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PI0015481 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015481
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:11278992..11280356
RNA-Seq ExpressionPI0015481
SyntenyPI0015481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-5864.17Show/hide
Query:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY
        + PQL HAN+HLLPGRA GS W+DQFCVTR ATHVVSQYRYMFDLLQRDQ                                            D+TQEY
Subjt:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY

Query:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE
        IHWYNNITRLYITR  AAVGHLRSNN RLRD+ DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPP+++GRVRVEE ELDEVYHNVEE
Subjt:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.3e-5272.79Show/hide
Query:  QRDQDMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHN------
        Q D D+TQEYIHWYNNITRLYITR GAAVGHLRSNN RLRD+  DPQQVLD+ NNNERYM+EIH MYD+PIVPP +++GRVRVEE ELDEVYHN      
Subjt:  QRDQDMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHN------

Query:  VEEDIMTQGSVYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL
          +DIM QGSV+RLHTWM+ H +LTCM+M  D A  NITNIC MKHL
Subjt:  VEEDIMTQGSVYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.3e-4871.53Show/hide
Query:  DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEEDIMTQGS
        D+TQ+YIHWYNNITRLYITR GAAVGHLRSNN +LRD+ DDPQQVLDICNNNERY+EEIH MYD+PIVPPP+++GRVRVEE ELDE            GS
Subjt:  DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEEDIMTQGS

Query:  VYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL
        ++ LHTWM+ HQLLTCM+MD      NITNIC MKHL
Subjt:  VYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-5160.96Show/hide
Query:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY
        + PQL HAN+HLLPGRA GS         R ATHVVSQYRYMFDLLQRDQ                                            D+TQEY
Subjt:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY

Query:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE
        IHWYNNITRLYITR GAAVGHLRSNN RLRD+ DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPP+++GRVRVEE ELDEVYHNVEE
Subjt:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-5846.22Show/hide
Query:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------
        + PQL H NDHLL GRA GS WRDQFCV RSAT+VV+QYRYMFDLLQRDQ                                                  
Subjt:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------

Query:  -------------------DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEE
                           D+TQEYIH YNNITRLYITR GA VGHLRSNN RLRD+V+DPQQVLDICNNNERYME+IH +YD+PIVPPP+++ R RVEE
Subjt:  -------------------DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEE

Query:  PELDEVYHNVEE-----DIMTQGSVYRLHTWMTDHQLLTCMN-----------------MDTDAAAENI---------TNICTMKHLP-DVPDPQEYQQE
         ELDEVYHNVEE        +Q       T M       C +                 MD   +   +          N       P DV D QEYQQE
Subjt:  PELDEVYHNVEE-----DIMTQGSVYRLHTWMTDHQLLTCMN-----------------MDTDAAAENI---------TNICTMKHLP-DVPDPQEYQQE

Query:  PENQEELGQPRVQSRRQQPTRNRRRPGCETH
        P+NQE+  Q RVQSRR+QP RNR+  GC TH
Subjt:  PENQEELGQPRVQSRRQQPTRNRRRPGCETH

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-5864.17Show/hide
Query:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY
        + PQL HAN+HLLPGRA GS W+DQFCVTR ATHVVSQYRYMFDLLQRDQ                                            D+TQEY
Subjt:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY

Query:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE
        IHWYNNITRLYITR  AAVGHLRSNN RLRD+ DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPP+++GRVRVEE ELDEVYHNVEE
Subjt:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.5e-5272.79Show/hide
Query:  QRDQDMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHN------
        Q D D+TQEYIHWYNNITRLYITR GAAVGHLRSNN RLRD+  DPQQVLD+ NNNERYM+EIH MYD+PIVPP +++GRVRVEE ELDEVYHN      
Subjt:  QRDQDMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHN------

Query:  VEEDIMTQGSVYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL
          +DIM QGSV+RLHTWM+ H +LTCM+M  D A  NITNIC MKHL
Subjt:  VEEDIMTQGSVYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X26.1e-4971.53Show/hide
Query:  DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEEDIMTQGS
        D+TQ+YIHWYNNITRLYITR GAAVGHLRSNN +LRD+ DDPQQVLDICNNNERY+EEIH MYD+PIVPPP+++GRVRVEE ELDE            GS
Subjt:  DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEEDIMTQGS

Query:  VYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL
        ++ LHTWM+ HQLLTCM+MD      NITNIC MKHL
Subjt:  VYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHL

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.7e-5260.96Show/hide
Query:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY
        + PQL HAN+HLLPGRA GS         R ATHVVSQYRYMFDLLQRDQ                                            D+TQEY
Subjt:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------DMTQEY

Query:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE
        IHWYNNITRLYITR GAAVGHLRSNN RLRD+ DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPP+++GRVRVEE ELDEVYHNVEE
Subjt:  IHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEEPELDEVYHNVEE

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein5.0e-5946.22Show/hide
Query:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------
        + PQL H NDHLL GRA GS WRDQFCV RSAT+VV+QYRYMFDLLQRDQ                                                  
Subjt:  MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQ--------------------------------------------------

Query:  -------------------DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEE
                           D+TQEYIH YNNITRLYITR GA VGHLRSNN RLRD+V+DPQQVLDICNNNERYME+IH +YD+PIVPPP+++ R RVEE
Subjt:  -------------------DMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPINKGRVRVEE

Query:  PELDEVYHNVEE-----DIMTQGSVYRLHTWMTDHQLLTCMN-----------------MDTDAAAENI---------TNICTMKHLP-DVPDPQEYQQE
         ELDEVYHNVEE        +Q       T M       C +                 MD   +   +          N       P DV D QEYQQE
Subjt:  PELDEVYHNVEE-----DIMTQGSVYRLHTWMTDHQLLTCMN-----------------MDTDAAAENI---------TNICTMKHLP-DVPDPQEYQQE

Query:  PENQEELGQPRVQSRRQQPTRNRRRPGCETH
        P+NQE+  Q RVQSRR+QP RNR+  GC TH
Subjt:  PENQEELGQPRVQSRRQQPTRNRRRPGCETH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACTATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAG
TCAATATAGGTACATGTTTGATCTTCTTCAACGTGATCAGGATATGACTCAAGAATACATCCACTGGTATAATAATATAACGAGGCTCTACATCACTCGACTAGGAGCAG
CTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATATTGTAGATGATCCGCAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACAT
TATATGTACGATGTACCTATTGTACCTCCACCAATTAACAAGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGATATAATGAC
TCAGGGGTCGGTCTATCGTCTTCATACATGGATGACGGACCATCAACTTCTTACATGCATGAACATGGACACGGACGCGGCCGCGGAGAACATAACAAATATCTGTACTA
TGAAGCACCTACCAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACAACAACCAACCCGT
AATCGACGACGTCCGGGTTGTGAAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACTATGGAGAGACCAATTTTGTGTAACAAGATCAGCTACTCATGTAGTTAG
TCAATATAGGTACATGTTTGATCTTCTTCAACGTGATCAGGATATGACTCAAGAATACATCCACTGGTATAATAATATAACGAGGCTCTACATCACTCGACTAGGAGCAG
CTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATATTGTAGATGATCCGCAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACAT
TATATGTACGATGTACCTATTGTACCTCCACCAATTAACAAGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAATGTAGAAGAAGATATAATGAC
TCAGGGGTCGGTCTATCGTCTTCATACATGGATGACGGACCATCAACTTCTTACATGCATGAACATGGACACGGACGCGGCCGCGGAGAACATAACAAATATCTGTACTA
TGAAGCACCTACCAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACGACAACAACCAACCCGT
AATCGACGACGTCCGGGTTGTGAAACACATTGA
Protein sequenceShow/hide protein sequence
MTPQLRHANDHLLPGRAHGSLWRDQFCVTRSATHVVSQYRYMFDLLQRDQDMTQEYIHWYNNITRLYITRLGAAVGHLRSNNRRLRDIVDDPQQVLDICNNNERYMEEIH
YMYDVPIVPPPINKGRVRVEEPELDEVYHNVEEDIMTQGSVYRLHTWMTDHQLLTCMNMDTDAAAENITNICTMKHLPDVPDPQEYQQEPENQEELGQPRVQSRRQQPTR
NRRRPGCETH