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PI0015434 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015434
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:12718488..12720247
RNA-Seq ExpressionPI0015434
SyntenyPI0015434
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]1.3e-1782.26Show/hide
Query:  MPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ
        MPPP A  +VINHNDNQ EGDGSDGLDDDQVTLL E RR GH VVR +GRGRAYQNIQRRAQ
Subjt:  MPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ

KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]9.0e-4388.68Show/hide
Query:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQN
        M+NQNDEV+LREAQQGVIARMIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RGRGRAYQN
Subjt:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQN

Query:  IQRRAQ
        IQRRAQ
Subjt:  IQRRAQ

KAA0047036.1 uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]1.3e-2884.15Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ
        MEALTDRL+RLEIENRARERMPPPLA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RG G+AYQNIQRR Q
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ

TYK09709.1 uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]1.4e-3288.37Show/hide
Query:  MISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ
        MIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RGRGRAYQNIQRRAQ
Subjt:  MISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.1e-1652.48Show/hide
Query:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGRGRAYQNIQ
        + R REA +G + RMI SMEALT+R+ RLE +N+A  R+PPP    V+   ++++YEGDGSD  +DDQ T+L  PR     VG G+ RGRGRGR Y N Q
Subjt:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGRGRAYQNIQ

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A5A7T993 Retrotrans_gag domain-containing protein6.3e-1882.26Show/hide
Query:  MPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ
        MPPP A  +VINHNDNQ EGDGSDGLDDDQVTLL E RR GH VVR +GRGRAYQNIQRRAQ
Subjt:  MPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ

A0A5A7TK52 Retrotrans_gag domain-containing protein4.4e-4388.68Show/hide
Query:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQN
        M+NQNDEV+LREAQQGVIARMIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RGRGRAYQN
Subjt:  MDNQNDEVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQN

Query:  IQRRAQ
        IQRRAQ
Subjt:  IQRRAQ

A0A5A7TYI0 Uncharacterized protein6.1e-2984.15Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ
        MEALTDRL+RLEIENRARERMPPPLA  + INHN+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RG G+AYQNIQRR Q
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ

A0A5D3CHG3 Retrotrans_gag domain-containing protein7.0e-3388.37Show/hide
Query:  MISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ
        MIS+MEALTDRL+R EIENRARERMPPPLA  ++INHNDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RGRGRAYQNIQRRAQ
Subjt:  MISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241155.4e-1752.48Show/hide
Query:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGRGRAYQNIQ
        + R REA +G + RMI SMEALT+R+ RLE +N+A  R+PPP    V+   ++++YEGDGSD  +DDQ T+L  PR     VG G+ RGRGRGR Y N Q
Subjt:  EVRLREAQQGVIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGRGRAYQNIQ

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCATTGATAAGATGTTGAACAACAAAACAGAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTAAAAAGAAAAATGAAGCACATGCTGAACA
TTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGAGACAATCATTATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAGACTTCAAGATGGATTAAATGCTAAAT
TTTTAGCCTTTGATGACAAGTTGCAACAATTGGAATTTCAAGAGTCATTTGGACACCCAAAGATGGACAATCAAAATGATGAAGTACGATTAAGAGAGGCACAACAAGGA
GTTATTGCACGGATGATTAGTAGTATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTCTAGCACAAAATGT
GGTAATTAACCATAATGACAACCAATATGAGGGTGATGGATCTGATGGTTTAGACGATGACCAAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTTA
GAGGAAGAGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCATTGATAAGATGTTGAACAACAAAACAGAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTAAAAAGAAAAATGAAGCACATGCTGAACA
TTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGAGACAATCATTATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAGACTTCAAGATGGATTAAATGCTAAAT
TTTTAGCCTTTGATGACAAGTTGCAACAATTGGAATTTCAAGAGTCATTTGGACACCCAAAGATGGACAATCAAAATGATGAAGTACGATTAAGAGAGGCACAACAAGGA
GTTATTGCACGGATGATTAGTAGTATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTCTAGCACAAAATGT
GGTAATTAACCATAATGACAACCAATATGAGGGTGATGGATCTGATGGTTTAGACGATGACCAAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTTA
GAGGAAGAGGTCGTGGAAGAGCTTATCAAAACATCCAAAGGAGAGCTCAATAA
Protein sequenceShow/hide protein sequence
MLIDKMLNNKTEHEVENEAQQAHTNSSKKKNEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLNAKFLAFDDKLQQLEFQESFGHPKMDNQNDEVRLREAQQG
VIARMISSMEALTDRLDRLEIENRARERMPPPLAQNVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGRGRAYQNIQRRAQ