CuGenDBv2

Gene ID	PI0015644
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	RNA-binding protein 28
Genome location	chr01:5895070..5896175
RNA-Seq Expression	PI0015644
Synteny	PI0015644
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033793.1 RNA-binding protein 28 [Cucumis melo var. makuwa]

1.1e-134

91.35

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKELHKLCIEAVTSRATKQKP+IRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS DN+TANVPKAR +ND SDT  RD+HSNKNNSRKRKAIGDN  VKAQNH EDENDNHVSNDVMQESRA+KKRKTRPDIGNTNESQKQKPEGR  MP+K
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMDSEKIEVSQ+AD Q KKKVKHQ+EQQQ+KRP KNKEPIGRDIVDKLDVLIEQYQSKFL+QRSDR DSEKKGSKQVRRWFQS
Subjt:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

XP_004148553.1 RNA-binding protein 28 [Cucumis sativus]

1.8e-132

90.34

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKELHKLCIEAVTSRATKQKP+IRQIKFLKDVKKGKMLTKNHSCGVAF+EFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS DNN AN+PKARQ+ DDSDTN RDIHSN+NNSRKRKAIG+N  VKAQN NEDENDNHVSN+VMQ++R +KKRKTRPD GNTNESQKQKP GRSSMPEK
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSE-KIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMDSE KIEVSQ+ADVQHKKKVKHQVEQQQ+KRPKKNKEPIGRDIVDKLDVLIEQYQSKFL+QRSDR D EKKG+KQVRRWFQS
Subjt:  SSKRSASMDSE-KIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

XP_008448076.1 PREDICTED: RNA-binding protein 28 [Cucumis melo]

2.1e-133

90.66

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Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKELHKLCIEAVTSRATKQKP+IRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS DN+TANVPKAR +ND SDT  RD+HSNKNNSRKRKAI DN  VKAQNH EDENDNHVSNDVMQESRA+KKRKTRPDIGNTNESQKQKPEGR  +P+K
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMDSEKIEVSQ+AD Q KKKVKHQ+EQQQ+KRP KNKEPIGRDIVDKLDVLIEQYQSKFL+QRSDR DSEKKGSKQVRRWFQS
Subjt:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

XP_022975201.1 RNA-binding protein 28 isoform X2 [Cucurbita maxima]

3.8e-111

79.31

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Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKEL KLCIEAVTSRATKQKP+IRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEFA+DNVQ LKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDV-MQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPE
         S+ +NTANVPKA  +N  +DTN  DIHSNK NSRKRKA GDNRPVK +N NE++N +HVSND+ M+ESRA+KKRKTRP+ GN NESQKQKPEGR SMPE
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDV-MQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPE

Query:  KSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        K SKRSA MD+ K + SQ+ADVQHKKK KHQVEQQQ+KR KKNK P+G+D VDKLD LIEQY+SKF ++ SD AD EKKGSKQVRRWFQS
Subjt:  KSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

XP_038888249.1 RNA-binding protein 28 [Benincasa hispida]

1.8e-121

85.12

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Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKEL KLCIEAVTSRATKQKP+IRQIKFLKDVKKGK+LTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGP NRPIVEFAIDN+QTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS D NTANVPKA+Q N ++DTN  DIHSN+ NSRKRKAIGDNRPVKAQNHN+D+NDNHVSNDVM ESRA+KKRKTRP+IGNTNES KQKP G+  MPEK
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMD  KI+ SQ++DVQH KKVKH+V +QQ+KRPKKNKEPIGRD+VDKLDVLIEQYQSKF +QRSDR D EKKGSKQVRRWFQS
Subjt:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5P3 Uncharacterized protein

8.6e-133

90.34

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKELHKLCIEAVTSRATKQKP+IRQIKFLKDVKKGKMLTKNHSCGVAF+EFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS DNN AN+PKARQ+ DDSDTN RDIHSN+NNSRKRKAIG+N  VKAQN NEDENDNHVSN+VMQ++R +KKRKTRPD GNTNESQKQKP GRSSMPEK
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSE-KIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMDSE KIEVSQ+ADVQHKKKVKHQVEQQQ+KRPKKNKEPIGRDIVDKLDVLIEQYQSKFL+QRSDR D EKKG+KQVRRWFQS
Subjt:  SSKRSASMDSE-KIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

A0A1S3BIA6 RNA-binding protein 28

1.0e-133

90.66

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKELHKLCIEAVTSRATKQKP+IRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS DN+TANVPKAR +ND SDT  RD+HSNKNNSRKRKAI DN  VKAQNH EDENDNHVSNDVMQESRA+KKRKTRPDIGNTNESQKQKPEGR  +P+K
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMDSEKIEVSQ+AD Q KKKVKHQ+EQQQ+KRP KNKEPIGRDIVDKLDVLIEQYQSKFL+QRSDR DSEKKGSKQVRRWFQS
Subjt:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

A0A5A7STH1 RNA-binding protein 28

5.4e-135

91.35

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKELHKLCIEAVTSRATKQKP+IRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK
        WS DN+TANVPKAR +ND SDT  RD+HSNKNNSRKRKAIGDN  VKAQNH EDENDNHVSNDVMQESRA+KKRKTRPDIGNTNESQKQKPEGR  MP+K
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEK

Query:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        SSKR ASMDSEKIEVSQ+AD Q KKKVKHQ+EQQQ+KRP KNKEPIGRDIVDKLDVLIEQYQSKFL+QRSDR DSEKKGSKQVRRWFQS
Subjt:  SSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

A0A6J1IDH9 RNA-binding protein 28 isoform X2

1.9e-111

79.31

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKEL KLCIEAVTSRATKQKP+IRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEFA+DNVQ LKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDV-MQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPE
         S+ +NTANVPKA  +N  +DTN  DIHSNK NSRKRKA GDNRPVK +N NE++N +HVSND+ M+ESRA+KKRKTRP+ GN NESQKQKPEGR SMPE
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDV-MQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPE

Query:  KSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        K SKRSA MD+ K + SQ+ADVQHKKK KHQVEQQQ+KR KKNK P+G+D VDKLD LIEQY+SKF ++ SD AD EKKGSKQVRRWFQS
Subjt:  KSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

A0A6J1IG31 RNA-binding protein 28 isoform X1

4.6e-110

79.04

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        MKEKEL KLCIEAVTSRATKQKP+IRQIKFLKDVKKGK+LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIVEFA+DNVQ LKLRKAKLQA
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDV-MQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPE
         S+ +NTANVPKA  +N  +DTN  DIHSNK NSRKRKA GDNRPVK +N NE++N +HVSND+ M+ESRA+KKRKTRP+ GN NESQKQKPEGR SMPE
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDV-MQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPE

Query:  KSSKRSASMDSEKIEVSQQADVQHKKKVKHQVE-QQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        K SKRSA MD+ K + SQ+ADVQHKKK KHQVE QQQ+KR KKNK P+G+D VDKLD LIEQY+SKF ++ SD AD EKKGSKQVRRWFQS
Subjt:  KSSKRSASMDSEKIEVSQQADVQHKKKVKHQVE-QQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

SwissProt top hits

e value

%identity

Alignment

Q8CGC6 RNA-binding protein 28

1.3e-05

27.46

Show/hide

Query:  EKELHKLCIEAVTSRATKQKPLIRQIKFLKDVK--KGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        +K+L KL +EA      ++   I++ + ++D+K   GKM  K  S G AF EF +HEHAL ALR  NNNPE FG   RPIVEF++++ + LK+++ ++Q 
Subjt:  EKELHKLCIEAVTSRATKQKPLIRQIKFLKDVK--KGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANV---PKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGR-SS
              +  V   P+  Q+    D   + + S   +  + KA G+ +  KA + +          + ++    KK+RK      +     + + +G+  S
Subjt:  WSHDNNTANV---PKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGR-SS

Query:  MPEKSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRR--WFQS
        +P +  K             Q    + KK+      Q  K++ K+NK         + + L+EQY+ K L           KG+  ++R  WF S
Subjt:  MPEKSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRR--WFQS

Q9NW13 RNA-binding protein 28

3.4e-09

25.91

Show/hide

Query:  EKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQAWS
        +K+L KL + A +    ++   I++ + ++D+K      K  S G AF EF EHEHAL ALR++NNNPE FGP+ RPIVEF++++ + LK+++ ++Q   
Subjt:  EKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQAWS

Query:  HDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEKSS
              ++ K R +    +         K+  +K           AQ+H E            ++S+   ++K +    +    Q +    +  +P+   
Subjt:  HDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEKSS

Query:  KRSA----SMDSEKIEVSQQADVQ--HKKKVKHQVEQQQKKRPKKNKEPI------GRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRR--WFQ
        +R      S    KI +  +  V+  H KK K Q+ Q ++++ + + E +      G     + + L+EQY+ K L           KG+   +R  WF 
Subjt:  KRSA----SMDSEKIEVSQQADVQ--HKKKVKHQVEQQQKKRPKKNKEPI------GRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRR--WFQ

Query:  S
        S
Subjt:  S

Arabidopsis top hits

e value

%identity

Alignment

AT2G21440.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.5e-41

40.54

Show/hide

Query:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA
        M  K+L++L ++AVTSRATKQKP IRQIKFL++ KKGK+ TKN+S GVAFVEF+EHEHALVALRVLNNNPETFGP +RP++EFA+DNVQ LK+R+AK Q 
Subjt:  MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQA

Query:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQN-------HNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEG
        +          + +    D      +  +  N  +++   GDN   + +N         E+  +   SN  ++++ A+KKR  R     T E      +G
Subjt:  WSHDNNTANVPKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQN-------HNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEG

Query:  RSSMPEKSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS
        +    ++++++     S+  ++S+    +  +    +    Q+KR K+ +   G ++VDKLD+LIE+Y+SKF  Q S +   +K+ S QVRRWF+S
Subjt:  RSSMPEKSSKRSASMDSEKIEVSQQADVQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAGAAAAAGAACTTCACAAACTTTGCATTGAAGCTGTTACCTCTCGAGCTACAAAGCAAAAACCCTTGATTCGCCAGATTAAATTCTTAAAGGATGTTAAGAAAGG
AAAGATGCTGACAAAAAATCACTCATGTGGAGTTGCTTTTGTCGAGTTTTCTGAGCATGAGCATGCCCTTGTAGCCTTGCGAGTTCTCAACAACAATCCAGAAACTTTTG
GGCCTATAAATCGCCCAATTGTGGAGTTTGCTATTGACAACGTTCAAACGTTGAAGCTGCGAAAAGCCAAGTTACAAGCTTGGTCGCACGACAATAATACTGCCAATGTT
CCCAAAGCAAGGCAGCAAAACGATGATTCTGATACAAATACTAGGGATATCCATTCAAACAAGAACAATTCCAGAAAAAGGAAAGCAATAGGCGATAATCGTCCGGTGAA
GGCACAGAATCATAACGAAGATGAAAATGACAATCATGTATCTAATGATGTGATGCAAGAAAGTAGAGCTAAAAAAAAGAGGAAAACACGTCCAGATATTGGTAATACAA
ACGAATCGCAGAAACAAAAACCAGAAGGACGAAGTTCGATGCCTGAAAAATCAAGCAAGAGATCGGCATCCATGGATTCTGAAAAAATAGAAGTTTCCCAGCAAGCTGAT
GTACAACACAAAAAGAAGGTAAAACATCAAGTAGAGCAGCAGCAGAAGAAGAGGCCAAAGAAAAACAAGGAACCAATAGGACGGGATATTGTAGATAAACTCGACGTGCT
TATCGAACAATATCAGTCCAAGTTTTTGAAGCAAAGGTCAGACCGAGCAGATAGTGAAAAGAAAGGGTCTAAACAGGTTAGAAGATGGTTCCAATCATAA

mRNA sequence

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Protein sequence

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MKEKELHKLCIEAVTSRATKQKPLIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIVEFAIDNVQTLKLRKAKLQAWSHDNNTANV
PKARQQNDDSDTNTRDIHSNKNNSRKRKAIGDNRPVKAQNHNEDENDNHVSNDVMQESRAKKKRKTRPDIGNTNESQKQKPEGRSSMPEKSSKRSASMDSEKIEVSQQAD
VQHKKKVKHQVEQQQKKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLKQRSDRADSEKKGSKQVRRWFQS

PI0015644 (gene) of Melon (PI 482460) v1 genome