; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015445 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015445
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLOB domain-containing protein
Genome locationchr04:19829003..19830482
RNA-Seq ExpressionPI0015445
SyntenyPI0015445
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650674.1 hypothetical protein Csa_009642 [Cucumis sativus]4.5e-7068.75Show/hide
Query:  SSSSSTSTNTSVSGG----GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
        +SSSSTSTNTS+SGG    GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
Subjt:  SSSSSTSTNTSVSGG----GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP

Query:  VM-VVLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQ
        V   V  IF L                                    FNN                        SSLESAANNDEALLFINQNQL HESQ
Subjt:  VM-VVLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQ

Query:  LSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        LSRSSQ+PQFLQPFPRKKLPSSSH DLGELHALALRMMRN
Subjt:  LSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

XP_004152037.2 LOB domain-containing protein 16 [Cucumis sativus]4.5e-7068.75Show/hide
Query:  SSSSSTSTNTSVSGG----GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
        +SSSSTSTNTS+SGG    GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
Subjt:  SSSSSTSTNTSVSGG----GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP

Query:  VM-VVLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQ
        V   V  IF L                                    FNN                        SSLESAANNDEALLFINQNQL HESQ
Subjt:  VM-VVLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQ

Query:  LSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        LSRSSQ+PQFLQPFPRKKLPSSSH DLGELHALALRMMRN
Subjt:  LSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

XP_008461877.1 PREDICTED: LOB domain-containing protein 16 [Cucumis melo]4.6e-6768.22Show/hide
Query:  SSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM-V
        +SSSSTSTNTSVSG G  GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV   
Subjt:  SSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM-V

Query:  VLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQLSRS
        V  IF L                                    FNN                        SSLESAANNDEALLFINQNQL HESQLSRS
Subjt:  VLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQLSRS

Query:  SQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        SQ+PQ LQPFPRKKL SSSH DLGELHALALRMMRN
Subjt:  SQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

XP_022967414.1 LOB domain-containing protein 16-like [Cucurbita maxima]1.6e-4354.55Show/hide
Query:  MASSSSSTST-NTSVS-----GGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQAR
        MASSSSS+ST N+SVS     GGG GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQAR
Subjt:  MASSSSSTST-NTSVS-----GGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQAR

Query:  IHDPVM-VVLLIFLL------------------------------------FNN----------------------SSLESAANNDEALLFINQNQLCHE
        I DPV   V  IF L                                    FNN                      SS+ESAANND AL+F+N  Q   E
Subjt:  IHDPVM-VVLLIFLL------------------------------------FNN----------------------SSLESAANNDEALLFINQNQLCHE

Query:  SQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        SQ                ++  +S H DLGEL ALALRMMRN
Subjt:  SQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

XP_038888851.1 LOB domain-containing protein 16-like [Benincasa hispida]3.7e-5660.74Show/hide
Query:  MASSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM
        MASSSSS+ +      GG GG GGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV 
Subjt:  MASSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM

Query:  -VVLLIFLL------------------------------------FNN----------------------------SSLESAANNDEALLFINQNQLCHE
          V  IF L                                    FNN                            SSLESAANNDEALLFINQ    HE
Subjt:  -VVLLIFLL------------------------------------FNN----------------------------SSLESAANNDEALLFINQNQLCHE

Query:  SQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        SQ SRS ++ QFLQPFP KKLPSS   DLGEL ALALRMMRN
Subjt:  SQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

TrEMBL top hitse value%identityAlignment
A0A0A0LAE8 LOB domain-containing protein2.2e-7068.75Show/hide
Query:  SSSSSTSTNTSVSGG----GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
        +SSSSTSTNTS+SGG    GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
Subjt:  SSSSSTSTNTSVSGG----GSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP

Query:  VM-VVLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQ
        V   V  IF L                                    FNN                        SSLESAANNDEALLFINQNQL HESQ
Subjt:  VM-VVLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQ

Query:  LSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        LSRSSQ+PQFLQPFPRKKLPSSSH DLGELHALALRMMRN
Subjt:  LSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

A0A1S3CG76 LOB domain-containing protein 162.2e-6768.22Show/hide
Query:  SSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM-V
        +SSSSTSTNTSVSG G  GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV   
Subjt:  SSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM-V

Query:  VLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQLSRS
        V  IF L                                    FNN                        SSLESAANNDEALLFINQNQL HESQLSRS
Subjt:  VLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQLSRS

Query:  SQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        SQ+PQ LQPFPRKKL SSSH DLGELHALALRMMRN
Subjt:  SQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

A0A5D3C536 LOB domain-containing protein 162.2e-6768.22Show/hide
Query:  SSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM-V
        +SSSSTSTNTSVSG G  GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV   
Subjt:  SSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVM-V

Query:  VLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQLSRS
        V  IF L                                    FNN                        SSLESAANNDEALLFINQNQL HESQLSRS
Subjt:  VLLIFLL------------------------------------FNN------------------------SSLESAANNDEALLFINQNQLCHESQLSRS

Query:  SQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        SQ+PQ LQPFPRKKL SSSH DLGELHALALRMMRN
Subjt:  SQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

A0A6J1HIG3 LOB domain-containing protein 16-like6.6e-4354.62Show/hide
Query:  MASSSSSTST-NTSVS-GGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP
        MASSSSS+ST N+SVS GGG GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA+HKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARI DP
Subjt:  MASSSSSTST-NTSVS-GGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDP

Query:  VM-VVLLIFLL------------------------------------FNN----------------------SSLESAANNDEALLFINQNQLCHESQLS
        V   V  IF L                                    FNN                      SS+ESAANND AL+F+N  Q   ESQ  
Subjt:  VM-VVLLIFLL------------------------------------FNN----------------------SSLESAANNDEALLFINQNQLCHESQLS

Query:  RSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
                      ++  +S H DLGEL ALALRMMRN
Subjt:  RSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

A0A6J1HWM7 LOB domain-containing protein 16-like7.8e-4454.55Show/hide
Query:  MASSSSSTST-NTSVS-----GGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQAR
        MASSSSS+ST N+SVS     GGG GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQAR
Subjt:  MASSSSSTST-NTSVS-----GGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQAR

Query:  IHDPVM-VVLLIFLL------------------------------------FNN----------------------SSLESAANNDEALLFINQNQLCHE
        I DPV   V  IF L                                    FNN                      SS+ESAANND AL+F+N  Q   E
Subjt:  IHDPVM-VVLLIFLL------------------------------------FNN----------------------SSLESAANNDEALLFINQNQLCHE

Query:  SQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN
        SQ                ++  +S H DLGEL ALALRMMRN
Subjt:  SQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN

SwissProt top hitse value%identityAlignment
O22131 LOB domain-containing protein 182.7e-3379.55Show/hide
Query:  TSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        +S  GG SGGGGG PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+
Subjt:  TSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

O81323 LOB domain-containing protein 301.4e-2973.03Show/hide
Query:  NTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        ++S +   S GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVSKLL HVP H R +AVV+I +EAQAR+ DP+
Subjt:  NTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

Q5UG13 LOB domain-containing protein CRL14.7e-3079.49Show/hide
Query:  GGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        G GSPCGACKFLRRKCV  C+FAPYFC EQGAA FAAIHKVFGASNVSKLL H+P+ DR EA VTI+YEAQAR+ DP+
Subjt:  GGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

Q9M2J7 LOB domain-containing protein 296.1e-3072.84Show/hide
Query:  SGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        S    GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P+ DRCEA +TI+YEAQAR+ DP+
Subjt:  SGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

Q9SLB7 LOB domain-containing protein 163.4e-3687.06Show/hide
Query:  SGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        SG G+  G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+VP+HDRCEAVVTIAYEAQAR+HDPV
Subjt:  SGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

Arabidopsis top hitse value%identityAlignment
AT2G31310.1 LOB domain-containing protein 141.7e-3072.15Show/hide
Query:  GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        GG GSPCG CKFLRRKCV  C+FAPYFC E+G++ FAAIHKVFGASN SKL+ H+P HDRC+AV TI+YEA +R+HDP+
Subjt:  GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

AT2G42430.1 lateral organ boundaries-domain 162.4e-3787.06Show/hide
Query:  SGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        SG G+  G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+VP+HDRCEAVVTIAYEAQAR+HDPV
Subjt:  SGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

AT2G45420.1 LOB domain-containing protein 181.9e-3479.55Show/hide
Query:  TSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        +S  GG SGGGGG PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+
Subjt:  TSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

AT3G58190.1 lateral organ boundaries-domain 294.4e-3172.84Show/hide
Query:  SGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        S    GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P+ DRCEA +TI+YEAQAR+ DP+
Subjt:  SGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV

AT4G00220.1 Lateral organ boundaries (LOB) domain family protein9.7e-3173.03Show/hide
Query:  NTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV
        ++S +   S GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVSKLL HVP H R +AVV+I +EAQAR+ DP+
Subjt:  NTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTTCTTCTACATCCACGAACACGAGCGTGTCGGGGGGTGGCAGTGGCGGTGGTGGTGGTTCGCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATG
TGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGAGCAAGTAATGTTTCAAAGTTGTTGCTTC
ATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCATGATCCTGTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAAC
AACAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATGTCATGAGAGCCAATTAAGCAGATCATCACAAGACCCTCAATT
TCTTCAACCATTTCCTAGAAAAAAATTACCTTCTTCTTCTCATACTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCTTCTTCTACATCCACGAACACGAGCGTGTCGGGGGGTGGCAGTGGCGGTGGTGGTGGTTCGCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATG
TGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGAGCAAGTAATGTTTCAAAGTTGTTGCTTC
ATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCATGATCCTGTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAAC
AACAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATGTCATGAGAGCCAATTAAGCAGATCATCACAAGACCCTCAATT
TCTTCAACCATTTCCTAGAAAAAAATTACCTTCTTCTTCTCATACTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAACTAA
Protein sequenceShow/hide protein sequence
MASSSSSTSTNTSVSGGGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVMVVLLIFLLFN
NSSLESAANNDEALLFINQNQLCHESQLSRSSQDPQFLQPFPRKKLPSSSHTDLGELHALALRMMRN