; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015594 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015594
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr04:23480578..23482099
RNA-Seq ExpressionPI0015594
SyntenyPI0015594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]1.6e-7770.78Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        M ENSQNFGNRA ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVC LV HPNDKCP+++E+ N++RKYDP+ NTYN+GWRDN NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA  + SNQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG  PAQPD+ANVSAISLR GKIL+TP + E+KVTS  + L + +E KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGKRDR
        EK+ETN  PS++   K  R
Subjt:  EKLETNSLPSSNNKGKRDR

KAA0032798.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.8e-7670.83Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLV +PNDKCP ++E+ N++R+YDPH NTYN GWRDN NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA  + SNQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKG  PAQPDH NVSAISLR GKIL+TP + E+KVTS  + L + ++ KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGK
        EK+ETN L S++   K
Subjt:  EKLETNSLPSSNNKGK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.7e-7770.83Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        MAENSQ+F NRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLV HPNDKCP+++E+ N++RKYDPH NTYN+GWRDN NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA S+ SNQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG   AQ ++ANVSA+SLR GKIL+TP + E+K TS P+ L   +E KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGK
        EK+ETN  P ++   K
Subjt:  EKLETNSLPSSNNKGK

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.7e-7771.43Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGND
        MA+N Q+FGNRASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +KV KCGVCGLV H N+KCP+++E+ N++R+YDPHSNTYN+GWRDN NLRWGND
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGND

Query:  NQRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKK
        NQ+ +QA S+ SNQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG  PAQ DHANVSAISLR GKIL+TP + E+KVTS P+ L + +E K
Subjt:  NQRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKK

Query:  EEKLETNSLPSSNNKGK
        EEK+ETN  PS++   K
Subjt:  EEKLETNSLPSSNNKGK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.5e-7971.89Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        MAENS++FGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGLV HPNDKCP ++E+ N++R+YDPHSNTYN+GWRDN+NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA S+ SNQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKG  PAQPDHANVSAISLR GKIL+TP + E+K+TS P+ L + +E KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGKR
        EK++  S    N +G R
Subjt:  EKLETNSLPSSNNKGKR

TrEMBL top hitse value%identityAlignment
A0A5A7SQH8 Retrotransposon gag protein8.6e-7770.83Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLV +PNDKCP ++E+ N++R+YDPH NTYN GWRDN NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA  + SNQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKG  PAQPDH NVSAISLR GKIL+TP + E+KVTS  + L + ++ KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGK
        EK+ETN L S++   K
Subjt:  EKLETNSLPSSNNKGK

A0A5A7VQ60 Retrotransposon gag protein1.3e-7771.43Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGND
        MA+N Q+FGNRASE DNSLTKEVSELKSQMLNM TTLLTSFVQG  +KV KCGVCGLV H N+KCP+++E+ N++R+YDPHSNTYN+GWRDN NLRWGND
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGND

Query:  NQRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKK
        NQ+ +QA S+ SNQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG  PAQ DHANVSAISLR GKIL+TP + E+KVTS P+ L + +E K
Subjt:  NQRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKK

Query:  EEKLETNSLPSSNNKGK
        EEK+ETN  PS++   K
Subjt:  EEKLETNSLPSSNNKGK

A0A5D3CB46 Retrotransposon gag protein3.2e-7971.89Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        MAENS++FGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG   KV KCGVCGLV HPNDKCP ++E+ N++R+YDPHSNTYN+GWRDN+NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA S+ SNQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKG  PAQPDHANVSAISLR GKIL+TP + E+K+TS P+ L + +E KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGKR
        EK++  S    N +G R
Subjt:  EKLETNSLPSSNNKGKR

A0A5D3CRR8 Retrotransposon gag protein1.3e-7770.83Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        MAENSQ+F NRASELDNSLTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVCGLV HPNDKCP+++E+ N++RKYDPH NTYN+GWRDN NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA S+ SNQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG   AQ ++ANVSA+SLR GKIL+TP + E+K TS P+ L   +E KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGK
        EK+ETN  P ++   K
Subjt:  EKLETNSLPSSNNKGK

E5GBZ4 Retrotransposon gag protein7.8e-7870.78Show/hide
Query:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN
        M ENSQNFGNRA ELDN LTKEVSELKSQMLNMTTLLTSFVQG  +KV KCGVC LV HPNDKCP+++E+ N++RKYDP+ NTYN+GWRDN NLRWGNDN
Subjt:  MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDN

Query:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE
        Q+ +QA  + SNQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG  PAQPD+ANVSAISLR GKIL+TP + E+KVTS  + L + +E KE
Subjt:  QRPSQATSSLSNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPS-EEKVTSTPILLENNDEKKE

Query:  EKLETNSLPSSNNKGKRDR
        EK+ETN  PS++   K  R
Subjt:  EKLETNSLPSSNNKGKRDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAAATTCCCAGAATTTTGGAAATAGGGCATCCGAGCTGGACAATTCTCTGACTAAGGAAGTAAGTGAACTTAAATCTCAGATGCTTAATATGACTACTCTACT
AACTTCCTTTGTGCAAGGTGGCTCTGTGAAAGTTGCTAAGTGTGGGGTGTGCGGTCTAGTCAGACATCCTAATGACAAATGCCCGGACTTAGTTGAAGAAGCAAATGTCA
TTAGGAAGTACGATCCCCATAGTAATACTTACAATACCGGTTGGAGAGACAACATTAATCTAAGGTGGGGAAACGACAACCAAAGACCTTCACAAGCAACTTCCTCTTTA
AGCAATCAAGGTACAAATTTAGAAGATCTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACAAACGCGATAAG
CAAGCTAGAAGGTAAAGGCATACGTCCGGCTCAGCCAGATCATGCAAACGTAAGTGCCATCTCACTTAGAGGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGG
TAACTTCTACCCCTATCCTTCTAGAAAATAATGATGAGAAAAAGGAAGAAAAATTAGAAACAAATTCTTTACCATCTAGTAACAACAAAGGAAAAAGGGATCGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAAATTCCCAGAATTTTGGAAATAGGGCATCCGAGCTGGACAATTCTCTGACTAAGGAAGTAAGTGAACTTAAATCTCAGATGCTTAATATGACTACTCTACT
AACTTCCTTTGTGCAAGGTGGCTCTGTGAAAGTTGCTAAGTGTGGGGTGTGCGGTCTAGTCAGACATCCTAATGACAAATGCCCGGACTTAGTTGAAGAAGCAAATGTCA
TTAGGAAGTACGATCCCCATAGTAATACTTACAATACCGGTTGGAGAGACAACATTAATCTAAGGTGGGGAAACGACAACCAAAGACCTTCACAAGCAACTTCCTCTTTA
AGCAATCAAGGTACAAATTTAGAAGATCTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACAAACGCGATAAG
CAAGCTAGAAGGTAAAGGCATACGTCCGGCTCAGCCAGATCATGCAAACGTAAGTGCCATCTCACTTAGAGGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGG
TAACTTCTACCCCTATCCTTCTAGAAAATAATGATGAGAAAAAGGAAGAAAAATTAGAAACAAATTCTTTACCATCTAGTAACAACAAAGGAAAAAGGGATCGAGCTTAA
Protein sequenceShow/hide protein sequence
MAENSQNFGNRASELDNSLTKEVSELKSQMLNMTTLLTSFVQGGSVKVAKCGVCGLVRHPNDKCPDLVEEANVIRKYDPHSNTYNTGWRDNINLRWGNDNQRPSQATSSL
SNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGIRPAQPDHANVSAISLRGGKILETPPSEEKVTSTPILLENNDEKKEEKLETNSLPSSNNKGKRDRA