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PI0015486 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015486
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationchr06:26665719..26666252
RNA-Seq ExpressionPI0015486
SyntenyPI0015486
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.1e-0646.34Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-----GVAGGPEGIGSGAGVGLGLG
        M SKIVFL+ LGA + ST  ARKLS ASFQDEKF H P F G G   G       G    LG                  G AGG  G G G G G+G G
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-----GVAGGPEGIGSGAGVGLGLG

Query:  GSPVIDVGIGLGNGYGGGPSGGG
        GS     G G G G+GGG  GGG
Subjt:  GSPVIDVGIGLGNGYGGGPSGGG

KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]2.3e-0644.54Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-GVAGGPEGIGSGAGVGLGLGGSPV
        M SKIVFL+ LGA + +T  ARKLS ASFQDEKF H P + G G   G       G    LG              G  GG  G G G G G G GG   
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-GVAGGPEGIGSGAGVGLGLGGSPV

Query:  IDVGIGLGNGYGGGPSGGG
           G G G G+GGG  GGG
Subjt:  IDVGIGLGNGYGGGPSGGG

KAA0065832.1 hypothetical protein E6C27_scaffold37G001400 [Cucumis melo var. makuwa]2.8e-1555.83Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASF-QDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV
        MTSKIVFL+LLGALVCSTFEARKL++AS  QDEK      FE HG VDGELS   R   R+L A + V   +DL L             G  L   G+P 
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASF-QDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV

Query:  IDVGIGLGNGYGGGPSGGGK
         +VGIGLGNG GG PSGGGK
Subjt:  IDVGIGLGNGYGGGPSGGGK

KGN56077.1 hypothetical protein Csa_011309 [Cucumis sativus]1.4e-1457.5Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIA-SFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV
        MTSKIVFL+LLGALVCSTFEARKLSIA S QDEK      FE HG VDGELS  ARGL    G  I +  +  +SLGV     G+GS   + +   G+P 
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIA-SFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV

Query:  IDVGIGLGNGYGGGPSGGGK
        I+VGIG+  G   GPSGGGK
Subjt:  IDVGIGLGNGYGGGPSGGGK

XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]8.1e-0745.53Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-----GVAGGPEGIGSGAGVGLGLG
        M SKIVFL+ LGA + ST  ARKLS ASFQDEKF   P F G G   G       G    LG                  G AGG  G G G G G GLG
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-----GVAGGPEGIGSGAGVGLGLG

Query:  GSPVIDVGIGLGNGYGGGPSGGG
        G      G G G G GGG  GGG
Subjt:  GSPVIDVGIGLGNGYGGGPSGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein1.3e-0545.3Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPVI
        M SKIVFL+ LGA + ST  ARKLS ASFQDEKF   P F G G   G       G    LG             G +GG  G G G+G G G+GG    
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPVI

Query:  DVGIGLGNGYGGGPSGG
          G G G G+GGG  GG
Subjt:  DVGIGLGNGYGGGPSGG

A0A0A0L669 Uncharacterized protein6.6e-1557.5Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIA-SFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV
        MTSKIVFL+LLGALVCSTFEARKLSIA S QDEK      FE HG VDGELS  ARGL    G  I +  +  +SLGV     G+GS   + +   G+P 
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIA-SFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV

Query:  IDVGIGLGNGYGGGPSGGGK
        I+VGIG+  G   GPSGGGK
Subjt:  IDVGIGLGNGYGGGPSGGGK

A0A5A7VBZ1 Uncharacterized protein1.3e-1555.83Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASF-QDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV
        MTSKIVFL+LLGALVCSTFEARKL++AS  QDEK      FE HG VDGELS   R   R+L A + V   +DL L             G  L   G+P 
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASF-QDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPV

Query:  IDVGIGLGNGYGGGPSGGGK
         +VGIGLGNG GG PSGGGK
Subjt:  IDVGIGLGNGYGGGPSGGGK

A0A5A7VJD1 Glycine-rich cell wall structural protein-like1.1e-0644.54Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-GVAGGPEGIGSGAGVGLGLGGSPV
        M SKIVFL+ LGA + +T  ARKLS ASFQDEKF H P + G G   G       G    LG              G  GG  G G G G G G GG   
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-GVAGGPEGIGSGAGVGLGLGGSPV

Query:  IDVGIGLGNGYGGGPSGGG
           G G G G+GGG  GGG
Subjt:  IDVGIGLGNGYGGGPSGGG

A0A5D3BB90 Glycine-rich cell wall structural protein-like5.1e-0746.34Show/hide
Query:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-----GVAGGPEGIGSGAGVGLGLG
        M SKIVFL+ LGA + ST  ARKLS ASFQDEKF H P F G G   G       G    LG                  G AGG  G G G G G+G G
Subjt:  MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSL-----GVAGGPEGIGSGAGVGLGLG

Query:  GSPVIDVGIGLGNGYGGGPSGGG
        GS     G G G G+GGG  GGG
Subjt:  GSPVIDVGIGLGNGYGGGPSGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCAAAATTGTTTTTCTTCTTCTTCTTGGTGCTCTTGTCTGCTCCACTTTTGAAGCTCGCAAGCTGAGTATTGCCTCTTTCCAAGATGAGAAGTTTGTCCACCA
TCCCGAATTTGAGGGCCATGGCTTCGTTGATGGAGAGTTAAGTAGTGTTGCAAGAGGGTTAACTAGAGAGCTCGGTGCAAAGATAGATGTAGATCTAGATCTAGATCTTA
GTCTAGGTGTAGCTGGAGGCCCTGAAGGCATAGGGTCAGGTGCAGGTGTAGGTCTAGGTCTAGGTGGAAGCCCAGTGATCGATGTAGGCATAGGGTTAGGTAATGGTTAT
GGAGGTGGACCTAGTGGTGGTGGTAAGTAG
mRNA sequenceShow/hide mRNA sequence
AAAACTAATTATTGTGTGCCTTTTTACAAGAATATGACTTCCAAAATTGTTTTTCTTCTTCTTCTTGGTGCTCTTGTCTGCTCCACTTTTGAAGCTCGCAAGCTGAGTAT
TGCCTCTTTCCAAGATGAGAAGTTTGTCCACCATCCCGAATTTGAGGGCCATGGCTTCGTTGATGGAGAGTTAAGTAGTGTTGCAAGAGGGTTAACTAGAGAGCTCGGTG
CAAAGATAGATGTAGATCTAGATCTAGATCTTAGTCTAGGTGTAGCTGGAGGCCCTGAAGGCATAGGGTCAGGTGCAGGTGTAGGTCTAGGTCTAGGTGGAAGCCCAGTG
ATCGATGTAGGCATAGGGTTAGGTAATGGTTATGGAGGTGGACCTAGTGGTGGTGGTAAGTAGAGAGGTGATTCGATGGTGGTGTTTGATGCAAAAGGTGAATTCCCCCG
TGAAGAATAATGTTTTTACTACCAAGGAGAAATTAAGTTTCTTATCTATGCTATATAGTTTTTGGTATTTGTTTTTGTATGTGTAATGTGTGGC
Protein sequenceShow/hide protein sequence
MTSKIVFLLLLGALVCSTFEARKLSIASFQDEKFVHHPEFEGHGFVDGELSSVARGLTRELGAKIDVDLDLDLSLGVAGGPEGIGSGAGVGLGLGGSPVIDVGIGLGNGY
GGGPSGGGK