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PI0015556 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015556
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:5353584..5353985
RNA-Seq ExpressionPI0015556
SyntenyPI0015556
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]4.9e-6185.5Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGIR DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF++ SLM  GT+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+G SIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]2.4e-6084.73Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGI+ DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF+  SLM   T+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.1e-6085.5Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGIR DLKD+TYLAAFLSCWLCLFVFPQKGSFL  GVF++ SLM  GT+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]3.7e-6185.5Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGI+ DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF+  SLMT GT+YSLAVPVLANIYHGLGLIT+ASNP  RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]2.4e-6084.73Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGI+ DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF+  SLM   T+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein2.4e-6185.5Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGIR DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF++ SLM  GT+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+G SIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

A0A5A7TZZ9 PMD domain-containing protein1.2e-6084.73Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGI+ DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF+  SLM   T+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

A0A5A7UGW6 PMD domain-containing protein5.2e-6185.5Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGIR DLKD+TYLAAFLSCWLCLFVFPQKGSFL  GVF++ SLM  GT+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

A0A5A7VHW8 PMD domain-containing protein1.8e-6185.5Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGI+ DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF+  SLMT GT+YSLAVPVLANIYHGLGLIT+ASNP  RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

A0A5D3C543 PMD domain-containing protein1.2e-6084.73Show/hide
Query:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN
        M F ELGI+ DLKD+TYLAAFLSCWLCLFVFPQKGSFL PGVF+  SLM   T+YSLAVPVLANIYHGLGLIT+ASNPI RM+FHFPMHYVHGWLAHYF 
Subjt:  MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFN

Query:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA
        THYPLP EVRGPKM+NFSG+GGSIYFGEYEA
Subjt:  THYPLPAEVRGPKMSNFSGKGGSIYFGEYEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCGGAGAACTTGGGATAAGGGCTGACTTGAAGGATAAAACATATTTAGCTGCCTTTCTATCTTGTTGGTTATGCCTCTTTGTGTTTCCACAAAAGGGGTCATT
TCTTCACCCTGGGGTTTTCAAGATCACAAGCTTAATGACCGATGGGACTGTCTATAGTCTTGCAGTCCCTGTTTTAGCCAACATATATCATGGGCTAGGTCTGATAACTG
AAGCCTCGAACCCAATCAGACGCATGAACTTTCATTTTCCCATGCATTACGTCCATGGCTGGTTGGCCCATTATTTTAACACACATTACCCACTTCCAGCCGAAGTTCGA
GGTCCCAAGATGTCCAACTTTTCTGGTAAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGGAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTCGGAGAACTTGGGATAAGGGCTGACTTGAAGGATAAAACATATTTAGCTGCCTTTCTATCTTGTTGGTTATGCCTCTTTGTGTTTCCACAAAAGGGGTCATT
TCTTCACCCTGGGGTTTTCAAGATCACAAGCTTAATGACCGATGGGACTGTCTATAGTCTTGCAGTCCCTGTTTTAGCCAACATATATCATGGGCTAGGTCTGATAACTG
AAGCCTCGAACCCAATCAGACGCATGAACTTTCATTTTCCCATGCATTACGTCCATGGCTGGTTGGCCCATTATTTTAACACACATTACCCACTTCCAGCCGAAGTTCGA
GGTCCCAAGATGTCCAACTTTTCTGGTAAAGGTGGGTCTATTTATTTTGGAGAATATGAGGCGGAGAACTGA
Protein sequenceShow/hide protein sequence
MFFGELGIRADLKDKTYLAAFLSCWLCLFVFPQKGSFLHPGVFKITSLMTDGTVYSLAVPVLANIYHGLGLITEASNPIRRMNFHFPMHYVHGWLAHYFNTHYPLPAEVR
GPKMSNFSGKGGSIYFGEYEAEN