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PI0015502 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015502
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:10069600..10069764
RNA-Seq ExpressionPI0015502
SyntenyPI0015502
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1472.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
TYK26917.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-1372.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETSS W+QWRD+LAE+MF DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
TYK27175.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-1372.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DIQD++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF++WELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7UIM7 Putative nuclease HARBI14.4e-1472.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
A0A5A7VJX3 Retrotransposon protein5.7e-1472.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
A0A5D3BL48 Putative nuclease HARBI15.7e-1472.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
A0A5D3DT17 Retrotransposon protein7.4e-1472.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DI+D++DE DST+ATT  ++IHYIETSS W+QWRD+LAE+MF DWELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
A0A5D3DV38 Retrotransposon protein7.4e-1472.22Show/hide
Query:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
        MTN DIQD++DE DST+ATT  ++IHYIETS+ WSQWRD+LAE+MF++WELRNQ
Subjt:  MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACACTGACATACAAGACGACGTTGATGAGGGTGACTCTACATACGCCACCACTGGAAATGAAGAAATTCACTACATAGAGACCTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAATGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACACTGACATACAAGACGACGTTGATGAGGGTGACTCTACATACGCCACCACTGGAAATGAAGAAATTCACTACATAGAGACCTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAATGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNTDIQDDVDEGDSTYATTGNEEIHYIETSSAWSQWRDELAEKMFNDWELRNQ