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PI0015463 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015463
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:17572529..17573058
RNA-Seq ExpressionPI0015463
SyntenyPI0015463
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-3761.72Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        MCGPTCS F WNDE KCI+ EKE+F+NWVKSH T  GLL KSFP+YDELSYVFGKDRA G RAE+FAD+GLN   G+E F  +   D +   MYSQG  M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKRE
        SP++++G R  Q S  R  SS SK+KR+
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKRE

KAA0060332.1 retrotransposon protein [Cucumis melo var. makuwa]8.5e-3558.91Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        M GP CSGF WNDE KCII+EKELF+NWV+SH     LL K FPYYDEL+YVF +DRA G  A+TFAD+G N  GG+E F   DG + E P +YSQG  M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKREA
        S +D+  +RP ++S  RT SS SK+KRE+
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKREA

KAA0062588.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3458.59Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLN-VSGGFEEFPAEDGKDIEIPNMYSQGCP
        M GP CSGF WNDE KCI+ EKELF+NWV+SH    GLL K FPYYDEL+YVFG+DRA G  AETFAD+G N   GG++ F   DG + + P++YSQG  
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLN-VSGGFEEFPAEDGKDIEIPNMYSQGCP

Query:  MSPEDILGTRPDQSSVCRTSSSRSKKKR
        +S +D+  +RP ++S  RT SSRSK+KR
Subjt:  MSPEDILGTRPDQSSVCRTSSSRSKKKR

XP_031739703.1 uncharacterized protein LOC116403241 [Cucumis sativus]4.5e-3656.74Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        MCGP+CSGF WND+ KCI+ EKELF+NWV+SH  TNGLL K F YYDEL+Y+FGKDRA G  AETFAD+G NV  G EEFP  D  D++IP+M S    M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKREAIMWKLWKSFIAP
        S +DI   RP + +  RT+SS SK++R   + K   S   P
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKREAIMWKLWKSFIAP

XP_031744343.1 uncharacterized protein LOC116404989 [Cucumis sativus]7.7e-3661.42Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        M GP+C GF WND+VKCI+ EKELF+NWV+SH    GLL K FPYYDEL+YVFGKDRA GT AETFAD+G NV  GFEEFP  D  D+E P+M S    M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKR
        S +DI   RP + +  RT+SS SK++R
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKR

TrEMBL top hitse value%identityAlignment
A0A5A7SWU2 Retrotransposon protein1.2e-3460.16Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLN-VSGGFEEFPAEDGKDIEIPNMYSQGCP
        M GP CSGF WNDE KCII EKELF+NWV+SH    GLL K FPYYDEL+YVFG+DRA G  AETFADMG N   GG++ F   DGK+ + P MYSQ   
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLN-VSGGFEEFPAEDGKDIEIPNMYSQGCP

Query:  MSPEDILGTRPDQSSVCRTSSSRSKKKR
        +S +D+  +RP ++S  RT SS SK+KR
Subjt:  MSPEDILGTRPDQSSVCRTSSSRSKKKR

A0A5A7SXX8 Retrotransposon protein2.0e-3761.72Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        MCGPTCS F WNDE KCI+ EKE+F+NWVKSH T  GLL KSFP+YDELSYVFGKDRA G RAE+FAD+GLN   G+E F  +   D +   MYSQG  M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKRE
        SP++++G R  Q S  R  SS SK+KR+
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKRE

A0A5A7UWV7 Retrotransposon protein4.1e-3558.91Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        M GP CSGF WNDE KCII+EKELF+NWV+SH     LL K FPYYDEL+YVF +DRA G  A+TFAD+G N  GG+E F   DG + E P +YSQG  M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKREA
        S +D+  +RP ++S  RT SS SK+KRE+
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKREA

A0A5A7V4T0 Retrotransposon protein5.4e-3558.59Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLN-VSGGFEEFPAEDGKDIEIPNMYSQGCP
        M GP CSGF WNDE KCI+ EKELF+NWV+SH    GLL K FPYYDEL+YVFG+DRA G  AETFAD+G N   GG++ F   DG + + P++YSQG  
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLN-VSGGFEEFPAEDGKDIEIPNMYSQGCP

Query:  MSPEDILGTRPDQSSVCRTSSSRSKKKR
        +S +D+  +RP ++S  RT SSRSK+KR
Subjt:  MSPEDILGTRPDQSSVCRTSSSRSKKKR

A0A5D3BSM9 Retrotransposon protein7.0e-3559.06Show/hide
Query:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM
        M GPTCSGF WNDE KCI++EK+ F +WVKSH  T GLL K FP+YDELSYVFGKDRA G + ETFAD+GLN    +E F A    D++   MYSQG  M
Subjt:  MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPM

Query:  SPEDILGTRPDQSSVCRTSSSRSKKKR
        SP++++GTR  + S  R  SS SK+KR
Subjt:  SPEDILGTRPDQSSVCRTSSSRSKKKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGGCCCTACATGTAGTGGCTTTTGTTGGAACGATGAGGTGAAATGCATAATTGTCGAGAAGGAATTGTTCGAGAATTGGGTGAAGAGTCATTCGACAACAAATGG
CCTTTTGATTAAGTCGTTTCCCTACTACGACGAACTATCCTATGTCTTTGGAAAAGATCGCGCTAAAGGAACACGTGCAGAGACATTCGCCGATATGGGTTTGAATGTGT
CAGGCGGTTTTGAGGAATTTCCAGCTGAAGATGGAAAGGATATAGAGATCCCAAACATGTATAGCCAGGGATGTCCAATGTCACCCGAAGACATACTAGGAACACGACCT
GATCAGTCGAGTGTGTGTAGGACGAGTTCGAGCAGATCAAAGAAGAAGCGGGAGGCCATAATGTGGAAACTGTGGAAATCATTCATAGCGCCATGGAATATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGGCCCTACATGTAGTGGCTTTTGTTGGAACGATGAGGTGAAATGCATAATTGTCGAGAAGGAATTGTTCGAGAATTGGGTGAAGAGTCATTCGACAACAAATGG
CCTTTTGATTAAGTCGTTTCCCTACTACGACGAACTATCCTATGTCTTTGGAAAAGATCGCGCTAAAGGAACACGTGCAGAGACATTCGCCGATATGGGTTTGAATGTGT
CAGGCGGTTTTGAGGAATTTCCAGCTGAAGATGGAAAGGATATAGAGATCCCAAACATGTATAGCCAGGGATGTCCAATGTCACCCGAAGACATACTAGGAACACGACCT
GATCAGTCGAGTGTGTGTAGGACGAGTTCGAGCAGATCAAAGAAGAAGCGGGAGGCCATAATGTGGAAACTGTGGAAATCATTCATAGCGCCATGGAATATGTAA
Protein sequenceShow/hide protein sequence
MCGPTCSGFCWNDEVKCIIVEKELFENWVKSHSTTNGLLIKSFPYYDELSYVFGKDRAKGTRAETFADMGLNVSGGFEEFPAEDGKDIEIPNMYSQGCPMSPEDILGTRP
DQSSVCRTSSSRSKKKREAIMWKLWKSFIAPWNM