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PI0015449 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015449
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2
Genome locationchr10:3208252..3209721
RNA-Seq ExpressionPI0015449
SyntenyPI0015449
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AKF18519.1 PSI P700 apoprotein A2, partial [Biddulphia biddulphiana]6.0e-0443.02Show/hide
Query:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
        LS P N    A N I  P +   I+ S  DL       DF     +A+               A GSKLMPDKKDFGYSFPCDGPG
Subjt:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
THU42189.1 hypothetical protein C4D60_Mb00t17400 [Musa balbisiana]3.5e-0480.65Show/hide
Query:  LHQNGAL---GSKLMPDKKDFGYSFPCDGPG
        +  NGAL   GSKLMPDKKDFGYSFPCDGPG
Subjt:  LHQNGAL---GSKLMPDKKDFGYSFPCDGPG
YP_009497293.1 photosystem I P700 apoprotein A2 [Biddulphia biddulphiana]6.0e-0443.02Show/hide
Query:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
        LS P N    A N I  P +   I+ S  DL       DF     +A+               A GSKLMPDKKDFGYSFPCDGPG
Subjt:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
TrEMBL top hitse value%identityAlignment
A0A0F6WHE0 Photosystem I (Fragment)2.9e-0443.02Show/hide
Query:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
        LS P N    A N I  P +   I+ S  DL       DF     +A+               A GSKLMPDKKDFGYSFPCDGPG
Subjt:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
A0A251VF88 Photosystem I2.9e-0444.62Show/hide
Query:  WFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
        W    S+R L  +A+       +L+ V  +   R          GSKLMPDKKDFGYSFPCDGPG
Subjt:  WFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
A0A2U9NSZ3 Photosystem I P700 chlorophyll a apoprotein A22.9e-0443.02Show/hide
Query:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
        LS P N    A N I  P +   I+ S  DL       DF     +A+               A GSKLMPDKKDFGYSFPCDGPG
Subjt:  LSQPLNQC--AKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDGPG
A0A4S8I3R2 Uncharacterized protein1.7e-0480.65Show/hide
Query:  LHQNGAL---GSKLMPDKKDFGYSFPCDGPG
        +  NGAL   GSKLMPDKKDFGYSFPCDGPG
Subjt:  LHQNGAL---GSKLMPDKKDFGYSFPCDGPG
A0A4Y7LAD9 Uncharacterized protein8.5e-0495.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG
SwissProt top hitse value%identityAlignment
A1EA07 Photosystem I P700 chlorophyll a apoprotein A23.0e-0695.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG
A4QJB4 Photosystem I P700 chlorophyll a apoprotein A23.0e-0695.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG
A4QJJ8 Photosystem I P700 chlorophyll a apoprotein A23.0e-0695.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG
Q33332 Photosystem I P700 chlorophyll a apoprotein A23.0e-0695.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG
Q3V535 Photosystem I P700 chlorophyll a apoprotein A23.0e-0695.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG
Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein2.1e-0795.65Show/hide
Query:  ALGSKLMPDKKDFGYSFPCDGPG
        A GSKLMPDKKDFGYSFPCDGPG
Subjt:  ALGSKLMPDKKDFGYSFPCDGPG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATCCTTGCTCGGGGTACAACTGAGACGGGTCTCGAGGAGAAACTTCAATGGAGCGCTAGAACGAAAAGAGACTGAGTTGAGTCAGCCCCTAAACCAATGTGC
CAAAAATCCCATAAGTTATCCATTCTTTCGATGGTTTATAAGCCAAAGTTTCAGAGATTTAGGGTTTTACGCCGTGAAGGAAGATTTTGAAAGAGTTTCTCTAGTAGCTG
TCACTTCTTCCTTCCGCCGTCGTTTCCGATCACTTCATCAAAATGGTGCTTTAGGTTCCAAATTAATGCCGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGCGACGGT
CCGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAATCCTTGCTCGGGGTACAACTGAGACGGGTCTCGAGGAGAAACTTCAATGGAGCGCTAGAACGAAAAGAGACTGAGTTGAGTCAGCCCCTAAACCAATGTGC
CAAAAATCCCATAAGTTATCCATTCTTTCGATGGTTTATAAGCCAAAGTTTCAGAGATTTAGGGTTTTACGCCGTGAAGGAAGATTTTGAAAGAGTTTCTCTAGTAGCTG
TCACTTCTTCCTTCCGCCGTCGTTTCCGATCACTTCATCAAAATGGTGCTTTAGGTTCCAAATTAATGCCGGATAAAAAGGATTTTGGTTATAGTTTTCCTTGCGACGGT
CCGGGATGA
Protein sequenceShow/hide protein sequence
MDESLLGVQLRRVSRRNFNGALERKETELSQPLNQCAKNPISYPFFRWFISQSFRDLGFYAVKEDFERVSLVAVTSSFRRRFRSLHQNGALGSKLMPDKKDFGYSFPCDG
PG