; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015475 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015475
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:13379735..13381089
RNA-Seq ExpressionPI0015475
SyntenyPI0015475
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]2.4e-2845.34Show/hide
Query:  LRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFF
        +R  VV  FY A +N+EE   E+  + V+F  KAINALY L N+    GH    NP  +  ++ALE+I+WP   W   PT KYQL+P+ L T+VSVWL F
Subjt:  LRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFF

Query:  IKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL
        IKK I PTRHDSTI++E  MLLY      + N  ++    +++W + P GA PF    K L
Subjt:  IKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL

KAA0047856.1 hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]5.1e-2633.46Show/hide
Query:  LERKEDKKKMFTDLSEQVEELPAKYKALEPERYLEVIAKELEDELEAMSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINS----
        ++R ++KKK+  +  ++VEE   + K    ER  + + +E E E E M  +E+    ++Q +  R ++    I ++  E   +  KAK KT  + S    
Subjt:  LERKEDKKKMFTDLSEQVEELPAKYKALEPERYLEVIAKELEDELEAMSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINS----

Query:  -LIKGHTKLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTT
          +     +R  +V  FY   +N EE   E+ G+ +NF    IN +Y L N+    GH    NP  +  +EALE   W    W   PT  YQL+PH LTT
Subjt:  -LIKGHTKLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTT

Query:  KVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL
        + SVWL FIKK I PT HD+ I++E  MLLY I+ +  VN+ ++I   + +  + P+ A  F   +K L
Subjt:  KVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL

KAA0049609.1 transposase [Cucumis melo var. makuwa]2.0e-3043.39Show/hide
Query:  HPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLSNDV-EMPGHEYVVNPTTKMAREALEDIVWPRAA
        HP   K K  T     + KG     +G  E     K+    E +++ +    V F  + IN LYDL ND+   PG   +V+     A++ ++ IVWP A 
Subjt:  HPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLSNDV-EMPGHEYVVNPTTKMAREALEDIVWPRAA

Query:  WKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM
           TPT + QL+PHQLT + +VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NL  ++  + +SW R+PK A PFP+TVK LC+
Subjt:  WKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-3648.48Show/hide
Query:  KLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTG-KYQLYPHQLTTKVSVWL
        K+RM VV KFY  K N  +  + I      FNV+ IN LY+  ND E  G E V   T  +A+EAL+ + WP    +V P   +YQLYPH LTTK +VW+
Subjt:  KLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTG-KYQLYPHQLTTKVSVWL

Query:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM
        FF K KIFPT +DSTI+++  ++LYCIM KK +NLD++I  +I++W   PK AMPFPS ++ LC+
Subjt:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.8e-2938.74Show/hide
Query:  MSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLS
        M+ +EQG     Q  +A   + K +IR   P+              +    +G  +  +G  E     K+    E +++ +    V F  + IN LYDL 
Subjt:  MSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLS

Query:  NDV-EMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSI
        ND+   PG   +V+     A++ ++ IVWP A    TPT + QL+PHQLT + +VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NL  ++  + 
Subjt:  NDV-EMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSI

Query:  MSWTRSPKGAMPFPSTVKALCM
        +SW R+PK A PFP+TVK LC+
Subjt:  MSWTRSPKGAMPFPSTVKALCM

TrEMBL top hitse value%identityAlignment
A0A5A7U0U4 Uncharacterized protein2.5e-2633.46Show/hide
Query:  LERKEDKKKMFTDLSEQVEELPAKYKALEPERYLEVIAKELEDELEAMSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINS----
        ++R ++KKK+  +  ++VEE   + K    ER  + + +E E E E M  +E+    ++Q +  R ++    I ++  E   +  KAK KT  + S    
Subjt:  LERKEDKKKMFTDLSEQVEELPAKYKALEPERYLEVIAKELEDELEAMSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINS----

Query:  -LIKGHTKLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTT
          +     +R  +V  FY   +N EE   E+ G+ +NF    IN +Y L N+    GH    NP  +  +EALE   W    W   PT  YQL+PH LTT
Subjt:  -LIKGHTKLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTT

Query:  KVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL
        + SVWL FIKK I PT HD+ I++E  MLLY I+ +  VN+ ++I   + +  + P+ A  F   +K L
Subjt:  KVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL

A0A5A7U806 Transposase9.6e-3143.39Show/hide
Query:  HPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLSNDV-EMPGHEYVVNPTTKMAREALEDIVWPRAA
        HP   K K  T     + KG     +G  E     K+    E +++ +    V F  + IN LYDL ND+   PG   +V+     A++ ++ IVWP A 
Subjt:  HPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLSNDV-EMPGHEYVVNPTTKMAREALEDIVWPRAA

Query:  WKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM
           TPT + QL+PHQLT + +VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NL  ++  + +SW R+PK A PFP+TVK LC+
Subjt:  WKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM

A0A5A7V6M5 Gag/pol protein3.4e-3648.48Show/hide
Query:  KLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTG-KYQLYPHQLTTKVSVWL
        K+RM VV KFY  K N  +  + I      FNV+ IN LY+  ND E  G E V   T  +A+EAL+ + WP    +V P   +YQLYPH LTTK +VW+
Subjt:  KLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTG-KYQLYPHQLTTKVSVWL

Query:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM
        FF K KIFPT +DSTI+++  ++LYCIM KK +NLD++I  +I++W   PK AMPFPS ++ LC+
Subjt:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM

A0A5D3CVL7 Uncharacterized protein1.8e-2938.74Show/hide
Query:  MSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLS
        M+ +EQG     Q  +A   + K +IR   P+              +    +G  +  +G  E     K+    E +++ +    V F  + IN LYDL 
Subjt:  MSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINSLIKGHTKLRMGVVEKFYAAKL--NVEEFSVEISGRVVNFNVKAINALYDLS

Query:  NDV-EMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSI
        ND+   PG   +V+     A++ ++ IVWP A    TPT + QL+PHQLT + +VWLFFIKKKIFPT HDSTI  E A++LYCI  KK  NL  ++  + 
Subjt:  NDV-EMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSI

Query:  MSWTRSPKGAMPFPSTVKALCM
        +SW R+PK A PFP+TVK LC+
Subjt:  MSWTRSPKGAMPFPSTVKALCM

A0A5D3CW17 Uncharacterized protein1.2e-2845.34Show/hide
Query:  LRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFF
        +R  VV  FY A +N+EE   E+  + V+F  KAINALY L N+    GH    NP  +  ++ALE+I+WP   W   PT KYQL+P+ L T+VSVWL F
Subjt:  LRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFF

Query:  IKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL
        IKK I PTRHDSTI++E  MLLY      + N  ++    +++W + P GA PF    K L
Subjt:  IKKKIFPTRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGATCATCGAGCACTCATAATGATCGCATCCAAGTTCACTCCAATGGACCTGAGTCGGAGCAATCTGTATCGCGCAGTAGTGGCGAGCAAGAAACACCAAAATA
CACCCACCTGAAGCATGGCAAAGGGAAGATGTTACTAAAACCACCACCAGAAGTAGATGAACTGTGCGAAGAGTTGGAAGTTGACATGATAGACAAGGGGGTCATGATCA
CGTTCATCGCTAGACGACAAAGGAGGCGTAAAGAGGAACATCTGAGAAGAATAAGGGAAACACATCGAAGGAAGGACGAGCATGAGTGGATGAGATTTGAAGAGCGTCAC
AAAGAAAACAATAGAGGCGTTCAAATCTGCCTTGAAAGGAAGGAAGATAAGAAGAAAATGTTTACAGACTTGAGCGAACAAGTGGAGGAGCTGCCCGCGAAGTACAAGGC
TTTAGAGCCAGAGAGATACCTCGAGGTCATTGCTAAGGAACTCGAGGATGAGTTGGAGGCGATGAGCCCAATTGAGCAAGGGCCACTGCCTAGAAAGCAAAGCGAGGTCG
CCAGACCATCAAAAGGGAAAAAGAAAATTAGGGACTCTGGACCTGAAGAGCACCCAGTGGGCGGCAAAGCCAAAGTGAAAACACCCTCCATCAATTCACTCATAAAGGGG
CACACCAAGCTAAGGATGGGTGTGGTGGAAAAATTCTACGCCGCTAAGCTCAATGTTGAGGAGTTTAGCGTGGAAATCAGTGGAAGGGTGGTGAACTTCAATGTGAAGGC
CATTAACGCGCTATATGACTTGTCCAATGATGTTGAGATGCCTGGGCATGAATACGTGGTCAACCCAACCACGAAAATGGCCCGTGAAGCCTTAGAAGACATCGTCTGGC
CTAGAGCCGCATGGAAAGTTACGCCGACGGGGAAATATCAACTTTATCCACACCAGTTGACCACAAAAGTAAGTGTGTGGCTTTTCTTCATAAAAAAGAAGATATTTCCC
ACGCGCCATGACAGCACCATCAACTTAGAGTCAGCGATGCTGCTCTATTGCATAATGACGAAGAAGCGCGTAAACCTCGACGATCTAATAGCTACATCCATCATGTCCTG
GACGCGATCTCCCAAGGGTGCCATGCCCTTCCCATCAACAGTCAAAGCTCTTTGCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGATCATCGAGCACTCATAATGATCGCATCCAAGTTCACTCCAATGGACCTGAGTCGGAGCAATCTGTATCGCGCAGTAGTGGCGAGCAAGAAACACCAAAATA
CACCCACCTGAAGCATGGCAAAGGGAAGATGTTACTAAAACCACCACCAGAAGTAGATGAACTGTGCGAAGAGTTGGAAGTTGACATGATAGACAAGGGGGTCATGATCA
CGTTCATCGCTAGACGACAAAGGAGGCGTAAAGAGGAACATCTGAGAAGAATAAGGGAAACACATCGAAGGAAGGACGAGCATGAGTGGATGAGATTTGAAGAGCGTCAC
AAAGAAAACAATAGAGGCGTTCAAATCTGCCTTGAAAGGAAGGAAGATAAGAAGAAAATGTTTACAGACTTGAGCGAACAAGTGGAGGAGCTGCCCGCGAAGTACAAGGC
TTTAGAGCCAGAGAGATACCTCGAGGTCATTGCTAAGGAACTCGAGGATGAGTTGGAGGCGATGAGCCCAATTGAGCAAGGGCCACTGCCTAGAAAGCAAAGCGAGGTCG
CCAGACCATCAAAAGGGAAAAAGAAAATTAGGGACTCTGGACCTGAAGAGCACCCAGTGGGCGGCAAAGCCAAAGTGAAAACACCCTCCATCAATTCACTCATAAAGGGG
CACACCAAGCTAAGGATGGGTGTGGTGGAAAAATTCTACGCCGCTAAGCTCAATGTTGAGGAGTTTAGCGTGGAAATCAGTGGAAGGGTGGTGAACTTCAATGTGAAGGC
CATTAACGCGCTATATGACTTGTCCAATGATGTTGAGATGCCTGGGCATGAATACGTGGTCAACCCAACCACGAAAATGGCCCGTGAAGCCTTAGAAGACATCGTCTGGC
CTAGAGCCGCATGGAAAGTTACGCCGACGGGGAAATATCAACTTTATCCACACCAGTTGACCACAAAAGTAAGTGTGTGGCTTTTCTTCATAAAAAAGAAGATATTTCCC
ACGCGCCATGACAGCACCATCAACTTAGAGTCAGCGATGCTGCTCTATTGCATAATGACGAAGAAGCGCGTAAACCTCGACGATCTAATAGCTACATCCATCATGTCCTG
GACGCGATCTCCCAAGGGTGCCATGCCCTTCCCATCAACAGTCAAAGCTCTTTGCATGTGA
Protein sequenceShow/hide protein sequence
MAGSSSTHNDRIQVHSNGPESEQSVSRSSGEQETPKYTHLKHGKGKMLLKPPPEVDELCEELEVDMIDKGVMITFIARRQRRRKEEHLRRIRETHRRKDEHEWMRFEERH
KENNRGVQICLERKEDKKKMFTDLSEQVEELPAKYKALEPERYLEVIAKELEDELEAMSPIEQGPLPRKQSEVARPSKGKKKIRDSGPEEHPVGGKAKVKTPSINSLIKG
HTKLRMGVVEKFYAAKLNVEEFSVEISGRVVNFNVKAINALYDLSNDVEMPGHEYVVNPTTKMAREALEDIVWPRAAWKVTPTGKYQLYPHQLTTKVSVWLFFIKKKIFP
TRHDSTINLESAMLLYCIMTKKRVNLDDLIATSIMSWTRSPKGAMPFPSTVKALCM