; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015423 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015423
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr03:16216057..16216293
RNA-Seq ExpressionPI0015423
SyntenyPI0015423
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]2.9e-2174.67Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK
        +SGK K ESLDLQTKGE KT+ SIEEPP+L+LKPLPNH+KYAYLRENDT+ V I A+L+  EE  LLNMLKRHKK
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]1.1e-2071.43Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI
        +S ++K ESLDLQ KGEKKTKPSIEEPPEL+LK LPNH+KY YLRENDT+ V I  +L+ A+E  LLNMLKRHKK I
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI

KAA0059789.1 uncharacterized protein E6C27_scaffold108G00540 [Cucumis melo var. makuwa]1.2e-1972Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK
        MSG++K E LDLQTK EKKTKPSIEEPPEL+LKPLPNH+KYAYL ENDT+ V IFA L+  +E  LL +LKR KK
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]2.7e-1970.27Show/hide
Query:  KRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI
        ++K E+LDL+TKGEKKTKPSIEEP EL+LKPL NH+KYAYLRENDT+ VII  +++  EE  LLNMLK HK AI
Subjt:  KRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI

TYJ96947.1 integrase [Cucumis melo var. makuwa]2.7e-1967.95Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAIG
        +SG++K ESLDLQTKGEKKTK SIEEPPEL+LKP  NH+KYAYL  NDT+++II  +L+  EE  LLN+LK HKKA G
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAIG

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein5.3e-2171.43Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI
        +S ++K ESLDLQ KGEKKTKPSIEEPPEL+LK LPNH+KY YLRENDT+ V I  +L+ A+E  LLNMLKRHKK I
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI

A0A5A7VE68 Uncharacterized protein1.3e-1970.27Show/hide
Query:  KRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI
        ++K E+LDL+TKGEKKTKPSIEEP EL+LKPL NH+KYAYLRENDT+ VII  +++  EE  LLNMLK HK AI
Subjt:  KRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAI

A0A5D3BCU9 Integrase1.3e-1967.95Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAIG
        +SG++K ESLDLQTKGEKKTK SIEEPPEL+LKP  NH+KYAYL  NDT+++II  +L+  EE  LLN+LK HKKA G
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAIG

A0A5D3BM57 Uncharacterized protein5.9e-2072Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK
        MSG++K E LDLQTK EKKTKPSIEEPPEL+LKPLPNH+KYAYL ENDT+ V IFA L+  +E  LL +LKR KK
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein1.4e-2174.67Show/hide
Query:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK
        +SGK K ESLDLQTKGE KT+ SIEEPP+L+LKPLPNH+KYAYLRENDT+ V I A+L+  EE  LLNMLKRHKK
Subjt:  MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCAAAAGGAAGTTAGAGTCTTTGGATCTGCAAACCAAAGGCGAGAAGAAGACAAAGCCATCAATTGAAGAACCACCAGAGTTAAAGCTAAAACCTTTACCCAA
CCACATGAAATATGCATATTTGAGGGAGAATGACACTATGGCCGTCATCATCTTCGCCTACTTGAACACCGCAGAAGAAAATACGTTATTGAATATGCTAAAACGCCATA
AGAAGGCAATAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCAAAAGGAAGTTAGAGTCTTTGGATCTGCAAACCAAAGGCGAGAAGAAGACAAAGCCATCAATTGAAGAACCACCAGAGTTAAAGCTAAAACCTTTACCCAA
CCACATGAAATATGCATATTTGAGGGAGAATGACACTATGGCCGTCATCATCTTCGCCTACTTGAACACCGCAGAAGAAAATACGTTATTGAATATGCTAAAACGCCATA
AGAAGGCAATAGGATAG
Protein sequenceShow/hide protein sequence
MSGKRKLESLDLQTKGEKKTKPSIEEPPELKLKPLPNHMKYAYLRENDTMAVIIFAYLNTAEENTLLNMLKRHKKAIG