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PI0015639 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015639
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:17935492..17937136
RNA-Seq ExpressionPI0015639
SyntenyPI0015639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-5270.92Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRWGN+NQ+ TQA S+++NQG NLED++KALA+NT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        T AISK++GKGKL AQ ++ANVSA+SLRSGKIL  P ++EK
Subjt:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.3e-5370.92Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQG NLED++KALA+NT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        T  ISK++GKGKLLAQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

KAA0053321.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.3e-5372.46Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNA
        +KV KCGVCGL+GHPNDKCP+++E+ N++R+YDP+ NTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQG NLED++KALA+NT+SFQ EMKQQM+QLT A
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNA

Query:  ISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        ISK++GKGKLLAQ DHANVSAISLRSGKIL  P ++EK
Subjt:  ISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.8e-5272.99Show/hide
Query:  KVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNAI
        KV KCGVCGL+GHPNDKCP ++E+ N++R+YDPH NTYN+GWRDN NLRWGN+NQ+ TQA S+++NQG NLED++KALA+NT+SFQ +MKQQM+QLT AI
Subjt:  KVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNAI

Query:  SKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        SK++GKGKL AQPDHANVSAISLRSGKIL  P ++EK
Subjt:  SKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]7.3e-5370.92Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQG NLED++KALA+NT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        T  ISK++GKGKLLAQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919103.5e-5370.92Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQG NLED++KALA+NT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        T  ISK++GKGKLLAQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

A0A5A7UID2 Retrotransposon gag protein2.1e-5372.46Show/hide
Query:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNA
        +KV KCGVCGL+GHPNDKCP+++E+ N++R+YDP+ NTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQG NLED++KALA+NT+SFQ EMKQQM+QLT A
Subjt:  VKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNA

Query:  ISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        ISK++GKGKLLAQ DHANVSAISLRSGKIL  P ++EK
Subjt:  ISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

A0A5D3CB46 Retrotransposon gag protein1.3e-5272.99Show/hide
Query:  KVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNAI
        KV KCGVCGL+GHPNDKCP ++E+ N++R+YDPH NTYN+GWRDN NLRWGN+NQ+ TQA S+++NQG NLED++KALA+NT+SFQ +MKQQM+QLT AI
Subjt:  KVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTNAI

Query:  SKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        SK++GKGKL AQPDHANVSAISLRSGKIL  P ++EK
Subjt:  SKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

A0A5D3CRR8 Retrotransposon gag protein6.0e-5370.92Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRWGN+NQ+ TQA S+++NQG NLED++KALA+NT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        T AISK++GKGKL AQ ++ANVSA+SLRSGKIL  P ++EK
Subjt:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

A0A5D3DCG3 Retrotransposon gag protein3.5e-5370.92Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPH NTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQG NLED++KALA+NT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK
        T  ISK++GKGKLLAQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATAGAAACACTTACAATGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAATAATAATCAACAACCCACACAAGCAACTT
CTTCTGCAAACAACCAAGGTAATAATTTGGAGGACTTGGTAAAAGCTCTTGCTTCTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAAT
GCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCTAGCTCAGCCTGATCACGCAAACGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGA
AGAAAAGATTAGTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATAGAAACACTTACAATGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAATAATAATCAACAACCCACACAAGCAACTT
CTTCTGCAAACAACCAAGGTAATAATTTGGAGGACTTGGTAAAAGCTCTTGCTTCTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAAT
GCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCTAGCTCAGCCTGATCACGCAAACGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCCAAGTGA
AGAAAAGATTAGTTCCTAA
Protein sequenceShow/hide protein sequence
MVPLPGSDGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHRNTYNAGWRDNPNLRWGNNNQQPTQATSSANNQGNNLEDLVKALASNTISFQNEMKQQMSQLTN
AISKLEGKGKLLAQPDHANVSAISLRSGKILQPPPSEEKISS