CuGenDBv2

Gene ID	PI0015573
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	CDT1-like protein a
Genome location	chr12:1868053..1871165
RNA-Seq Expression	PI0015573
Synteny	PI0015573
Gene Ontology terms	GO:0000076 - DNA replication checkpoint (biological process) GO:0000278 - mitotic cell cycle (biological process) GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process) GO:0071163 - DNA replication preinitiation complex assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0070182 - DNA polymerase binding (molecular function)
InterPro domains	IPR014939 - CDT1 Geminin-binding domain-like IPR032054 - DNA replication factor Cdt1, C-terminal IPR036390 - Winged helix DNA-binding domain superfamily IPR038090 - DNA replication factor Cdt1, C-terminal WH domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008437096.1 PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo]

3.0e-211

83.27

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV
        MGEKTF+D GG NVSAIETNPSMDKQIEGI+GNQNSESNIACMTPEKADEYLKGKLKEE IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVS QV
Subjt:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV

Query:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF
        SVMTKR FLDKHLAQIVYIIPEAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVF SRV KYFA H E+ EVPEGALP PFNRRK+F
Subjt:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF

Query:  SL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLV
        SL    DN+ ERS+P SIDSDLTLEEL                                   +CSSLKEEDTNDKLLEDIPT  + PQ AAANSSESPLV
Subjt:  SL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLV

Query:  KSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHES
        KS LSSASSSIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGMEGDNG+SSLGV+DLQ   IPGKKNFLDE F+KK+YTS+EVI  ES
Subjt:  KSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHES

Query:  SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKT RI
Subjt:  SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

XP_008437112.1 PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo]

5.3e-168

81.22

Show/hide

Query:  MRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHP
        MRLLKMRKKMSTFHNVS QVSVMTKR FLDKHLAQIVYIIPEAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVF SRV KYFA H 
Subjt:  MRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHP

Query:  EEREVPEGALPNPFNRRKMFSL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDI
        E+ EVPEGALP PFNRRK+FSL    DN+ ERS+P SIDSDLTLEEL                                   +CSSLKEEDTNDKLLEDI
Subjt:  EEREVPEGALPNPFNRRKMFSL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDI

Query:  PTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNF
        PT  + PQ AAANSSESPLVKS LSSASSSIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGMEGDNG+SSLGV+DLQ   IPGKKNF
Subjt:  PTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNF

Query:  LDEQFQKKSYTSEEVICHESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDL
        LDE F+KK+YTS+EVI  ESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDL
Subjt:  LDEQFQKKSYTSEEVICHESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDL

Query:  ESVVAKTTRI
        ESVVAKT RI
Subjt:  ESVVAKTTRI

XP_011651063.1 CDT1-like protein a, chloroplastic [Cucumis sativus]

3.1e-200

80.67

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV
        MGEKTFED GGQN+SAIETNPS     +GIYGN+NSESNIACMTPEKADEYLKGKLKE+GIKLQEKC+ IVEFFTC TSS+RLLKMRK+MSTFHNVS QV
Subjt:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV

Query:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF
        S+MTKR FLDKHLAQI+YIIPEAVNIDKVMIHDKKTLCMKPEMII+LQLD+VKGHSEHSDFLALHKVF SRVSKYFA HPE+ EVPEG LP PFNRRK+F
Subjt:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF

Query:  SL----DNASERSQPISI--DSDLTLEEL------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASS
        SL    DN+S RS+PISI  DSDLTLEEL                        + S +       KLLEDIPT  ISPQ A ANSS+SPLVKS +SSASS
Subjt:  SL----DNASERSQPISI--DSDLTLEEL------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASS

Query:  SIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHESSSCLPELVC
        SIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGME DNG+SSLGV+ LQCYEIPGKKNFLDE  QKK+YTS+EVI  ESSSCLPELVC
Subjt:  SIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHESSSCLPELVC

Query:  VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKT RI
Subjt:  VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

XP_022954488.1 CDT1-like protein a, chloroplastic [Cucurbita moschata]

1.5e-157

66.67

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNP-SMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQ
        MGEKT ED G  +VSAIE NP       EG+ G      N+ CMTPEK DEY KGKLKE GIK QEK Q+IVEFFTCL SS+RLL MRKK+STFHNVS Q
Subjt:  MGEKTFEDGGGQNVSAIETNP-SMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQ

Query:  VSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKM
        VSVM+KR+FL +HLAQIVY IPE V IDKV IHDKKT CMK EMIISL+LD VKGHSEHSDFLALHKVF SRV+K+F  HPE+ EVPE ALP PFNRR +
Subjt:  VSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKM

Query:  -FSL----DNASERSQPISIDSDLTLE--------------------ELS---------------CSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESP
         FSL    D++SE+S+PIS+ ++L+ E                    ELS               CS  +EED ND LLED+P QSISP+ A ANSSESP
Subjt:  -FSL----DNASERSQPISIDSDLTLE--------------------ELS---------------CSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESP

Query:  LVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICH
        +VK   +S SS+I+TQTPVQ TPKRSMLPSSDVK RKTASVGS+CKPAKRFLNFSGMEGDNG  S  V+DLQCY+IP K++F  E+++K S +S  V C 
Subjt:  LVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICH

Query:  ESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        E SSCLPELV V+YN+FKSVNC+SITKEELVHKIIMN LDITERREVEE+IEQLEK VP+WISKKLT SGDVTFSI+ KEDLESVVAKT  +
Subjt:  ESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

XP_038893531.1 CDT1-like protein a, chloroplastic [Benincasa hispida]

1.5e-194

78.42

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Query:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV
        MGEKTFED GGQ V  IE NPS+DK  E   G +NS +NIACMTPEKADE+LKGKLKEEGIKLQEKCQTIVEFFTCLTSS+RLL+MRKK+STFHNVSCQV
Subjt:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV

Query:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF
        SVMTKR+FLD+HLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLD+VKGH EHSDFLALHKVF SRV+KYF  HPE+ EVPEG LP PFNRRKM 
Subjt:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF

Query:  SLDNASER-SQPISIDSDLTLEEL----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFL
        SLD +S+  SQPISI++DL+LEEL                                     SLKEED NDKLLE+IPTQSISPQ  AANSSESPL K   
Subjt:  SLDNASER-SQPISIDSDLTLEEL----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFL

Query:  SSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSE-EVICHESSSC
        SSASS+IMTQTPVQLTPKRSMLPSSDVKTRK ASVGSVCKPAKRFLNFSGMEGDNGESSL V+DLQCYEIP KKNFLDE FQKKS TS  EVIC ESSSC
Subjt:  SSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSE-EVICHESSSC

Query:  LPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVA
        LPE+V VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVE++IEQLEKLVPNWISKK T SGDVTFSIN KEDLESV++
Subjt:  LPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQM9 CDT1 domain-containing protein

1.5e-200

80.67

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV
        MGEKTFED GGQN+SAIETNPS     +GIYGN+NSESNIACMTPEKADEYLKGKLKE+GIKLQEKC+ IVEFFTC TSS+RLLKMRK+MSTFHNVS QV
Subjt:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV

Query:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF
        S+MTKR FLDKHLAQI+YIIPEAVNIDKVMIHDKKTLCMKPEMII+LQLD+VKGHSEHSDFLALHKVF SRVSKYFA HPE+ EVPEG LP PFNRRK+F
Subjt:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF

Query:  SL----DNASERSQPISI--DSDLTLEEL------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASS
        SL    DN+S RS+PISI  DSDLTLEEL                        + S +       KLLEDIPT  ISPQ A ANSS+SPLVKS +SSASS
Subjt:  SL----DNASERSQPISI--DSDLTLEEL------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASS

Query:  SIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHESSSCLPELVC
        SIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGME DNG+SSLGV+ LQCYEIPGKKNFLDE  QKK+YTS+EVI  ESSSCLPELVC
Subjt:  SIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHESSSCLPELVC

Query:  VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKT RI
Subjt:  VVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

A0A1S3AT80 CDT1-like protein a, chloroplastic isoform X2

2.6e-168

81.22

Show/hide

Query:  MRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHP
        MRLLKMRKKMSTFHNVS QVSVMTKR FLDKHLAQIVYIIPEAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVF SRV KYFA H 
Subjt:  MRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHP

Query:  EEREVPEGALPNPFNRRKMFSL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDI
        E+ EVPEGALP PFNRRK+FSL    DN+ ERS+P SIDSDLTLEEL                                   +CSSLKEEDTNDKLLEDI
Subjt:  EEREVPEGALPNPFNRRKMFSL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDI

Query:  PTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNF
        PT  + PQ AAANSSESPLVKS LSSASSSIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGMEGDNG+SSLGV+DLQ   IPGKKNF
Subjt:  PTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNF

Query:  LDEQFQKKSYTSEEVICHESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDL
        LDE F+KK+YTS+EVI  ESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDL
Subjt:  LDEQFQKKSYTSEEVICHESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDL

Query:  ESVVAKTTRI
        ESVVAKT RI
Subjt:  ESVVAKTTRI

A0A1S3ATS0 CDT1-like protein a, chloroplastic isoform X1

1.4e-211

83.27

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV
        MGEKTF+D GG NVSAIETNPSMDKQIEGI+GNQNSESNIACMTPEKADEYLKGKLKEE IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVS QV
Subjt:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV

Query:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF
        SVMTKR FLDKHLAQIVYIIPEAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVF SRV KYFA H E+ EVPEGALP PFNRRK+F
Subjt:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF

Query:  SL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLV
        SL    DN+ ERS+P SIDSDLTLEEL                                   +CSSLKEEDTNDKLLEDIPT  + PQ AAANSSESPLV
Subjt:  SL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLV

Query:  KSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHES
        KS LSSASSSIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGMEGDNG+SSLGV+DLQ   IPGKKNFLDE F+KK+YTS+EVI  ES
Subjt:  KSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHES

Query:  SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKT RI
Subjt:  SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

A0A5D3BIY5 CDT1-like protein a

1.4e-211

83.27

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV
        MGEKTF+D GG NVSAIETNPSMDKQIEGI+GNQNSESNIACMTPEKADEYLKGKLKEE IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVS QV
Subjt:  MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQV

Query:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF
        SVMTKR FLDKHLAQIVYIIPEAVNIDKVMIHDKKT CMKPEMIISLQLD+VKGHSEHSDFLALHKVF SRV KYFA H E+ EVPEGALP PFNRRK+F
Subjt:  SVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMF

Query:  SL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLV
        SL    DN+ ERS+P SIDSDLTLEEL                                   +CSSLKEEDTNDKLLEDIPT  + PQ AAANSSESPLV
Subjt:  SL----DNASERSQPISIDSDLTLEEL-----------------------------------SCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLV

Query:  KSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHES
        KS LSSASSSIMTQTPVQLTPKRSMLPSS+VKTRK ASVGSVCKPAKRFLNFSGMEGDNG+SSLGV+DLQ   IPGKKNFLDE F+KK+YTS+EVI  ES
Subjt:  KSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICHES

Query:  SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEE+IEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKT RI
Subjt:  SSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

A0A6J1GR86 CDT1-like protein a, chloroplastic

7.0e-158

66.67

Show/hide

Query:  MGEKTFEDGGGQNVSAIETNP-SMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQ
        MGEKT ED G  +VSAIE NP       EG+ G      N+ CMTPEK DEY KGKLKE GIK QEK Q+IVEFFTCL SS+RLL MRKK+STFHNVS Q
Subjt:  MGEKTFEDGGGQNVSAIETNP-SMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQ

Query:  VSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKM
        VSVM+KR+FL +HLAQIVY IPE V IDKV IHDKKT CMK EMIISL+LD VKGHSEHSDFLALHKVF SRV+K+F  HPE+ EVPE ALP PFNRR +
Subjt:  VSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKM

Query:  -FSL----DNASERSQPISIDSDLTLE--------------------ELS---------------CSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESP
         FSL    D++SE+S+PIS+ ++L+ E                    ELS               CS  +EED ND LLED+P QSISP+ A ANSSESP
Subjt:  -FSL----DNASERSQPISIDSDLTLE--------------------ELS---------------CSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESP

Query:  LVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICH
        +VK   +S SS+I+TQTPVQ TPKRSMLPSSDVK RKTASVGS+CKPAKRFLNFSGMEGDNG  S  V+DLQCY+IP K++F  E+++K S +S  V C 
Subjt:  LVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDLQCYEIPGKKNFLDEQFQKKSYTSEEVICH

Query:  ESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI
        E SSCLPELV V+YN+FKSVNC+SITKEELVHKIIMN LDITERREVEE+IEQLEK VP+WISKKLT SGDVTFSI+ KEDLESVVAKT  +
Subjt:  ESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTTRI

SwissProt top hits

e value

%identity

Alignment

Q9M1S9 CDT1-like protein b

8.3e-31

28.73

Show/hide

Query:  SESNIACMTPEKADE---YLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIH
        SES  +  TP K  +   +      E  IKL E+ + + EFF  L +++RLLK++   +T+ N+  ++  +T R F   HLAQ+ +I PEA+ + +V+  
Subjt:  SESNIACMTPEKADE---YLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIH

Query:  DKKTLCMKPEMIISLQLD--LVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFN--RRKMFSLDNASERSQP-ISIDS-DLTLEELSCS
         + T CMKP + I L  D  +V+     + ++ L KVF S++  +   HP++ E+P+  LP PFN  +R  +S   +    +P + +   D+ +EE+   
Subjt:  DKKTLCMKPEMIISLQLD--LVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFN--RRKMFSLDNASERSQP-ISIDS-DLTLEELSCS

Query:  SLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGD-------
          +EE   +K++ D     I  +       +       LS+    +     +QL+ +   L           S  S+ +   R LNF   E D       
Subjt:  SLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGD-------

Query:  -NGESSLGV---ED--LQCYEIPGKK-NF--LDEQF------------QKKSYTSEEVICHES--------------SSCLPELVCVVYNIFKSVNCSSI
         N     G+   ED  LQ  + P +  NF  L+E+             +K +Y  +     +S                 LP+LV +++ +F S N + I
Subjt:  -NGESSLGV---ED--LQCYEIPGKK-NF--LDEQF------------QKKSYTSEEVICHES--------------SSCLPELVCVVYNIFKSVNCSSI

Query:  TKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK
        TKEEL++KII N ++IT+RREVEE++  + +LVP+WIS+    SGD+   IN     E+V A+
Subjt:  TKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK

Q9SJW9 CDT1-like protein a, chloroplastic

3.1e-38

30.77

Show/hide

Query:  TPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEM
        +P K     K   KE   KL EK + + +FF  L +SM L K+R    TF N+S Q+  +T+R F   HLAQI +I+PEA+ I +V+IHD+ T CMKP++
Subjt:  TPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEM

Query:  IISLQLDLVKGHSE---HSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMFSLDNASER-----------------------SQPISIDSD
         ++L  D V+ + +    S  +AL KVF +R++ +   HP+  EVPE  LP PFNRRK     N   +                       S P+   S 
Subjt:  IISLQLDLVKGHSE---HSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMFSLDNASER-----------------------SQPISIDSD

Query:  L---TLEELSCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQL--TPKRSMLPSSDVKTRKTA---------SVGSV
        L   T  +++ +    + T+    + +   +I P      S+ +    +     S+ ++T TP +   TP R M  S   +  K +         S    
Subjt:  L---TLEELSCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQL--TPKRSMLPSSDVKTRKTA---------SVGSV

Query:  CKPAKR--FLNFSGMEGDN--------------GESSLGVEDLQCYEIPGK-KNFLDEQFQKKSYTSEEVIC-----HESSSCLPELVCVVYNIFKSVNC
         K  +R   LNF     D                E  +  +D     +P K ++ + EQ +K        I       +  +CLP+L  V++ + +S+  
Subjt:  CKPAKR--FLNFSGMEGDN--------------GESSLGVEDLQCYEIPGK-KNFLDEQFQKKSYTSEEVIC-----HESSSCLPELVCVVYNIFKSVNC

Query:  SSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSIN
          ITKEELVHKII    DIT+R+EVEE++  L+++VP W+S+K + SGDV   IN
Subjt:  SSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSIN

Arabidopsis top hits

e value

%identity

Alignment

AT2G31270.1 homolog of yeast CDT1 A

2.2e-39

30.77

Show/hide

Query:  TPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEM
        +P K     K   KE   KL EK + + +FF  L +SM L K+R    TF N+S Q+  +T+R F   HLAQI +I+PEA+ I +V+IHD+ T CMKP++
Subjt:  TPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEM

Query:  IISLQLDLVKGHSE---HSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMFSLDNASER-----------------------SQPISIDSD
         ++L  D V+ + +    S  +AL KVF +R++ +   HP+  EVPE  LP PFNRRK     N   +                       S P+   S 
Subjt:  IISLQLDLVKGHSE---HSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMFSLDNASER-----------------------SQPISIDSD

Query:  L---TLEELSCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQL--TPKRSMLPSSDVKTRKTA---------SVGSV
        L   T  +++ +    + T+    + +   +I P      S+ +    +     S+ ++T TP +   TP R M  S   +  K +         S    
Subjt:  L---TLEELSCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQL--TPKRSMLPSSDVKTRKTA---------SVGSV

Query:  CKPAKR--FLNFSGMEGDN--------------GESSLGVEDLQCYEIPGK-KNFLDEQFQKKSYTSEEVIC-----HESSSCLPELVCVVYNIFKSVNC
         K  +R   LNF     D                E  +  +D     +P K ++ + EQ +K        I       +  +CLP+L  V++ + +S+  
Subjt:  CKPAKR--FLNFSGMEGDN--------------GESSLGVEDLQCYEIPGK-KNFLDEQFQKKSYTSEEVIC-----HESSSCLPELVCVVYNIFKSVNC

Query:  SSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSIN
          ITKEELVHKII    DIT+R+EVEE++  L+++VP W+S+K + SGDV   IN
Subjt:  SSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSIN

AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B

5.9e-32

28.73

Show/hide

Query:  SESNIACMTPEKADE---YLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIH
        SES  +  TP K  +   +      E  IKL E+ + + EFF  L +++RLLK++   +T+ N+  ++  +T R F   HLAQ+ +I PEA+ + +V+  
Subjt:  SESNIACMTPEKADE---YLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLDKHLAQIVYIIPEAVNIDKVMIH

Query:  DKKTLCMKPEMIISLQLD--LVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFN--RRKMFSLDNASERSQP-ISIDS-DLTLEELSCS
         + T CMKP + I L  D  +V+     + ++ L KVF S++  +   HP++ E+P+  LP PFN  +R  +S   +    +P + +   D+ +EE+   
Subjt:  DKKTLCMKPEMIISLQLD--LVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFN--RRKMFSLDNASERSQP-ISIDS-DLTLEELSCS

Query:  SLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGD-------
          +EE   +K++ D     I  +       +       LS+    +     +QL+ +   L           S  S+ +   R LNF   E D       
Subjt:  SLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGD-------

Query:  -NGESSLGV---ED--LQCYEIPGKK-NF--LDEQF------------QKKSYTSEEVICHES--------------SSCLPELVCVVYNIFKSVNCSSI
         N     G+   ED  LQ  + P +  NF  L+E+             +K +Y  +     +S                 LP+LV +++ +F S N + I
Subjt:  -NGESSLGV---ED--LQCYEIPGKK-NF--LDEQF------------QKKSYTSEEVICHES--------------SSCLPELVCVVYNIFKSVNCSSI

Query:  TKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK
        TKEEL++KII N ++IT+RREVEE++  + +LVP+WIS+    SGD+   IN     E+V A+
Subjt:  TKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGTGAAAAAACATTTGAAGATGGTGGTGGCCAAAATGTTTCAGCCATTGAAACTAATCCTTCTATGGACAAACAAATTGAAGGGATTTATGGTAATCAGAATTCAGA
AAGTAACATTGCATGTATGACACCAGAGAAAGCTGATGAGTATTTGAAAGGAAAATTGAAAGAAGAAGGAATCAAGCTTCAAGAAAAATGCCAAACAATTGTAGAGTTCT
TTACTTGCTTGACTTCCTCGATGAGGCTGCTTAAAATGAGAAAGAAGATGTCTACCTTTCACAATGTATCCTGTCAGGTGTCGGTTATGACAAAAAGAGAGTTTTTGGAC
AAACATCTAGCACAGATAGTATATATTATTCCAGAAGCTGTGAATATTGATAAAGTGATGATTCATGACAAAAAGACATTATGCATGAAACCAGAAATGATAATCAGTCT
TCAATTAGACCTTGTCAAAGGTCACTCCGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCACTTCAAGGGTGTCAAAATACTTTGCAACGCATCCGGAGGAAAGGG
AAGTTCCAGAGGGGGCATTACCAAATCCCTTCAACCGAAGAAAAATGTTCTCTCTTGATAATGCTTCAGAAAGATCTCAGCCAATATCCATAGATTCCGATTTGACTTTA
GAAGAACTTTCTTGTAGCAGCCTGAAAGAAGAAGATACCAATGATAAGTTGCTTGAAGATATTCCAACACAGTCAATCTCTCCTCAAGCTGCTGCTGCTAATTCTTCTGA
GAGTCCTCTTGTTAAGTCTTTCCTGTCTTCTGCTTCTAGCAGCATAATGACACAAACACCGGTACAGTTGACACCAAAGAGATCAATGCTGCCAAGTTCCGACGTAAAAA
CGAGGAAAACTGCAAGTGTAGGAAGTGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTGAGTCGAGTCTAGGTGTGGAGGATTTG
CAATGCTATGAAATCCCTGGAAAGAAGAACTTTCTTGATGAGCAATTTCAAAAGAAGAGTTATACTAGTGAAGAAGTAATTTGTCATGAATCATCTTCTTGCTTGCCCGA
ACTTGTTTGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTCGTGCACAAGATTATAATGAATTGTCTTGATATTACTGAGAGAA
GAGAAGTGGAAGAGAAAATCGAGCAGCTCGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAATTAGTGGGGATGTTACTTTTAGCATCAACACAAAGGAAGAC
TTAGAATCGGTTGTGGCAAAAACAACTCGCATTTGA

mRNA sequence

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Protein sequence

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MGEKTFEDGGGQNVSAIETNPSMDKQIEGIYGNQNSESNIACMTPEKADEYLKGKLKEEGIKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSCQVSVMTKREFLD
KHLAQIVYIIPEAVNIDKVMIHDKKTLCMKPEMIISLQLDLVKGHSEHSDFLALHKVFTSRVSKYFATHPEEREVPEGALPNPFNRRKMFSLDNASERSQPISIDSDLTL
EELSCSSLKEEDTNDKLLEDIPTQSISPQAAAANSSESPLVKSFLSSASSSIMTQTPVQLTPKRSMLPSSDVKTRKTASVGSVCKPAKRFLNFSGMEGDNGESSLGVEDL
QCYEIPGKKNFLDEQFQKKSYTSEEVICHESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEEKIEQLEKLVPNWISKKLTISGDVTFSINTKED
LESVVAKTTRI

PI0015573 (gene) of Melon (PI 482460) v1 genome