; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015548 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015548
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr01:16846920..16848827
RNA-Seq ExpressionPI0015548
SyntenyPI0015548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032798.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.8e-8476.67Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR  VDAAA GALADKTP EARELI RMAENSQNFGNRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV +PNDKCP ++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +R+YDPH NTY  GWRDNPNLRWGNDNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKGKL AQPDH NVSAISLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.7e-8677.14Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR TVDA A GALADK PTEARELIS+MAENSQ+F NRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV HPNDKCP+++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +RKYDPH NTY +GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++ANVSA+SLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.5e-8770.66Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR T+D  A GALADKTPTEARELISRM ENSQ+FGNRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV HPNDKC  ++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +R+YDPHSNTY +GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKL AQPD+ANVSAISLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEKYDDELCLHEFDDEKEMVEVETDEKLNLDGINS
        IL+TP+++EK        E   E+E++E+   E++NL  +N+
Subjt:  ILETPSSEEKYDDELCLHEFDDEKEMVEVETDEKLNLDGINS

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-8571.25Show/hide
Query:  RTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANVI
        R T+D AA GALADKTPTEARELISRMAENS++FGNRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV HPNDKCP ++E+ N++
Subjt:  RTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGKI
        R+YDPHSNTY +GWRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKL AQPDHANVSAISLRSGKI
Subjt:  RKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGKI

Query:  LETPSSEEK--YDDELCLHEFDDEKEMVEVETDEKLNLDG
        L+TP+++EK      L L+  ++ KE  +V++ ++ N  G
Subjt:  LETPSSEEK--YDDELCLHEFDDEKEMVEVETDEKLNLDG

TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.7e-8476.19Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR TVDA A  ALADKTPTEA ELISRMAEN Q+FGNRAS+L N LTKEVSELKS+MLNMTTLLTSFVQG  FK+ KCGVCGLV HPNDKCP+++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +R+YDPH NTY  GWRD PNLRWGND Q  +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKL AQPDHANVSAISLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

TrEMBL top hitse value%identityAlignment
A0A5A7SQH8 Retrotransposon gag protein4.7e-8476.67Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR  VDAAA GALADKTP EARELI RMAENSQNFGNRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV +PNDKCP ++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +R+YDPH NTY  GWRDNPNLRWGNDNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKGKL AQPDH NVSAISLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

A0A5A7V0Q7 Retrotransposon gag protein7.0e-8870.66Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR T+D  A GALADKTPTEARELISRM ENSQ+FGNRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV HPNDKC  ++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +R+YDPHSNTY +GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKL AQPD+ANVSAISLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEKYDDELCLHEFDDEKEMVEVETDEKLNLDGINS
        IL+TP+++EK        E   E+E++E+   E++NL  +N+
Subjt:  ILETPSSEEKYDDELCLHEFDDEKEMVEVETDEKLNLDGINS

A0A5D3CB46 Retrotransposon gag protein8.6e-8671.25Show/hide
Query:  RTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANVI
        R T+D AA GALADKTPTEARELISRMAENS++FGNRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV HPNDKCP ++E+ N++
Subjt:  RTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGKI
        R+YDPHSNTY +GWRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKL AQPDHANVSAISLRSGKI
Subjt:  RKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGKI

Query:  LETPSSEEK--YDDELCLHEFDDEKEMVEVETDEKLNLDG
        L+TP+++EK      L L+  ++ KE  +V++ ++ N  G
Subjt:  LETPSSEEK--YDDELCLHEFDDEKEMVEVETDEKLNLDG

A0A5D3CFE7 Retrotransposon gag protein2.8e-8476.19Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR TVDA A  ALADKTPTEA ELISRMAEN Q+FGNRAS+L N LTKEVSELKS+MLNMTTLLTSFVQG  FK+ KCGVCGLV HPNDKCP+++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +R+YDPH NTY  GWRD PNLRWGND Q  +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKL AQPDHANVSAISLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

A0A5D3CRR8 Retrotransposon gag protein2.3e-8677.14Show/hide
Query:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV
        DR TVDA A GALADK PTEARELIS+MAENSQ+F NRASEL NSLTKEVSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLV HPNDKCP+++E+ N+
Subjt:  DRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK
        +RKYDPH NTY +GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++ANVSA+SLRSGK
Subjt:  IRKYDPHSNTYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAACTACAGTAGATGCTGCAGCAGATGGTGCATTGGCTGACAAAACCCCTACTGAGGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTGG
AAATAGGGCATCCGAGCTCCACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGAGGATCTT
TTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGAACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAAGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACTTACACTGCCGGTTGGAGAGACAATCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACTATATCTTTTCAGAATGAAATGAAGCAACAGATGTCTCATCTTACCAATGCGATAAGCAAATTAGAGGGTAAAGGCAAACTTC
TGGCTCAGCCTGATCATGCAAACGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGTATGATGATGAGCTTTGTTTGCATGAG
TTTGATGATGAAAAAGAGATGGTAGAAGTAGAAACGGATGAAAAATTAAATCTTGATGGGATAAATTCTAACACTTTGTTTGCATGGGATATGATACAAAGCCCCCACAC
AAGCCCTAATGCACAAAAGAGAGCTAAAACAAGCTCCTTGCGAACAAAATTGGTGAATTACAAATCCAAGGGCAAATCAGTAATCTCCCAAGGCATTCAAATTCATCCTC
GCGACAGAACCAATCCAAGATCGCATAGCTCATCGCAACCTGCCTTAACCGCAAGGCATTGCCTTCTGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAACTACAGTAGATGCTGCAGCAGATGGTGCATTGGCTGACAAAACCCCTACTGAGGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTGG
AAATAGGGCATCCGAGCTCCACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGAGGATCTT
TTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGAACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAAGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACTTACACTGCCGGTTGGAGAGACAATCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTCTTGCTACTAATACTATATCTTTTCAGAATGAAATGAAGCAACAGATGTCTCATCTTACCAATGCGATAAGCAAATTAGAGGGTAAAGGCAAACTTC
TGGCTCAGCCTGATCATGCAAACGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGTATGATGATGAGCTTTGTTTGCATGAG
TTTGATGATGAAAAAGAGATGGTAGAAGTAGAAACGGATGAAAAATTAAATCTTGATGGGATAAATTCTAACACTTTGTTTGCATGGGATATGATACAAAGCCCCCACAC
AAGCCCTAATGCACAAAAGAGAGCTAAAACAAGCTCCTTGCGAACAAAATTGGTGAATTACAAATCCAAGGGCAAATCAGTAATCTCCCAAGGCATTCAAATTCATCCTC
GCGACAGAACCAATCCAAGATCGCATAGCTCATCGCAACCTGCCTTAACCGCAAGGCATTGCCTTCTGACTTGA
Protein sequenceShow/hide protein sequence
MDRTTVDAAADGALADKTPTEARELISRMAENSQNFGNRASELHNSLTKEVSELKSQMLNMTTLLTSFVQGGSFKIAKCGVCGLVEHPNDKCPDLVEEANVIRKYDPHSN
TYTAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPSSEEKYDDELCLHE
FDDEKEMVEVETDEKLNLDGINSNTLFAWDMIQSPHTSPNAQKRAKTSSLRTKLVNYKSKGKSVISQGIQIHPRDRTNPRSHSSSQPALTARHCLLT