; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015630 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015630
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationchr01:506602..510597
RNA-Seq ExpressionPI0015630
SyntenyPI0015630
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]2.6e-8674.29Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS VS PLADRQSPMP  S+TTDST FNSESHSSSITVDGSKRFLDSHH LQLDAEQTHWTDEKHR YLDSLE SFVQGL+Q RRMHA SSKQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC
        MRRKPI  DTSSSE+         + +I                       H  S  KQCSLETPDLLEECGSCSD RHIR+MTNSCGSARNSQQT PCC
Subjt:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC

Query:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQ
         NSYTIITEVSDQNFVDNQPGELSGGM  AKRLKKASS F  NAQ
Subjt:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQ

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]1.9e-8171.14Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS +S PLADRQSPMP  SATTDST FNSESHSSSIT+DGSK F DSHH  QLDAEQTHWTDEKHRLYLDSLE SFVQ L+Q R MHA S KQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC
        MRRKPI PD SSSE+         + +I                       H  S  KQCSLETPDLLEEC SCSD RHIR MTNSC SARNSQ T PCC
Subjt:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC

Query:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV
         NSYTIITEVSDQNFVDNQPGELS GM IAKRLKKASSDFS +AQV
Subjt:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]8.8e-8774.39Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS VS PLADRQSPMP  S+TTDST FNSESHSSSITVDGSKRFLDSHH LQLDAEQTHWTDEKHR YLDSLE SFVQGL+Q RRMHA SSKQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC
        MRRKPI  DTSSSE+         + +I                       H  S  KQCSLETPDLLEECGSCSD RHIR+MTNSCGSARNSQQT PCC
Subjt:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC

Query:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV
         NSYTIITEVSDQNFVDNQPGELSGGM  AKRLKKASS F  NAQV
Subjt:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV

XP_008454953.1 PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo]2.2e-9889.25Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS VS PLADRQSPMP  S+TTDST FNSESHSSSITVDGSKRFLDSHH LQLDAEQTHWTDEKHR YLDSLE SFVQGL+Q RRMHA SSKQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKR
        MRRKPI  DTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSD RHIR+MTNSCGSARNSQQT PCC NSYTIITEVSDQNFVDNQPGELSGGM  AKR
Subjt:  MRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKR

Query:  LKKASSDFSGNAQV
        LKKASS F  NAQV
Subjt:  LKKASSDFSGNAQV

XP_011658902.1 cold-regulated protein 28 isoform X2 [Cucumis sativus]4.8e-9385.51Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS +S PLADRQSPMP  SATTDST FNSESHSSSIT+DGSK F DSHH  QLDAEQTHWTDEKHRLYLDSLE SFVQ L+Q R MHA S KQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKR
        MRRKPI PD SSSEVRQHIHKKSGRKQCSLETPDLLEEC SCSD RHIR MTNSC SARNSQ T PCC NSYTIITEVSDQNFVDNQPGELS GM IAKR
Subjt:  MRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKR

Query:  LKKASSDFSGNAQV
        LKKASSDFS +AQV
Subjt:  LKKASSDFSGNAQV

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein9.2e-8271.14Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS +S PLADRQSPMP  SATTDST FNSESHSSSIT+DGSK F DSHH  QLDAEQTHWTDEKHRLYLDSLE SFVQ L+Q R MHA S KQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC
        MRRKPI PD SSSE+         + +I                       H  S  KQCSLETPDLLEEC SCSD RHIR MTNSC SARNSQ T PCC
Subjt:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC

Query:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV
         NSYTIITEVSDQNFVDNQPGELS GM IAKRLKKASSDFS +AQV
Subjt:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV

A0A1S3BZQ8 uncharacterized protein LOC103495241 isoform X21.1e-9889.25Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS VS PLADRQSPMP  S+TTDST FNSESHSSSITVDGSKRFLDSHH LQLDAEQTHWTDEKHR YLDSLE SFVQGL+Q RRMHA SSKQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKR
        MRRKPI  DTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSD RHIR+MTNSCGSARNSQQT PCC NSYTIITEVSDQNFVDNQPGELSGGM  AKR
Subjt:  MRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKR

Query:  LKKASSDFSGNAQV
        LKKASS F  NAQV
Subjt:  LKKASSDFSGNAQV

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X14.3e-8774.39Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS VS PLADRQSPMP  S+TTDST FNSESHSSSITVDGSKRFLDSHH LQLDAEQTHWTDEKHR YLDSLE SFVQGL+Q RRMHA SSKQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC
        MRRKPI  DTSSSE+         + +I                       H  S  KQCSLETPDLLEECGSCSD RHIR+MTNSCGSARNSQQT PCC
Subjt:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC

Query:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV
         NSYTIITEVSDQNFVDNQPGELSGGM  AKRLKKASS F  NAQV
Subjt:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQV

A0A5D3C4A3 Cold regulated protein 27, putative isoform 21.2e-8674.29Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK
        MGDSHTPS VS PLADRQSPMP  S+TTDST FNSESHSSSITVDGSKRFLDSHH LQLDAEQTHWTDEKHR YLDSLE SFVQGL+Q RRMHA SSKQK
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQK

Query:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC
        MRRKPI  DTSSSE+         + +I                       H  S  KQCSLETPDLLEECGSCSD RHIR+MTNSCGSARNSQQT PCC
Subjt:  MRRKPITPDTSSSEV---------RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCC

Query:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQ
         NSYTIITEVSDQNFVDNQPGELSGGM  AKRLKKASS F  NAQ
Subjt:  RNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQ

A0A6J1GJF7 uncharacterized protein LOC111454842 isoform X33.2e-7467.98Show/hide
Query:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSK---RFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSS
        M D+HTPSS+S P+ADR+SPM    + +D TR NSES+SSS TVD S+     + SHH  QLDA QTHWT+EKHRL+LDSLE SFVQ L++ R + A SS
Subjt:  MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSK---RFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSS

Query:  KQKMRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHI
        KQKMRRKPI P+ SSSEVRQ+IH KSGR QC+LET D+LEECGSCSD  HIRN TNS  SAR+SQQ  PCCR+S+TI+TEVSDQNFVD  PGELS G  I
Subjt:  KQKMRRKPITPDTSSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHI

Query:  AKRLKKASSDFSGNAQVNLGTTLDFSLE
         KRLKKASSD SGN +V LG  +DFSLE
Subjt:  AKRLKKASSDFSGNAQVNLGTTLDFSLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACTCTCATACGCCCTCGTCTGTCTCGCTGCCGCTTGCAGATCGACAATCACCCATGCCGGCGCCCTCTGCTACTACCGACTCCACTCGCTTCAACTCTGAATC
CCACTCTTCTTCCATTACTGTTGATGGTTCCAAGCGTTTTTTGGATTCTCATCATTCTTTGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTAT
ATCTTGATTCTTTAGAAACATCTTTTGTCCAAGGTTTGAATCAACGTAGGCGTATGCATGCTTGGTCCTCAAAACAGAAGATGCGTCGGAAGCCGATCACGCCTGATACA
TCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGAAAACAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAGTTGTAGTGATATGAGACA
CATAAGAAACATGACGAACTCCTGTGGATCTGCCAGAAATTCACAGCAGACCCATCCATGCTGTCGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTG
TGGATAATCAACCAGGAGAGTTGTCTGGTGGCATGCATATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCTGGCAATGCCCAGGTTAATCTTGGGACTACCTTA
GATTTTTCTTTGGAAATCTTATAA
mRNA sequenceShow/hide mRNA sequence
CACCGCTTCTCTCTCTCTCTCTCTCTTCATTTCTCCACGAGCTTGAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCAATTTTTTCTTTGATTTCATCC
TCCATTTTTGGCTCTTCCGAATCATTTCTCCTTGTTTTTGATCCCTCCGAAATGGGTGACTCTCATACGCCCTCGTCTGTCTCGCTGCCGCTTGCAGATCGACAATCACC
CATGCCGGCGCCCTCTGCTACTACCGACTCCACTCGCTTCAACTCTGAATCCCACTCTTCTTCCATTACTGTTGATGGTTCCAAGCGTTTTTTGGATTCTCATCATTCTT
TGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTATATCTTGATTCTTTAGAAACATCTTTTGTCCAAGGTTTGAATCAACGTAGGCGTATGCAT
GCTTGGTCCTCAAAACAGAAGATGCGTCGGAAGCCGATCACGCCTGATACATCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGAAAACAGTGTAGTTT
GGAAACTCCTGATCTCCTTGAAGAATGTGGAAGTTGTAGTGATATGAGACACATAAGAAACATGACGAACTCCTGTGGATCTGCCAGAAATTCACAGCAGACCCATCCAT
GCTGTCGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTGGTGGCATGCATATTGCAAAAAGATTAAAGAAA
GCTTCTTCTGATTTTTCTGGCAATGCCCAGGTTAATCTTGGGACTACCTTAGATTTTTCTTTGGAAATCTTATAATTTCATCGTATAAATGATTTGAGACTGAATATGCT
GCTATTGATCTCTTAGGTTGTACCATTTAAAAGATTATCCTAAAAAGAATCAAAAGCCAGATGGCATATTGTCTTCAGCGCATCCTCAAAACTTTGTACCTCCAAATTCA
GATTTGTGTTGCTGTGTAAGAGGGAGCTGACAACAATTCATTCCAACATGTGAAAATACCTGGCTGTTCAAGCTCATTAACCAAATGCGACACGGTTTTGTTTTCTTTTC
AGAAGAGCATTGTAAAGAAAGTAAGGGAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGGAGGGAGAAAATATGTTTGTTTATAGTACAAACTAAACTTTTTCC
TAGTTCAAATATTGAGTGAAATATATGTTAACCCTTTCTTTTCTCCTGTTTTCCTGTTTCTTAGAGTTTAAAAAGATGGAAATTCTACAACTAGATGTAGGGTAAGAATA
TACATGCTATAGAGAAGCTAGACACCCTGATAGTGAGATAGGTACACACCCTTTTAAATTTGTTTGAAATACTTTCATTATTAAGTTTTGTTAGCAACCTCAAGTGTAAA
TCATTTATATAAATCAAAAAATGTCATTCTTTTGTGACACTGAAAGAGAATTGAGCAAACTTATTGATTTTCTTTATGGGGTAAAGTTTTTTTAGTTGTA
Protein sequenceShow/hide protein sequence
MGDSHTPSSVSLPLADRQSPMPAPSATTDSTRFNSESHSSSITVDGSKRFLDSHHSLQLDAEQTHWTDEKHRLYLDSLETSFVQGLNQRRRMHAWSSKQKMRRKPITPDT
SSSEVRQHIHKKSGRKQCSLETPDLLEECGSCSDMRHIRNMTNSCGSARNSQQTHPCCRNSYTIITEVSDQNFVDNQPGELSGGMHIAKRLKKASSDFSGNAQVNLGTTL
DFSLEIL