CuGenDBv2

Gene ID	PI0015645
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	40S ribosomal protein S3a
Genome location	chr05:19221199..19224421
RNA-Seq Expression	PI0015645
Synteny	PI0015645
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004153483.1 40S ribosomal protein S3a [Cucumis sativus]

1.6e-140

99.23

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

XP_008449325.1 PREDICTED: 40S ribosomal protein S3a-like [Cucumis melo]

2.1e-140

98.85

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

XP_022138569.1 40S ribosomal protein S3a [Momordica charantia]

5.1e-139

98.08

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

XP_022959011.1 40S ribosomal protein S3a-like [Cucurbita moschata]

1.5e-138

98.08

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVF VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

XP_023006746.1 40S ribosomal protein S3a-like [Cucurbita maxima]

3.0e-139

98.46

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVF VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLN9 40S ribosomal protein S3a

7.7e-141

99.23

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

A0A1S3BMP7 40S ribosomal protein S3a

1.0e-140

98.85

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

A0A5A7UQR0 40S ribosomal protein S3a

1.0e-140

98.85

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

A0A6J1CAG4 40S ribosomal protein S3a

2.5e-139

98.08

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

A0A6J1KYM2 40S ribosomal protein S3a

1.4e-139

98.46

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVF VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEE VEGATEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

1.1e-128

88.51

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG++IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPV-EGATEVVGA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPA+EPV EG TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPV-EGATEVVGA

P33444 40S ribosomal protein S3a

3.6e-127

86.97

Show/hide

Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG++IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPAEE V   TEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPAEEPVEGATEVVGA

P49198 40S ribosomal protein S3a

5.5e-128

87.31

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG++IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA
        TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPAEE    ATEV+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

Q8GTE3 40S ribosomal protein S3a

6.5e-129

89.66

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGK+IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEP-VEGATEVVGA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PA+E  VEG  E+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEP-VEGATEVVGA

Q9MBB3 40S ribosomal protein S3a

1.3e-124

87.74

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKK  DPFAKKDWYDIKAP+VF  KNVGKTLV+RTQGTKIASEGLKHRVFEV LADLQ DE+ AYRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG++IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEP-VEGATEVVGA
        TSSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RP EE  VEG TEVVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEP-VEGATEVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

6.5e-124

84.73

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE+IG++IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPAEE-PVEGATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPA+E  VE  TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPAEE-PVEGATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

4.9e-124

85.5

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Query:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKK VDPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE+IG++IEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPAEEP-VEGATEVVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPA+E  VE  TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPAEEP-VEGATEVVGA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTGTCGGAAAAAACAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAACTGTCGACCCATTTGCAAAGAAGGATTGGTATGATATCAAGGCACCCTCTGT
GTTCACTGTCAAGAACGTTGGAAAGACTCTTGTTACCCGTACTCAGGGTACCAAGATTGCTTCTGAAGGGCTTAAACATAGAGTGTTTGAGGTATCACTGGCCGACCTTC
AGGATGATGAAGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAATGTTCTGACTAATTTCTGGGGAATGAATTTCACTACAGACAAGTTA
AGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCCCATGTAGATGTTAAGACCACAGATAATTACACTCTGAGGATGTTTTGCATTGGGTTTACAAAGAGACGTCC
AAACCAAGTCAAAAGGACCTGCTATGCACAATCCAGTCAGATCAGACAGATTCGTCGCAAGATGAGGGAGATAATGGTCAACCAAGCAACATCATGCGATCTGAAAGAGT
TGGTCCGTAAGTTCATTCCTGAATCAATTGGAAAGGATATCGAGAAGGCTACTTCTAGCATATACCCTCTACAGAATGTTTTCATCCGGAAGGTCAAGATCTTGAAAGCT
CCCAAGTTTGATCTCGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTCAAGGTAGACAGGCCTGCTGAAGAACCCGTTGAGGGTGCTACAGAAGT
TGTCGGTGCTTGA

mRNA sequence

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CGCAATATCACACAAAGAAAAAAGGAAAACAAAGAAAGAAAGACAAAGAAAAACAGAGAAAAAAATTACCTAATTTCTTCGCGAATTTTTTCAATAAAAAAAAAAAGGAA
AAAGAAAAGGAAAAAACCGAGGACTATTTAAAGAGAGCTTATTAGGGTTTTCGGGACAGCCGTTTCTCTCTCGCTGGTTTTTCATCCTCTGGAGCTGCTCCAAGCTTCTC
AACTACTCCAACCATGGCTGTCGGAAAAAACAAGAGGATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAACTGTCGACCCATTTGCAAAGAAGGATTGGTATGATATCA
AGGCACCCTCTGTGTTCACTGTCAAGAACGTTGGAAAGACTCTTGTTACCCGTACTCAGGGTACCAAGATTGCTTCTGAAGGGCTTAAACATAGAGTGTTTGAGGTATCA
CTGGCCGACCTTCAGGATGATGAAGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGAAGAAATGTTCTGACTAATTTCTGGGGAATGAATTTCAC
TACAGACAAGTTAAGGTCATTGGTAAGGAAGTGGCATACGTTGATTGAAGCCCATGTAGATGTTAAGACCACAGATAATTACACTCTGAGGATGTTTTGCATTGGGTTTA
CAAAGAGACGTCCAAACCAAGTCAAAAGGACCTGCTATGCACAATCCAGTCAGATCAGACAGATTCGTCGCAAGATGAGGGAGATAATGGTCAACCAAGCAACATCATGC
GATCTGAAAGAGTTGGTCCGTAAGTTCATTCCTGAATCAATTGGAAAGGATATCGAGAAGGCTACTTCTAGCATATACCCTCTACAGAATGTTTTCATCCGGAAGGTCAA
GATCTTGAAAGCTCCCAAGTTTGATCTCGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTCAAGGTAGACAGGCCTGCTGAAGAACCCGTTGAGG
GTGCTACAGAAGTTGTCGGTGCTTGAAAATGGAATCATGAATCAACTTTCTTATATTTACGAATGAACTGGGGCTTTTAATTTTTTAAAATTTTCTTTTTTTTAGTTATA
GTCTTGTTATGTTTCTGCCAAATTGAGAAATCAGAGATATTCAGCGATTTTGACTATGAAAATACTTGCCGCTTTTTAGTTATGCATTGTACCTTGGATCCATTTGAATA
CAATTATTAAGCGCTCTCATCTTGTTTTATT

Protein sequence

Show/hide protein sequence

MAVGKNKRISKGKKGGKKKTVDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKDIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVDRPAEEPVEGATEVVGA

PI0015645 (gene) of Melon (PI 482460) v1 genome