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PI0015702 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015702
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr06:12532669..12533432
RNA-Seq ExpressionPI0015702
SyntenyPI0015702
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP95586.1 ATP-dependent clp protease proteolytic subunit 3 chloroplastic [Phtheirospermum japonicum]3.0e-1343.75Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMISW-------------------------------RKSNRDEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDG
        MGAFLLASGS  KRFCMPN R+MI                                 R + + EH      I+L+TDRD+ MN W+A EYGL+++VIDDG
Subjt:  MGAFLLASGSNEKRFCMPNGRMMISW-------------------------------RKSNRDEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDG

Query:  KRGFIAPIAETS
        K G +APIA+ S
Subjt:  KRGFIAPIAETS

KAA0060718.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa]1.8e-1349.53Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

XP_008457103.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]1.8e-1349.53Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

XP_022948597.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita moschata]3.0e-1348.6Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLA+GS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

XP_022997788.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita maxima]1.3e-1349.53Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

TrEMBL top hitse value%identityAlignment
A0A1S3C615 ATP-dependent Clp protease proteolytic subunit8.5e-1449.53Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

A0A3Q0EXE0 ATP-dependent Clp protease proteolytic subunit1.9e-1350.62Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMISWRKSNRDEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFIAPIAETS
        MGAF+LASG+  KR+CMPN R+MI                IDL+TDRD+ MN W+A EYGL++ VIDDGK G +AP+ + +
Subjt:  MGAFLLASGSNEKRFCMPNGRMMISWRKSNRDEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFIAPIAETS

A0A5A7UZN2 ATP-dependent Clp protease proteolytic subunit8.5e-1449.53Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit1.5e-1348.6Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLA+GS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

A0A6J1KEX5 ATP-dependent Clp protease proteolytic subunit6.5e-1449.53Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KRFCMPNGR+MI              S R      H    N             I+L+TDRD+ MN W+A EYGLI++VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRN------------CIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAETS
        APIAE +
Subjt:  APIAETS

SwissProt top hitse value%identityAlignment
A1K783 ATP-dependent Clp protease proteolytic subunit8.2e-0635.87Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI-------SWRKSNRDEHT-------------------DTRNCIDLNTDRDSVMNLWKATEYGLINKVI
        MGAFLLA+G   KRFC+PN R+MI         + S+ + H                     T   I+ +TDRD+ M+   A EYGL++KV+
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI-------SWRKSNRDEHT-------------------DTRNCIDLNTDRDSVMNLWKATEYGLINKVI

A3QFX6 ATP-dependent Clp protease proteolytic subunit1.1e-0535.71Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMISW-----------------------RKSNR---DEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRG
        MGAFLLA G+  KR C+PN R+MI                          K N+   D        I+ +TDRD+ M+  +A EYGL++ V+D  KRG
Subjt:  MGAFLLASGSNEKRFCMPNGRMMISW-----------------------RKSNR---DEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRG

A4Y5I2 ATP-dependent Clp protease proteolytic subunit1.4e-0536.73Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI-----SWRKSNRD--------------------EHT-DTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRG
        MGAFLLA G   KRFC+PN R+MI      ++    D                    EHT      I+ +TDRD+ M+  +A EYGL++ V+   KRG
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI-----SWRKSNRD--------------------EHT-DTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRG

Q9K709 ATP-dependent Clp protease proteolytic subunit 16.3e-0636.46Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI-----SWRKSNRDEHTDTRNCIDL---------------------NTDRDSVMNLWKATEYGLINKVIDDGK
        MGAFLLA+G+  KRF +PN  +MI       R    D    TR  +++                     +TDRD+ M   KA EYGLI+KVI+  K
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI-----SWRKSNRDEHTDTRNCIDL---------------------NTDRDSVMNLWKATEYGLINKVIDDGK

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic1.5e-1243.81Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRNC------------IDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KR+CMPN ++MI              S R      H    N             I+ +TDRD+ +N W+A EYGLI+ VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRNC------------IDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAE
        API +
Subjt:  APIAE

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 54.6e-0434.78Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMIS---------------------WRKSNRD----EHT-DTRNCIDLNTDRDSVMNLWKATEYGLINKVI
        MGAFLL++G+  KR+ +PN R+MI                        K+N +     HT  +   I+ +TDRD  M+  +A EYGLI+ VI
Subjt:  MGAFLLASGSNEKRFCMPNGRMMIS---------------------WRKSNRD----EHT-DTRNCIDLNTDRDSVMNLWKATEYGLINKVI

AT1G66670.1 CLP protease proteolytic subunit 31.1e-1343.81Show/hide
Query:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRNC------------IDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI
        MGAFLLASGS  KR+CMPN ++MI              S R      H    N             I+ +TDRD+ +N W+A EYGLI+ VIDDGK G I
Subjt:  MGAFLLASGSNEKRFCMPNGRMMI--------------SWRKSNRDEHTDTRNC------------IDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFI

Query:  APIAE
        API +
Subjt:  APIAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCATTTCTTCTCGCTTCTGGTTCAAATGAAAAGCGATTCTGCATGCCCAATGGAAGAATGATGATCAGCTGGAGGAAAAGCAACAGAGATGAGCATACGGATAC
GAGAAATTGCATTGATTTGAACACAGATCGCGATAGTGTTATGAACCTTTGGAAAGCTACTGAATATGGTTTGATCAACAAAGTTATCGATGATGGAAAGCGAGGGTTTA
TTGCTCCAATTGCAGAGACAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCATTTCTTCTCGCTTCTGGTTCAAATGAAAAGCGATTCTGCATGCCCAATGGAAGAATGATGATCAGCTGGAGGAAAAGCAACAGAGATGAGCATACGGATAC
GAGAAATTGCATTGATTTGAACACAGATCGCGATAGTGTTATGAACCTTTGGAAAGCTACTGAATATGGTTTGATCAACAAAGTTATCGATGATGGAAAGCGAGGGTTTA
TTGCTCCAATTGCAGAGACAAGTTAA
Protein sequenceShow/hide protein sequence
MGAFLLASGSNEKRFCMPNGRMMISWRKSNRDEHTDTRNCIDLNTDRDSVMNLWKATEYGLINKVIDDGKRGFIAPIAETS