; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015693 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015693
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:10515014..10520402
RNA-Seq ExpressionPI0015693
SyntenyPI0015693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.7e-8168.75Show/hide
Query:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV
        DRNTVDAAAGGALA+K  TEARELISRMA+NSQ F NRASEL+NSLTKEVSELKSQMLNMTTLL        + + K +  G+VGHPNDKCP+++EE N+
Subjt:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK
        ++KYDP+SNTYN GWRDNP LRWGNDNQ+  QA ++S+NQ TNL+D++KALATNT+SFQ E+KQQM++LT  ISK++GKGKLPAQP+HANVS ISL+SGK
Subjt:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        IL+TPS+ E+KVTS P+ L +K+E KEEK+ET+   S+ K
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.4e-8269.17Show/hide
Query:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV
        DRNTVDA AGGALADK  TEARELIS+MAENSQ+F NRASELDNSLTKEVSELKSQMLNMTTLL        + + K    G+VGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK
        +RKYDPH NTYN+GWRDNP+LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKGKL AQ ++ANVSA+SL+SGK
Subjt:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        IL+TP++ E+K TS P+ L  K+E KEEK+ET+  P +SK
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.0e-8069.46Show/hide
Query:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPLCKVD-----LLKLQNAGVVGHPNDKCPDLVEEANVI
        NTVDAA G ALADKT TEARELISRMA+N Q+F NRASE DNSLTKEVSELKSQMLNMTT L    V      + K    G+VGH N+KCP+++E+ N++
Subjt:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPLCKVD-----LLKLQNAGVVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI
        R+YDPHSNTYN+GWRDNP+LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKGKLPAQ DHANVSAISL+SGKI
Subjt:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        L+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-8168.88Show/hide
Query:  RNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVI
        RNT+D AAGGALADKT TEARELISRMAENS++F NRASELDNSLTKEVSELKSQMLNMTTLL          + K    G+VGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI
        R+YDPHSNTYN+GWRDN +LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ ++KQQM++LT AISK++GKGKLPAQPDHANVSAISL+SGKI
Subjt:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSKGG
        L+TP++ E+K+TS P+ L +K+E KEEK++ S    +++GG
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSKGG

TYK14267.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-7968.49Show/hide
Query:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIR
        NTVDAAAGGALADKT T ARELISRMAENSQ+F N+ASELDNSL KEVSELKSQMLNMTTLL        + + K    G+VGH NDKCP+++E+ N++R
Subjt:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIR

Query:  KYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKIL
        +YDPH NTYN+GWRDNP+LRWGNDNQ+   A S+S+ QGTNLED++KALATNT+SFQ E+KQQM++LT   SK++GKGKL AQP HANVS ISL+SGKIL
Subjt:  KYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKIL

Query:  ETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        +TP+S E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Subjt:  ETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein3.7e-8168.75Show/hide
Query:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV
        DRNTVDAAAGGALA+K  TEARELISRMA+NSQ F NRASEL+NSLTKEVSELKSQMLNMTTLL        + + K +  G+VGHPNDKCP+++EE N+
Subjt:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK
        ++KYDP+SNTYN GWRDNP LRWGNDNQ+  QA ++S+NQ TNL+D++KALATNT+SFQ E+KQQM++LT  ISK++GKGKLPAQP+HANVS ISL+SGK
Subjt:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        IL+TPS+ E+KVTS P+ L +K+E KEEK+ET+   S+ K
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

A0A5A7VQ60 Retrotransposon gag protein4.9e-8169.46Show/hide
Query:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPLCKVD-----LLKLQNAGVVGHPNDKCPDLVEEANVI
        NTVDAA G ALADKT TEARELISRMA+N Q+F NRASE DNSLTKEVSELKSQMLNMTT L    V      + K    G+VGH N+KCP+++E+ N++
Subjt:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPLCKVD-----LLKLQNAGVVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI
        R+YDPHSNTYN+GWRDNP+LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKGKLPAQ DHANVSAISL+SGKI
Subjt:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        L+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

A0A5D3CB46 Retrotransposon gag protein2.2e-8168.88Show/hide
Query:  RNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVI
        RNT+D AAGGALADKT TEARELISRMAENS++F NRASELDNSLTKEVSELKSQMLNMTTLL          + K    G+VGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI
        R+YDPHSNTYN+GWRDN +LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ ++KQQM++LT AISK++GKGKLPAQPDHANVSAISL+SGKI
Subjt:  RKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKI

Query:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSKGG
        L+TP++ E+K+TS P+ L +K+E KEEK++ S    +++GG
Subjt:  LETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSKGG

A0A5D3CQR9 Retrotransposon gag protein5.4e-8068.49Show/hide
Query:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIR
        NTVDAAAGGALADKT T ARELISRMAENSQ+F N+ASELDNSL KEVSELKSQMLNMTTLL        + + K    G+VGH NDKCP+++E+ N++R
Subjt:  NTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANVIR

Query:  KYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKIL
        +YDPH NTYN+GWRDNP+LRWGNDNQ+   A S+S+ QGTNLED++KALATNT+SFQ E+KQQM++LT   SK++GKGKL AQP HANVS ISL+SGKIL
Subjt:  KYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKIL

Query:  ETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        +TP+S E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Subjt:  ETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

A0A5D3CRR8 Retrotransposon gag protein2.6e-8269.17Show/hide
Query:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV
        DRNTVDA AGGALADK  TEARELIS+MAENSQ+F NRASELDNSLTKEVSELKSQMLNMTTLL        + + K    G+VGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPL----CKVDLLKLQNAGVVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK
        +RKYDPH NTYN+GWRDNP+LRWGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ E+KQQM++LT AISK++GKGKL AQ ++ANVSA+SL+SGK
Subjt:  IRKYDPHSNTYNAGWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGK

Query:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK
        IL+TP++ E+K TS P+ L  K+E KEEK+ET+  P +SK
Subjt:  ILETPSS-EEKVTSTPILLENKDEKKEEKLETSSLPSSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTGACAAAACCCTTACTGAAGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTAG
CAACAGAGCATCCGAACTCGATAATTCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACTCTACTACCTTTGTGCAAGGTGGATCTATTAA
AGTTGCAAAATGCAGGTGTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACGCC
GGTTGGAGAGACAACCCTGATCTAAGATGGGGAAACGACAACCAAAGACCTGCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGC
TCTTGCTACTAATACTATCTCTTTTCAGAATGAAGTGAAACAACAGATGTCTCGTCTAACAAATGCCATAAGCAAATTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAG
ATCATGCCAACGTAAGTGCCATCTCGCTTAAAAGCGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAG
AAAAAGGAAGAAAAGTTAGAAACTAGTTCTTTACCATCATCTTCTAAAGGTGGTCCTCTCAAAGTAACAAAATGTGCAGTTTGTGGCTTGGTTGGACATCCAAATGACAA
ATGTCCCGAGTTGGTCGAGGATGTGAATGTTATTCAAAAATATGACCCCCACGGTAATACATACAATTCAGGATGGAGAGACAACCCAAACTTAAGATGGGGGAATGACA
ACCAAAAGCTCACACAAGCAACATCCTCCTCTTTAAACCAAGGTATGAATCTTGAAGACATTGTCAAAGCTTTAGTTACTAACACTCTTTCTTTTCAACAAGAGATGAAA
CAACAAATTACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAAGCAAGCTTCCGACCCAACCGGACCATGTCAACGTGAGTGCTATCTCACTAAGGAGTAGTAA
GATTCTTGACACCCTTACTAGTGAAGACAAAAAGGTAACTCCCAATCCTATCCCTCTTGAGAATAAGAAAAATGAGTCTAAAGAAGAAAAGATTGAAACAACTCCTTTAC
CATCTAATTCTAAAAATGATAAAATTCCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTGACAAAACCCTTACTGAAGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTAG
CAACAGAGCATCCGAACTCGATAATTCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACTCTACTACCTTTGTGCAAGGTGGATCTATTAA
AGTTGCAAAATGCAGGTGTAGTTGGACATCCTAATGACAAGTGTCCTGACCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGTAACACTTACAACGCC
GGTTGGAGAGACAACCCTGATCTAAGATGGGGAAACGACAACCAAAGACCTGCACAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGC
TCTTGCTACTAATACTATCTCTTTTCAGAATGAAGTGAAACAACAGATGTCTCGTCTAACAAATGCCATAAGCAAATTAGAAGGAAAAGGCAAACTTCCGGCTCAGCCAG
ATCATGCCAACGTAAGTGCCATCTCGCTTAAAAGCGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAAAGATGAG
AAAAAGGAAGAAAAGTTAGAAACTAGTTCTTTACCATCATCTTCTAAAGGTGGTCCTCTCAAAGTAACAAAATGTGCAGTTTGTGGCTTGGTTGGACATCCAAATGACAA
ATGTCCCGAGTTGGTCGAGGATGTGAATGTTATTCAAAAATATGACCCCCACGGTAATACATACAATTCAGGATGGAGAGACAACCCAAACTTAAGATGGGGGAATGACA
ACCAAAAGCTCACACAAGCAACATCCTCCTCTTTAAACCAAGGTATGAATCTTGAAGACATTGTCAAAGCTTTAGTTACTAACACTCTTTCTTTTCAACAAGAGATGAAA
CAACAAATTACTCAACTTACTACCGCCATAAGCAAGTTGGATGGGAAAAGCAAGCTTCCGACCCAACCGGACCATGTCAACGTGAGTGCTATCTCACTAAGGAGTAGTAA
GATTCTTGACACCCTTACTAGTGAAGACAAAAAGGTAACTCCCAATCCTATCCCTCTTGAGAATAAGAAAAATGAGTCTAAAGAAGAAAAGATTGAAACAACTCCTTTAC
CATCTAATTCTAAAAATGATAAAATTCCCTCTTAA
Protein sequenceShow/hide protein sequence
MDRNTVDAAAGGALADKTLTEARELISRMAENSQNFSNRASELDNSLTKEVSELKSQMLNMTTLLPLCKVDLLKLQNAGVVGHPNDKCPDLVEEANVIRKYDPHSNTYNA
GWRDNPDLRWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEVKQQMSRLTNAISKLEGKGKLPAQPDHANVSAISLKSGKILETPSSEEKVTSTPILLENKDE
KKEEKLETSSLPSSSKGGPLKVTKCAVCGLVGHPNDKCPELVEDVNVIQKYDPHGNTYNSGWRDNPNLRWGNDNQKLTQATSSSLNQGMNLEDIVKALVTNTLSFQQEMK
QQITQLTTAISKLDGKSKLPTQPDHVNVSAISLRSSKILDTLTSEDKKVTPNPIPLENKKNESKEEKIETTPLPSNSKNDKIPS