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PI0015443 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015443
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase, catalytic core
Genome locationchr02:5746961..5747194
RNA-Seq ExpressionPI0015443
SyntenyPI0015443
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.2e-2276.25Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNK
        M + RSNSNQVELD+VFYV EMKKNLV VSQ+TSA N +VFG NNVK     KV+GTPLMEGRRMD IYVMSAETTY+NK
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNK

KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.8e-2374.07Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        M + RSN NQVELD+VFYVP MKKNLV +SQ+TS GN VVFGPN+VK     KV+GTPL+EGRRMDFIYVMSAET Y+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

KAA0037956.1 glutamate receptor 2.8-like [Cucumis melo var. makuwa]5.4e-2066.67Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        M + RSNSNQVELD+VFYVP MKKNLVLVSQ+T  GN +VFG ++VK     KV+GTPLMEGRR++ IY++S ET Y+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.2e-2275.31Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        M + RSNSNQVELD+VFYV  MKKNLV VSQ+TSAGN VVFGP++VK     KV+GTPLMEGRRMD IYVMSAET Y+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

TYK22269.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.0e-2376.54Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        MT+ R NSNQVELD+VFYV EMKKNLV VSQ+TSA N +VFG NNVK     KV+GTPLMEGRRMD IYVMSAETTY+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

TrEMBL top hitse value%identityAlignment
A0A5A7ST06 Integrase, catalytic core5.6e-2376.25Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNK
        M + RSNSNQVELD+VFYV EMKKNLV VSQ+TSA N +VFG NNVK     KV+GTPLMEGRRMD IYVMSAETTY+NK
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNK

A0A5A7T2J1 Integrase, catalytic core8.6e-2474.07Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        M + RSN NQVELD+VFYVP MKKNLV +SQ+TS GN VVFGPN+VK     KV+GTPL+EGRRMDFIYVMSAET Y+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

A0A5A7T6Z1 Glutamate receptor 2.8-like2.6e-2066.67Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        M + RSNSNQVELD+VFYVP MKKNLVLVSQ+T  GN +VFG ++VK     KV+GTPLMEGRR++ IY++S ET Y+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

A0A5A7TYD2 Integrase, catalytic core5.6e-2375.31Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        M + RSNSNQVELD+VFYV  MKKNLV VSQ+TSAGN VVFGP++VK     KV+GTPLMEGRRMD IYVMSAET Y+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

A0A5D3DG87 Integrase, catalytic core1.5e-2376.54Show/hide
Query:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT
        MT+ R NSNQVELD+VFYV EMKKNLV VSQ+TSA N +VFG NNVK     KV+GTPLMEGRRMD IYVMSAETTY+NKT
Subjt:  MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKA----KVNGTPLMEGRRMDFIYVMSAETTYMNKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGTCTCGCTCAAATTCCAATCAAGTGGAATTGGATAGTGTATTTTATGTGCCTGAAATGAAGAAGAATTTAGTGTTAGTATCTCAAATGACATCAGCAGGCAA
TCTCGTCGTGTTTGGACCTAACAATGTCAAGGCCAAAGTCAATGGTACACCTTTGATGGAAGGACGAAGGATGGACTTCATCTACGTTATGTCAGCAGAGACTACCTACA
TGAACAAGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAATGTCTCGCTCAAATTCCAATCAAGTGGAATTGGATAGTGTATTTTATGTGCCTGAAATGAAGAAGAATTTAGTGTTAGTATCTCAAATGACATCAGCAGGCAA
TCTCGTCGTGTTTGGACCTAACAATGTCAAGGCCAAAGTCAATGGTACACCTTTGATGGAAGGACGAAGGATGGACTTCATCTACGTTATGTCAGCAGAGACTACCTACA
TGAACAAGACATGA
Protein sequenceShow/hide protein sequence
MTMSRSNSNQVELDSVFYVPEMKKNLVLVSQMTSAGNLVVFGPNNVKAKVNGTPLMEGRRMDFIYVMSAETTYMNKT