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PI0015602 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015602
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr04:17187719..17188039
RNA-Seq ExpressionPI0015602
SyntenyPI0015602
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034827.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-3063.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T+     S   + +G  +K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

KAA0039128.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-3063.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T      S   + +G ++K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

KAA0040539.1 uncharacterized protein E6C27_scaffold262G00930 [Cucumis melo var. makuwa]1.6e-3063.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T+     S   + +G  +K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

TYK02434.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-3063.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL  +ELG+ +     S   + +G  EK    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

XP_008448087.1 PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo]5.5e-3163.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T+     S   + +G ++K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

TrEMBL top hitse value%identityAlignment
A0A1S3BJT6 uncharacterized protein LOC1034903752.6e-3163.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T+     S   + +G ++K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

A0A5A7SZS5 Ty3-gypsy retrotransposon protein7.7e-3163.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T+     S   + +G  +K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

A0A5A7T8C0 Ty3/gypsy retrotransposon protein5.9e-3163.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T      S   + +G ++K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

A0A5A7TH07 Uncharacterized protein7.7e-3163.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL+ +ELG+T+     S   + +G  +K    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

A0A5D3BTE3 Retrotransposon protein1.0e-3063.21Show/hide
Query:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC
        MREAQLVND NLALKL  +ELG+ +     S   + +G  EK    + +FQMK +TIPIKGN+ +GEPP+KRLSD EF  RLD+GLCFRCNDKYSPGHRC
Subjt:  MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRC

Query:  KVREKR
        K +EKR
Subjt:  KVREKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAGGCACAACTGGTTAATGACATGAACTTGGCACTGAAATTGGCCACAATTGAGTTGGGTATAACAAAAATGAGTAGTCCGACGAGCCAAACCTCTAGAAATGT
GGGGGGAATAGAAAAGGGAATTACCAACAGACCAGAATTTCAAATGAAACATGTAACCATTCCTATCAAAGGCAACTATGGAAGAGGGGAACCACCGTTGAAGAGGCTAT
CTGATAATGAATTCTGTGACAGACTGGACAAGGGCTTATGCTTTAGATGTAATGACAAATACTCACCGGGGCATCGTTGTAAAGTGAGGGAAAAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAGGCACAACTGGTTAATGACATGAACTTGGCACTGAAATTGGCCACAATTGAGTTGGGTATAACAAAAATGAGTAGTCCGACGAGCCAAACCTCTAGAAATGT
GGGGGGAATAGAAAAGGGAATTACCAACAGACCAGAATTTCAAATGAAACATGTAACCATTCCTATCAAAGGCAACTATGGAAGAGGGGAACCACCGTTGAAGAGGCTAT
CTGATAATGAATTCTGTGACAGACTGGACAAGGGCTTATGCTTTAGATGTAATGACAAATACTCACCGGGGCATCGTTGTAAAGTGAGGGAAAAAAGATAG
Protein sequenceShow/hide protein sequence
MREAQLVNDMNLALKLATIELGITKMSSPTSQTSRNVGGIEKGITNRPEFQMKHVTIPIKGNYGRGEPPLKRLSDNEFCDRLDKGLCFRCNDKYSPGHRCKVREKR