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PI0015597 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015597
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr01:21501188..21510273
RNA-Seq ExpressionPI0015597
SyntenyPI0015597
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]8.7e-5765.29Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T AISK++GKGKLP QPD+ANVS ISLRSGKIL+TP  +E+KV S  + L  +N+ KEE +E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.0e-5765.88Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T  ISK++GKGKL  QPDHANVSVISLRS KIL+TP  +E+KV S P+ L  +N+ KEE  E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.1e-5765.29Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+GH N+KCP+++E+ N++R+YDPH NTYN+GWRDNPNL+W ND Q+  QA S+S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T AISK++GKGKLP Q DHANVS ISLRSGKIL+TP  +E+KV S P+ L  +N+ KEE +E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]6.7e-5764.71Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ +MKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T  ISK++GKGKLP QPDH NVS ISLRSGKIL+TP  +E+KV S  + L  +N+ KEE +E N+SSS+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]3.0e-5765.88Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T  ISK++GKGKL  QPDHANVSVISLRS KIL+TP  +E+KV S P+ L  +N+ KEE  E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032913.2e-5764.71Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ +MKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T  ISK++GKGKLP QPDH NVS ISLRSGKIL+TP  +E+KV S  + L  +N+ KEE +E N+SSS+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

A0A1S4E3R2 uncharacterized protein LOC1079919101.5e-5765.88Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T  ISK++GKGKL  QPDHANVSVISLRS KIL+TP  +E+KV S P+ L  +N+ KEE  E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

A0A5A7VQ60 Retrotransposon gag protein2.5e-5765.29Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+GH N+KCP+++E+ N++R+YDPH NTYN+GWRDNPNL+W ND Q+  QA S+S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T AISK++GKGKLP Q DHANVS ISLRSGKIL+TP  +E+KV S P+ L  +N+ KEE +E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

A0A5D3DCG3 Retrotransposon gag protein1.5e-5765.88Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T  ISK++GKGKL  QPDHANVSVISLRS KIL+TP  +E+KV S P+ L  +N+ KEE  E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

E5GBZ4 Retrotransposon gag protein4.2e-5765.29Show/hide
Query:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL
        G  +K+ KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNL+W ND Q+  QA  +S+NQG+NLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS
        T AISK++GKGKLP QPD+ANVS ISLRSGKIL+TP  +E+KV S  + L  +N+ KEE +E N S S+S
Subjt:  TNAISKLEGKGKLPTQPDHANVSVISLRSGKILETP-PREEKVPSNPILLVDENKKKEENLENNASSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAATTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAAATGGGAAAATGACGCCCAACGACCCGCACAAGCAACTT
CATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAATACAATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCCCAATTGACCAAT
GCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAACTCAGCCTGATCACGCAAATGTAAGTGTCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGGGA
AGAAAAGGTACCTTCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGCCTCTTCTTCTTCTTCTTCAAAAGCATGTCTAGCGC
GTCGGAGTAGCAAAATTAGGTCGTTTTCTCTAAACATGACCACCGTTGATCGAAACTTTTTAAAAATCAGAGTCCTTGATCAATCGCTTGTTTCTTCACCCAATGACAAT
GACATATTAAAGATGAAGCTGGATGAACTTTTTGGTTTTCTACGTACCTTTCAATTAACATTGGATGAGAAACATGATCTGAAAGATAAAGGATTGGCACTGCAAAGTGT
AGCATGTGAAGGACCATTTAACAGTGAAGATAAAGATGCTAATGAAGGTTTAATTGAGTCTCTTATCTTGCTAACCAAACAATTTACAAGAGTTTTAAAACGTCTTAATA
AACGTCCTGCAAATTATGGAACTTCTTTTGCTAGAGATGCTAATGGCTATAACAATGCTAATGTGATGAGGAATTCCTTTCAGCCAAAGGGAAGAAGAGAAAATGACAGA
AATGTTGAGAACTTTCAGAACAAAAATGAACAAATCTACAGATGTTTTGAGCAATTCAAAGGTGTAATTTGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAATTGCAAAATGTGGAGTTTGTGGTCTAATAGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATGCCGGTTGGAGAGACAACCCTAACCTTAAATGGGAAAATGACGCCCAACGACCCGCACAAGCAACTT
CATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAATACAATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCCCAATTGACCAAT
GCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAACTCAGCCTGATCACGCAAATGTAAGTGTCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGGGA
AGAAAAGGTACCTTCTAACCCTATCCTTCTAGTAGATGAAAATAAGAAAAAGGAAGAAAATCTAGAAAACAATGCCTCTTCTTCTTCTTCTTCAAAAGCATGTCTAGCGC
GTCGGAGTAGCAAAATTAGGTCGTTTTCTCTAAACATGACCACCGTTGATCGAAACTTTTTAAAAATCAGAGTCCTTGATCAATCGCTTGTTTCTTCACCCAATGACAAT
GACATATTAAAGATGAAGCTGGATGAACTTTTTGGTTTTCTACGTACCTTTCAATTAACATTGGATGAGAAACATGATCTGAAAGATAAAGGATTGGCACTGCAAAGTGT
AGCATGTGAAGGACCATTTAACAGTGAAGATAAAGATGCTAATGAAGGTTTAATTGAGTCTCTTATCTTGCTAACCAAACAATTTACAAGAGTTTTAAAACGTCTTAATA
AACGTCCTGCAAATTATGGAACTTCTTTTGCTAGAGATGCTAATGGCTATAACAATGCTAATGTGATGAGGAATTCCTTTCAGCCAAAGGGAAGAAGAGAAAATGACAGA
AATGTTGAGAACTTTCAGAACAAAAATGAACAAATCTACAGATGTTTTGAGCAATTCAAAGGTGTAATTTGGAGTTGA
Protein sequenceShow/hide protein sequence
MAPLPGSDGGNVKIAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLKWENDAQRPAQATSSSNNQGSNLEDLVKALATNTISFQNEMKQQMSQLTN
AISKLEGKGKLPTQPDHANVSVISLRSGKILETPPREEKVPSNPILLVDENKKKEENLENNASSSSSSKACLARRSSKIRSFSLNMTTVDRNFLKIRVLDQSLVSSPNDN
DILKMKLDELFGFLRTFQLTLDEKHDLKDKGLALQSVACEGPFNSEDKDANEGLIESLILLTKQFTRVLKRLNKRPANYGTSFARDANGYNNANVMRNSFQPKGRRENDR
NVENFQNKNEQIYRCFEQFKGVIWS