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PI0015581 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015581
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:17356559..17358860
RNA-Seq ExpressionPI0015581
SyntenyPI0015581
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]2.1e-4735.71Show/hide
Query:  VLAHDVKNRVVQREFMRF---EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDND
        +LA  + + ++ RE   F   ++ ++ DS +ATT  DD HYI+TSNE S WRD+LAEE+ +   ++   P + WTKEEE+ LV CLVELV+ GGW+SDN 
Subjt:  VLAHDVKNRVVQREFMRF---EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDND

Query:  TSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN----------------------------
        T   GYL QL RMMA K+PG NI  S TID RIK MK+ F A+ EM G +CSGF WNDE KCI+AEKE+FD+                            
Subjt:  TSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN----------------------------

Query:  -------------------------------------------------------LDERASCA-------------------------------------
                                                               + ER + +                                     
Subjt:  -------------------------------------------------------LDERASCA-------------------------------------

Query:  -----------EVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDYCTIILEEN
                   E+VR L+ IPEL+  +R RL+RI+MRNV+DMKAFLEVPD +K  YC++IL+EN
Subjt:  -----------EVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDYCTIILEEN

KAA0036924.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-4762.34Show/hide
Query:  EDYNDGDSIYATTT-GDDNHYIKTSNERSHWRDDLAEEMFSE--LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKM
        ED ++GDS YATTT  +D  YI+T+NE S WRD+LA  MF++  +     AP ++WT+EEE  LV CL+ELVS GGWKSDN T   GYLAQL RMMAEK+
Subjt:  EDYNDGDSIYATTT-GDDNHYIKTSNERSHWRDDLAEEMFSE--LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKM

Query:  PGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN
        PGC ++ +  IDCRIK +K+TFQAI EM G +CSGF WNDE KCI+AEKELFDN
Subjt:  PGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN

KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-4637.85Show/hide
Query:  EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSE------LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMA
        ++ ++ DS +ATT  DD HYI+ SNE + WRDDL EEMF++      +      P + WTKEEE+ LV CLVELV+ GGW+ DN T   GYL QL+RMM 
Subjt:  EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSE------LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMA

Query:  EKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN-------------------------------------------
         K+  CNI  SP  D RIK MK+ F A+ EM G +CSGF WNDE KCI+AEKE+F++                                           
Subjt:  EKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN-------------------------------------------

Query:  --------------------------------------------------------LDERASCAEVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLE
                                                                 D   +  EVVRQL+ IPEL+  +R RL+RI+MRNV+DMKAFL+
Subjt:  --------------------------------------------------------LDERASCAEVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLE

Query:  VPDELKLDYCTIILEEN
        VP+ +K  YC+IIL+EN
Subjt:  VPDELKLDYCTIILEEN

KAA0052026.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-4847.86Show/hide
Query:  MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRFEDYNDGDSI-----------YATTTGD-------------DNHYIK
        MD++CFAILCHLLRT SGL ST++VD+EEMV MFLH+L HDVKN V Q EFMR     DG  I           Y T  G+             D  Y+ 
Subjt:  MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRFEDYNDGDSI-----------YATTTGD-------------DNHYIK

Query:  TSNERSHWRDDLAEEMFSEL--LQVP-----PAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNM
           E S     +  +  S    L+VP       P + WTK+EE+ L+ CLVELV+ GGW+SDN T  LGYL QL RMMA K+PG NI  S TID RIK +
Subjt:  TSNERSHWRDDLAEEMFSEL--LQVP-----PAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNM

Query:  KKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDNLDERASCAEVVRQLQGIPELS
        K+ F +I EM G +CSGF WNDE KCI+ EKE FDN    A+   + +      ELS
Subjt:  KKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDNLDERASCAEVVRQLQGIPELS

TYK19659.1 retrotransposon protein [Cucumis melo var. makuwa]6.8e-4639.37Show/hide
Query:  LAHDVKNRVVQREFMRFEDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHL
        + H     V++R F   ++ ++ DS +ATTT DD HYI+T NE S WRDDLAEEMF++           W +       GCLVELV+ GGW+SDN T   
Subjt:  LAHDVKNRVVQREFMRFEDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHL

Query:  GYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFD---------------------------------
        GYL QL RM A K+PGCNI  S TID RIK MK+ F A+T+M G  CSGF  NDE KCI+AEKE+FD                                 
Subjt:  GYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFD---------------------------------

Query:  -----------------------------------------------------NLDERASCAEVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLEVP
                                                             + D   +  EVVRQL+ IPEL+  +R RL+RI+MRNV+DMKAFL VP
Subjt:  -----------------------------------------------------NLDERASCAEVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLEVP

Query:  DELKLDYCTIILEEN
        D +K  YC+II +EN
Subjt:  DELKLDYCTIILEEN

TrEMBL top hitse value%identityAlignment
A0A5A7SXP3 Retrotransposon protein3.3e-4631.89Show/hide
Query:  MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRF----------------------------------------------
        MD++CFAI+CHLLRT +GL ST+ VDVEEMV MF H+LAHDVKN V+QREFMR                                               
Subjt:  MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRF----------------------------------------------

Query:  -------------------------------------------------------------------------EDYNDGDSIYATTTGDDNHYIKTSNER
                                                                                  D ++ DS +A+TT DD HYI T NE 
Subjt:  -------------------------------------------------------------------------EDYNDGDSIYATTTGDDNHYIKTSNER

Query:  SHWRDDLAEEMFSE------LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQA
        S W D+ AEEMFS+      +      P + WTKEEE++LV CLVELV+  GW+ DN T    YL QL RMMA K+PGCN+  S TID RIK +K+ F A
Subjt:  SHWRDDLAEEMFSE------LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQA

Query:  ITEMHGLSCS--------------------------------------------------------GFNWNDEVKCIIAEKELFDNLDERASCAEVVRQL
        + +MHG +CS                                                           + +E    I E  +    D   +  +VV+QL
Subjt:  ITEMHGLSCS--------------------------------------------------------GFNWNDEVKCIIAEKELFDNLDERASCAEVVRQL

Query:  QGIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDY
        + IPEL+  +R +L+ I+MRNV+DMKAFL++PD +K  Y
Subjt:  QGIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDY

A0A5A7T091 Retrotransposon protein6.0e-4862.34Show/hide
Query:  EDYNDGDSIYATTT-GDDNHYIKTSNERSHWRDDLAEEMFSE--LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKM
        ED ++GDS YATTT  +D  YI+T+NE S WRD+LA  MF++  +     AP ++WT+EEE  LV CL+ELVS GGWKSDN T   GYLAQL RMMAEK+
Subjt:  EDYNDGDSIYATTT-GDDNHYIKTSNERSHWRDDLAEEMFSE--LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKM

Query:  PGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN
        PGC ++ +  IDCRIK +K+TFQAI EM G +CSGF WNDE KCI+AEKELFDN
Subjt:  PGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN

A0A5A7TDD6 Retrotransposon protein8.7e-4737.85Show/hide
Query:  EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSE------LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMA
        ++ ++ DS +ATT  DD HYI+ SNE + WRDDL EEMF++      +      P + WTKEEE+ LV CLVELV+ GGW+ DN T   GYL QL+RMM 
Subjt:  EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSE------LLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMA

Query:  EKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN-------------------------------------------
         K+  CNI  SP  D RIK MK+ F A+ EM G +CSGF WNDE KCI+AEKE+F++                                           
Subjt:  EKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN-------------------------------------------

Query:  --------------------------------------------------------LDERASCAEVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLE
                                                                 D   +  EVVRQL+ IPEL+  +R RL+RI+MRNV+DMKAFL+
Subjt:  --------------------------------------------------------LDERASCAEVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLE

Query:  VPDELKLDYCTIILEEN
        VP+ +K  YC+IIL+EN
Subjt:  VPDELKLDYCTIILEEN

A0A5A7UCU1 Retrotransposon protein7.1e-4947.86Show/hide
Query:  MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRFEDYNDGDSI-----------YATTTGD-------------DNHYIK
        MD++CFAILCHLLRT SGL ST++VD+EEMV MFLH+L HDVKN V Q EFMR     DG  I           Y T  G+             D  Y+ 
Subjt:  MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRFEDYNDGDSI-----------YATTTGD-------------DNHYIK

Query:  TSNERSHWRDDLAEEMFSEL--LQVP-----PAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNM
           E S     +  +  S    L+VP       P + WTK+EE+ L+ CLVELV+ GGW+SDN T  LGYL QL RMMA K+PG NI  S TID RIK +
Subjt:  TSNERSHWRDDLAEEMFSEL--LQVP-----PAPPNIWTKEEESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNM

Query:  KKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDNLDERASCAEVVRQLQGIPELS
        K+ F +I EM G +CSGF WNDE KCI+ EKE FDN    A+   + +      ELS
Subjt:  KKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDNLDERASCAEVVRQLQGIPELS

E5GCB5 Retrotransposon protein1.0e-4735.71Show/hide
Query:  VLAHDVKNRVVQREFMRF---EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDND
        +LA  + + ++ RE   F   ++ ++ DS +ATT  DD HYI+TSNE S WRD+LAEE+ +   ++   P + WTKEEE+ LV CLVELV+ GGW+SDN 
Subjt:  VLAHDVKNRVVQREFMRF---EDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKEEESNLVGCLVELVSTGGWKSDND

Query:  TSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN----------------------------
        T   GYL QL RMMA K+PG NI  S TID RIK MK+ F A+ EM G +CSGF WNDE KCI+AEKE+FD+                            
Subjt:  TSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDN----------------------------

Query:  -------------------------------------------------------LDERASCA-------------------------------------
                                                               + ER + +                                     
Subjt:  -------------------------------------------------------LDERASCA-------------------------------------

Query:  -----------EVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDYCTIILEEN
                   E+VR L+ IPEL+  +R RL+RI+MRNV+DMKAFLEVPD +K  YC++IL+EN
Subjt:  -----------EVVRQLQGIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDYCTIILEEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAAAATGTTTTGCCATACTATGTCACCTACTTAGGACAACTTCTGGATTAGCATCGACGAAAATCGTCGATGTCGAGGAGATGGTCATCATGTTCCTCCACGT
ATTGGCGCACGACGTGAAAAATCGAGTGGTCCAAAGGGAGTTCATGCGGTTTGAGGATTACAACGATGGTGATTCGATATACGCAACAACTACAGGTGACGACAATCACT
ACATCAAAACCTCCAATGAAAGGAGTCACTGGAGGGATGATCTGGCTGAAGAAATGTTCAGTGAATTATTACAAGTTCCTCCCGCGCCCCCAAACATCTGGACGAAAGAG
GAAGAGTCAAACCTGGTCGGGTGCTTGGTGGAGTTGGTCTCTACCGGTGGCTGGAAGTCGGATAACGACACCTCCCATCTTGGATACCTGGCTCAACTACAAAGAATGAT
GGCAGAGAAAATGCCAGGATGTAACATCCAAGGTTCGCCAACAATAGATTGTCGGATAAAAAACATGAAAAAAACATTCCAGGCCATCACAGAAATGCACGGGTTGTCGT
GTAGTGGGTTCAATTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAGGAGTTGTTTGACAATTTAGATGAGCGCGCCTCTTGTGCAGAAGTCGTTAGACAGTTGCAG
GGGATCCCTGAACTGAGTACCCGCAATAGGGTGCGCCTTATACGGATAGTGATGCGCAATGTGAACGACATGAAAGCATTCTTGGAGGTACCAGATGAGCTTAAGTTGGA
CTACTGTACAATCATTCTCGAAGAGAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAAAATGTTTTGCCATACTATGTCACCTACTTAGGACAACTTCTGGATTAGCATCGACGAAAATCGTCGATGTCGAGGAGATGGTCATCATGTTCCTCCACGT
ATTGGCGCACGACGTGAAAAATCGAGTGGTCCAAAGGGAGTTCATGCGGTTTGAGGATTACAACGATGGTGATTCGATATACGCAACAACTACAGGTGACGACAATCACT
ACATCAAAACCTCCAATGAAAGGAGTCACTGGAGGGATGATCTGGCTGAAGAAATGTTCAGTGAATTATTACAAGTTCCTCCCGCGCCCCCAAACATCTGGACGAAAGAG
GAAGAGTCAAACCTGGTCGGGTGCTTGGTGGAGTTGGTCTCTACCGGTGGCTGGAAGTCGGATAACGACACCTCCCATCTTGGATACCTGGCTCAACTACAAAGAATGAT
GGCAGAGAAAATGCCAGGATGTAACATCCAAGGTTCGCCAACAATAGATTGTCGGATAAAAAACATGAAAAAAACATTCCAGGCCATCACAGAAATGCACGGGTTGTCGT
GTAGTGGGTTCAATTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAAGGAGTTGTTTGACAATTTAGATGAGCGCGCCTCTTGTGCAGAAGTCGTTAGACAGTTGCAG
GGGATCCCTGAACTGAGTACCCGCAATAGGGTGCGCCTTATACGGATAGTGATGCGCAATGTGAACGACATGAAAGCATTCTTGGAGGTACCAGATGAGCTTAAGTTGGA
CTACTGTACAATCATTCTCGAAGAGAATGCTTGA
Protein sequenceShow/hide protein sequence
MDKKCFAILCHLLRTTSGLASTKIVDVEEMVIMFLHVLAHDVKNRVVQREFMRFEDYNDGDSIYATTTGDDNHYIKTSNERSHWRDDLAEEMFSELLQVPPAPPNIWTKE
EESNLVGCLVELVSTGGWKSDNDTSHLGYLAQLQRMMAEKMPGCNIQGSPTIDCRIKNMKKTFQAITEMHGLSCSGFNWNDEVKCIIAEKELFDNLDERASCAEVVRQLQ
GIPELSTRNRVRLIRIVMRNVNDMKAFLEVPDELKLDYCTIILEENA