.75Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS
        KELF+NWV+SHPAAKG LNKS PYYDEL+YVF +DRA G+  ETF DV SN P GG+  F   DG N D   +YSQG  IS DD+  S P R+SEGR  S
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS

Query:  SG
        SG
Subjt:  SG

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein6.3e-2558.42Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASSS
        KE+F+NWVKSHP AKG LNKS P+YDELSYVF KDRA G R E+F D+  N P G++PFA D   + D   MYSQG  +SPD+++G    + SEGR  SS
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASSS

Query:  G
        G
Subjt:  G

A0A5A7SYB2 Retrotransposon protein2.8e-2563.73Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS
        KELF+NWV+SHPAAKG LNKS PYYDEL+YVF  DRA G+  ETF DV SN P GG+  F   DG N D S +YSQG  IS DD+  S P R+SEGR  S
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS

Query:  SG
        SG
Subjt:  SG

A0A5A7TC56 Retrotransposon protein6.3e-2562.75Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS
        KELF+NWV+SHPAAKG LNK  PYYDEL+YVF +DRA G+  ETF DV SN P GG+  F   DG N D S +YSQG  IS DD+  S P R+SEGR  S
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS

Query:  SG
        SG
Subjt:  SG

A0A5A7UGY0 RING-H2 finger protein ATL662.6e-2662.11Show/hide
Query:  ELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGR
        ELF+NWVKSH A KGFLNK   YY++LSY+F KDR MG  +ETFVDV SNV GG++ F+ +DG NM I  MYSQG  + P DI+G+ P  SSEGR
Subjt:  ELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGR

A0A5A7V6Q9 Retrotransposon protein6.3e-2562.75Show/hide
Query:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS
        KELF+NWV+SHPAAKG LNKS PYYDEL+YVF +DRA G+  ETF DV SN P GG+  F   DG N D   +YSQG  IS DD+  S P R+SEGR  S
Subjt:  KELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVP-GGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASS

Query:  SG
        SG
Subjt:  SG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAATTGCTGGAAGGAGCTTTTTGAGAATTGGGTGAAGAGTCACCCCGCAGCAAAGGGTTTTTTGAACAAGTCAGTTCCATACTACGACGAATTGTCCTATGTCTT
CAGGAAAGACCGCGCGATGGGACAACGCGTGGAGACATTCGTAGATGTCAGTTCCAATGTGCCAGGTGGTTTCAAGCCATTTGCAGGTGACGATGGACAAAATATGGACA
TCTCATGCATGTACAGCCAGGGACGTCCCATATCACCTGATGACATAGTGGGATCACATCCTGAACGGTCGAGTGAGGGTAGGGCGAGTTCGAGCGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAATTGCTGGAAGGAGCTTTTTGAGAATTGGGTGAAGAGTCACCCCGCAGCAAAGGGTTTTTTGAACAAGTCAGTTCCATACTACGACGAATTGTCCTATGTCTT
CAGGAAAGACCGCGCGATGGGACAACGCGTGGAGACATTCGTAGATGTCAGTTCCAATGTGCCAGGTGGTTTCAAGCCATTTGCAGGTGACGATGGACAAAATATGGACA
TCTCATGCATGTACAGCCAGGGACGTCCCATATCACCTGATGACATAGTGGGATCACATCCTGAACGGTCGAGTGAGGGTAGGGCGAGTTCGAGCGGATAA
Protein sequenceShow/hide protein sequence
MHNCWKELFENWVKSHPAAKGFLNKSVPYYDELSYVFRKDRAMGQRVETFVDVSSNVPGGFKPFAGDDGQNMDISCMYSQGRPISPDDIVGSHPERSSEGRASSSG