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PI0015673 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015673
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr01:19958445..19958960
RNA-Seq ExpressionPI0015673
SyntenyPI0015673
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034016.1 hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa]2.6e-4656.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKW+P+ HAS KLIPSYGG   FRGIPLH WN+ TF QIG ACGG + VA+ET    +L+EAK+K+RYNYSGFLP  +   D +GN+++VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         ++ SEGKWL+ERN R+HG+FKR+ A +FD++N  SEQ LF    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.8e-4758.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKW+P+ HAS KLIPSYGG   FRGIPLH WN+ TF QIG ACGG I VA+ET    +L+EAK+K+RYNYSGFLP  +   D +GN+++VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+ SEGKWL+ERN R+HG+FKR+ A +FDD+N  SEQ LF    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.0e-4658.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKWSP  HA+ KLIPSYGG   FRGIPLH WN+ TF QIG AC G I VA+ET    +L+EA+IKVRYNYSGFLP N+   D++GN++ VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+  EGKWLIERN R+HG+FKR+ A +FDD+N +SEQ  F  + AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.8e-4758.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKW+P+ HAS KLIPSYGG   FRGIPLH WN+ TF QIG ACGG I VA+ET    +L+EAK+K+RYNYSGFLP  +   D +GN+++VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+ SEGKWL+ERN R+HG+FKR+ A +FDD+N  SEQ LF    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
TYK23598.1 hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]3.3e-4658Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKWS + HA+ KLIPSYGG   FRGIPLH WN+ TF QIG ACGG I VA+ET    +L+EA+IKVRYNYSGFLP N+   D++GN++ +Q
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+  EGKWLIERN R+HG+FKR+ A  FDD+N +SEQ  F    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
TrEMBL top hitse value%identityAlignment
A0A5A7SVM5 DUF4283 domain-containing protein1.2e-4656.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKW+P+ HAS KLIPSYGG   FRGIPLH WN+ TF QIG ACGG + VA+ET    +L+EAK+K+RYNYSGFLP  +   D +GN+++VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         ++ SEGKWL+ERN R+HG+FKR+ A +FD++N  SEQ LF    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein4.2e-4758.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKW+P+ HAS KLIPSYGG   FRGIPLH WN+ TF QIG ACGG I VA+ET    +L+EAK+K+RYNYSGFLP  +   D +GN+++VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+ SEGKWL+ERN R+HG+FKR+ A +FDD+N  SEQ LF    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein4.2e-4758.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKW+P+ HAS KLIPSYGG   FRGIPLH WN+ TF QIG ACGG I VA+ET    +L+EAK+K+RYNYSGFLP  +   D +GN+++VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+ SEGKWL+ERN R+HG+FKR+ A +FDD+N  SEQ LF    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein9.5e-4758.67Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKWSP  HA+ KLIPSYGG   FRGIPLH WN+ TF QIG AC G I VA+ET    +L+EA+IKVRYNYSGFLP N+   D++GN++ VQ
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+  EGKWLIERN R+HG+FKR+ A +FDD+N +SEQ  F  + AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
A0A5D3DJE1 DUF4283 domain-containing protein1.6e-4658Show/hide
Query:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
        T   + V+ EKWS + HA+ KLIPSYGG   FRGIPLH WN+ TF QIG ACGG I VA+ET    +L+EA+IKVRYNYSGFLP N+   D++GN++ +Q
Subjt:  TCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ

Query:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
         V+  EGKWLIERN R+HG+FKR+ A  FDD+N +SEQ  F    AI P+
Subjt:  TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAGATGCTACTGGAAAGGTGATAACATGTAGAAATTTCTATGTGAAAATTGAAAAATGGTCTCCATCCATCCATGCATCCCAAAAGTTGATTCCTAGTTATGG
GGGTTTGGCTCGTTTCAGAGGAATTCCTTTACATGCATGGAACTTAGATACTTTCCTCCAAATTGGAAATGCATGTGGTGGCTTCATTGCAGTTGCCAAAGAAACTTGGG
AAAAAACTGATTTAGTGGAAGCAAAGATCAAAGTTAGATACAACTACTCGGGTTTTCTTCCGGTTAATATCAACACTATTGATGATAAAGGAAATAGATACATAGTGCAG
ACAGTATCTCAGTCTGAAGGAAAATGGTTGATTGAAAGAAATGGAAGAATTCATGGTTCCTTTAAGAGAGAAGTCGCAGTTAATTTTGATGACTACAACACGAAATCAGA
GCAACTTTTGTTCATCGAAAACGTTGCTATTCCACCGGAAAAATTTGAAAAGAAAAAACAGAGATTTCAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAGATGCTACTGGAAAGGTGATAACATGTAGAAATTTCTATGTGAAAATTGAAAAATGGTCTCCATCCATCCATGCATCCCAAAAGTTGATTCCTAGTTATGG
GGGTTTGGCTCGTTTCAGAGGAATTCCTTTACATGCATGGAACTTAGATACTTTCCTCCAAATTGGAAATGCATGTGGTGGCTTCATTGCAGTTGCCAAAGAAACTTGGG
AAAAAACTGATTTAGTGGAAGCAAAGATCAAAGTTAGATACAACTACTCGGGTTTTCTTCCGGTTAATATCAACACTATTGATGATAAAGGAAATAGATACATAGTGCAG
ACAGTATCTCAGTCTGAAGGAAAATGGTTGATTGAAAGAAATGGAAGAATTCATGGTTCCTTTAAGAGAGAAGTCGCAGTTAATTTTGATGACTACAACACGAAATCAGA
GCAACTTTTGTTCATCGAAAACGTTGCTATTCCACCGGAAAAATTTGAAAAGAAAAAACAGAGATTTCAAAACTGA
Protein sequenceShow/hide protein sequence
MKQDATGKVITCRNFYVKIEKWSPSIHASQKLIPSYGGLARFRGIPLHAWNLDTFLQIGNACGGFIAVAKETWEKTDLVEAKIKVRYNYSGFLPVNINTIDDKGNRYIVQ
TVSQSEGKWLIERNGRIHGSFKREVAVNFDDYNTKSEQLLFIENVAIPPEKFEKKKQRFQN